Solea senegalensis (Senegalese sole): 122771007
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Entry
122771007 CDS
T07721
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122771007 (lrba)
Membrane trafficking [BR:
ssen04131
]
Endosome - Lysosome transport
Others
Others
122771007 (lrba)
Endosome - Golgi transport
122771007 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122771007 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR75_1st
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
KNTC1_N
EIF3I
SUKH_6
Motif
Other DBs
NCBI-GeneID:
122771007
NCBI-ProteinID:
XP_043884199
LinkDB
All DBs
Position
LG6:complement(23638356..23800488)
Genome browser
AA seq
2955 aa
AA seq
DB search
MASEETAVPPSADGKDGRPGTMAHNPGVPIRGIRMKFAVLVGLVEVGEVSNRDIVETVFN
LLVGGQFDLEMNFIIQEPDSIVCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTDV
GLIQQILQRIATTDSMIADLLVDTLGVLASYSITVKELKLFFSKLQGQEGQWPRHAVKLL
SVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKDK
PYLYCFRTSKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHVYNRW
KNSEISCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEAL
SPAQILAIYQLGPGYQGTFKHKAESDLLFAEHHKTLLYDGKLSSSIAFTYNPRATDAQLC
LESSPKDNLSIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYRQPSSL
ELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIVLAF
SRYLSNLQNGILLLKQLCDHILFNPVIWIHAPAKVQLTLYTYLATEFISTVTIYNAIRRV
GTVLQVMHTLKYYYWVVNPHDRSGVIPKGLDGPRPNHKEILSLRAFLLLFVKQLIMKDYG
VKDDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPGSLVQAFDQRNGIRVIYKLLASK
SEAIRVQALKVMGYFLKHLPPKRKSDVMLSHGLFSLLTERLMLHSSQFSMTTYNVLFEIL
TEQICTQVIHKQHPDPDSTVKILNPHILKVIAALLKNAPPSPESMEVRRFFLSDMIKLFN
NSRENRRSLLQCSVWQEWMLSLCFINPRNSEEQKITEMVYAIFRILLYHAIKYEWGGWRV
WVDTLSITHSKVTFEQHKENLSRMFSQYQRHDSAGSPNAIRTVSGVSQSSETMDCVNGSS
AEEAAPSTVIELRVDELSLTSPESASSPTVTPSQLETVDQRGHAAITVSNILARSEDDEK
KLCQGSSRDGSGDGHETEVTTTQADTETQSEETDKQEAVTVSSADDDDGPQTSATDSSET
VDSKAVEVVGDSCTPPASGDAQTPADDEKRESEHNKGESSNSMTEDSLNEGDAEPAVVSK
PDVETDQMPPKTEACQENRGLGGASIHNEDLVDMSSVSDQTHPSDVDGSQEESSFTSAAA
GEEGQVLKEDVEKHADDEGNKSDQDGKELKTSDEKDENITKDGESEASKLEQTSPVETSE
QSVTEASKEKVEDDQSSTIEETVTSDQQPTTDTTDTTLPSVDAAEGTDSTSARQPSETIG
TTGEETLATAPESSTTVSSSDTQKKPDSVSKTKEIKIARLDVSNVALDTERLELKGTTPT
TEMSQGQSAAAAAAAGSSSGQPTREGSTSAPRSTMFRIPEFRWSHMHQRLLTDLLFSIET
DVQMWRSHSTKTILDFVNSSENVVFVHNSIHLISQVVDNLIMACGGILPLLSAATSSSHE
LENIEPSQGLTVEASVTFLQRLINLVDVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVC
AMAVRNCLECQQALCKHGSECTARNYAAAPSAAIGTSKSVSAQSPVDAVTGGMSPVRDLD
RLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKKHPQRS
