Solea senegalensis (Senegalese sole): 122770896
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Entry
122770896 CDS
T07721
Name
(RefSeq) THO complex subunit 4-like isoform X1
KO
K12881
THO complex subunit 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
ssen03040
Spliceosome
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122770896
09122 Translation
03013 Nucleocytoplasmic transport
122770896
03015 mRNA surveillance pathway
122770896
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122770896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122770896
03041 Spliceosome [BR:
ssen03041
]
122770896
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122770896
TREX complex
122770896
Spliceosome [BR:
ssen03041
]
Complex C
Other components
EJC/TREX
122770896
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122770896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_10
RRM_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122770896
NCBI-ProteinID:
XP_043884038
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All DBs
Position
LG6:2450560..2454276
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AA seq
259 aa
AA seq
DB search
MADKMSMSLDDIIKMNKKGGGGRGGGGGGSRSGASSGRARGSSRPMRGRQNNFNRERNSR
PAPYTRPRELPDKWQHDMFEEDAGIRRRPTEVAERSVESSGKLLVSNLDFGVSDSDLKEL
FSEFGPLKKTSVHYDRSGRSKGSADVHFENKADALKAMKHYNGVPLDGQPMKIQQVSSEA
DVYSRPSTQSGFDRSRLGQPRFERRERGEQRQGGGGGGGGGGYRGRGRGRGAGNRPQLSA
EELDAQLDAYNAKFQMDTS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaatgagcatgtctctggacgacattatcaagatgaataagaaaggaggc
ggcggccgtggtggtggcggtggaggatccaggtccggcgcgagttcaggtcgggcccgt
ggttcgtcgaggccaatgcggggccgacagaacaacttcaaccgcgagagaaacagccga
cccgcaccgtacacccggcccagagagttgccagacaaatggcaacacgacatgtttgag
gaggacgctggtatacgcagaagaccgaccgaagtagctgaaagaagtgtagaaagcagt
ggcaagctgctggtttccaatctggactttggggtctctgactcagatctgaaggagctt
ttttccgagtttgggcccctaaagaaaacgtccgtacactacgaccgctctggccgcagt
aaaggatcagcagatgtccactttgaaaataaggcagatgcacttaaagccatgaagcac
tataatggtgttccccttgatggtcagcccatgaagatccagcaagtgtcctcagaggct
gatgtgtacagtagaccatcaacacaaagtggttttgaccggagcagactcggtcaaccc
cggtttgaaaggagggaacgtggtgaacagagacaaggtggtggtggtggtggtggtggc
ggcggatacagagggcgaggaagaggacgaggagctggaaacagacctcaactctctgca
gaagagctggatgcccagttggatgcttacaatgcgaagtttcagatggacaccagttag
DBGET
integrated database retrieval system
