Solea senegalensis (Senegalese sole): 122770803
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Entry
122770803 CDS
T07721
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04120
Ubiquitin mediated proteolysis
ssen04137
Mitophagy - animal
ssen04144
Endocytosis
ssen04340
Hedgehog signaling pathway
ssen04350
TGF-beta signaling pathway
ssen04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122770803
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122770803
04350 TGF-beta signaling pathway
122770803
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122770803
04137 Mitophagy - animal
122770803
09144 Cellular community - eukaryotes
04520 Adherens junction
122770803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122770803
04121 Ubiquitin system [BR:
ssen04121
]
122770803
03029 Mitochondrial biogenesis [BR:
ssen03029
]
122770803
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122770803
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122770803
Autophagy
Mitophagy
Other mitophagy associated proteins
122770803
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
HECT type E3
122770803
Mitochondrial biogenesis [BR:
ssen03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122770803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
122770803
NCBI-ProteinID:
XP_043883863
LinkDB
All DBs
Position
LG6:complement(8671937..8732750)
Genome browser
AA seq
778 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGCKYQRLDLN
KLGPNDNDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNH
ITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASGPPGEQRIQERRVRS
QRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEE
LGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPTPNGSRVAMESQNTN
LSHPIQLKDQIGPPVPPPQVLSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQA
GHCRIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEML
NPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYK
QLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKS
IPVTEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPEHLLKSFDEKELELIVCGLG
KIDISDWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQ
GAAGPRLFTIHQIDANTNNLPKAHTCFNRIDIPPYESYEKLYDKLLTAIEETCGFAVE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttaggagaaatggcccagtaaagctgcggttaacagtcttgtgt
gcaaagaacctggcaaagaaagacttcttccggttgccagatccttttgccaaagtggtg
gtggatgggtcaggacaatgccactctacagatactgtgagaaatacgctggacccaaag
tggaatcaacattatgatctatacattggaaaggcagactccatcaccatcagtgtatgg
aaccacaagaagatccacaagaagcagggtgccggtttcctgggctgtgtacgccttctg
tccaatgccatcaacagattaaaggacactggctgtaagtatcagagactcgacctgaat
aaactgggccccaatgacaatgatactgtgagaggacagattgtagtaagtctacagtcg
agagatcgcattggatcaggagggcctgtggtggactgcagtcgtctcttcgacaatgac
ttacctgacgggtgggaagagaggaggacagcttctggaaggatacagtatttgaaccac
ataacacgtaccacacaatgggagagacctaccaggccagcgtctgagtattccagccca
tcaggacgtccgcttagctgcgtggtggatgaaaacacaccagtgatgacgcctgttaat
ggggctgaggccagtggtccaccaggtgagcagcggatccaggagagacgggttagatcg
cagcgacaccgcaactacatgagtcggacgcacctgcatacgccgcctgacctgcctgag
ggttatgagcaaagaacaactcagcagggtcaggtctatttcctccacacacagacagga
gtcagtacctggcatgacccccgggtacccagggacctaagcaatgtgaactgtgaggag
cttggccctctgccccccggctgggagatcagaaacacagccactggccgtgtctacttt
gtggaccataacaatcgaacaacacagttcacagacccacgactgtctgccaacctgcat
ctagtgctcaacccaactccaaatggttcccgtgtggccatggagagccagaacactaac
ctcagtcatcccattcagttgaaggaccagattggtcctcctgttccccctccgcaagtt
ctgtcaccagcccagttacctgaagaagcagagtgcctgacagtgcccaaatacaagaga
gacctggtgcagaagctgaagatcctgcggcaggaactgtctcaacaacaaccccaggct
ggtcactgccgcatcgaggtctgtcgagaggagatctttgaggagtcgtaccgacaagtg
atgaagatgcgtccaaaggatctgtggaaaagactgatgattaagttcagaggagaggaa
ggactggactatggtggcgtagctagggaatggctatatctgctatcccatgagatgctg
aacccgtactacggcctattccagtactccagagatgacatctacactcttcagattaac
ccagactctgctgtcaacccggagcatctgtcgtatttccactttgtgggtcgtatcatg
ggaatggctgtgttccacggccactacattgatggaggcttcactctgcccttctacaaa
cagctgctgggtaaaccgatcacgctggatgatatggagtctgttgatcctgacctccac
aacagcctcgtctggattctggacaatgacatcactggtgtcctggaccacactttctgt
gtagagcataatgcttacggagagattatccaacatgagctgaaacctaatggcaaaagt
attcctgtcacagaggacaccaagaaggagtatgtcaggttgtatgtgaattggcgtttc
ctgcatggcatcgaggctcagtttttggccttgcagaaaggcttcaatgaggtcatccct
gaacaccttcttaaatcctttgacgagaaggagctggagctgatcgtgtgcggcctggga
aagatcgacatttcagactggaagtctaacacccgtctgaagcattgcacccctgacagc
aacatcgtgaagtggttttggaaagctgtggagtcgttcgacgaggagaggagggcacga
cttctgcagtttgttactggctcgtccagagtcccactgcaaggctttaaagctttacag
ggtgctgcaggtcccagactcttcaccattcatcagatcgatgccaacaccaacaacctg
cccaaagcccacacctgctttaatcggattgacattccgccctacgagagctacgaaaag
ctgtatgacaagctgctaacggccatcgaggagacctgtggcttcgcagtggaatga
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