QSSRSTDNIATAGGLEVENGVSLRRYDSGIGDDHTSTAASEAELSSSSATHGPDAISEAL
STLSSEVRPALPSDSKGKNVKDILRSLVSAPGDDILVDPSLLPPAFLGSVDDAAREQSIS
FDRSVIVAPKKAGMASLPSMSTPVPAVTAASVSAGTPMDSVAVVSSGDASESISAEAAAS
GGQVPGSSSLPSVPPLSPVTQNTAPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLL
GSHGQELLIEGTSLMCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHT
MKDHLVRVANEAEFILSRQRAEDIHKHAEFESNCAQYAADKRDEEKMCDHLIRAAKYRDH
VTATQLIQKIVNILTDKHGAWGKSSISRPREFWRLDYWEDDLRRRRRFIRNPFGSAHSEA
TLKAAAEHVADITASEEDILKGKQSIRSHALGNQNSESETSLDVDDDTLSSLDEKDLENL
TGPVNLSTGAQLVAPAVVVKGTLSITASELYFEVDEDEPGFKAIDPKILTYTEGLHGKWL
FTEIRAIFSRRYLLQNTALEIFLANRTAVMFNFPDAATVKKVVHSLPRVGVGTNFGLPQT
RRISLATPKQLFKASNMTQRWQRREISNFEYLIFLNTISGRTFNDLNQYPVFPWVITNYD
SEELDLTLPSNFRDLSKPIGALNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTASFTMMW
LLRIEPFTTFFLNFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNA
NSYNLGVMDDSTRVSDVELPPWAKSPEDFVRINRLALESEFVSCQLHQWIDLIFGYKQQG
PEATRALNVYYYLTYEGAVNLSSITDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQ
VYLLLQTPMMFTDQMQQDVIMVLKFPSNSPVTHVAANTQPGLTSPAIITVTANRIFAVNK
WHGLAGHQGSTVQDQPYQLPVEIDPLIASYVGSHRRQISDLLDQSIQISSQCFVITADNR
FILLCGFWDKSFRVYSTDTGKLTQIVFGHRDVVTCLARSESYIGGDCYVLSGSRDATLLL
WYWNGKHCSIGESLGTEFTTPRAILTGHDCEVTCATVCAELGLVISGCKEGPCLIHSMNG
DLLRTLEVPEQCTRPRLIQASTEGHCMVYYDKGHFCLFTVNGKLLGHMEVEDSIKAMLLS
RDGQYLLTGGDGGVVSVWQVHSLKQLFTYPGCDAGVRSMAISHDQRCIITGMASGSIVLF
YNDFNRWHHEYQTRY
NT seq
8868 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacagcagtgccgccgtcagctgatgggaaggacgggagacctggc
accatggcacacaaccccggggtgcccatcagggggatccggatgaagttcgccgtgctc
gttggcttggtggaagttggggaagtttccaaccgagacattgtggagactgtgttcaac
ctgttggttggtggccagtttgacctggagatgaacttcattatccaggagccggatagc
atagtgtgcatggtggagttgctggataagtgtgagcccacctgtcaggcggaggtctgg
agcattttcactgccatcctcaagaagagtgtccgcaacctgcaggcgtgcacagatgtg
ggcctcatccagcagattctccagcgtatagccaccacagacagcatgatcgcagacctg
cttgtggacacgttgggtgtgctcgccagctacagcatcaccgtaaaggagctgaagctt
ttcttcagcaagcttcaggggcaggaaggccagtggcctcgtcatgcagttaagcttttg
tcagtgctgaagtacatggctcacagaaatggccctgactcctttttcagcttcccagga
aaaaatgcagctgcgatagcgctgcctcccatagcaaagtggccgtaccagaatggcttt
acattccacacgtggctccgcatggatcctctcaacaacatcaatgtagacaaagacaag
ccgtacctatactgtttccgcaccagtaaaggcctaggttactctgcgcactttgtgggc
ggctgtttgatagtgacctcattaaaatccaagggaaaaggattccagcactgtgtaaaa
tacgacttcaaaccacagaagtggtacatggtgacccttgttcacgtctacaatcgctgg
aaaaacagtgaaatcagctgctacgtgaacggggaactggcttcctttggagacattgcc
tggttcgtcaacaccagtgacacgtttgacaagtgtttcctgggatcgtcagagacggca
gatgccaaccgtgtgttctgtgggcagatgggagcggtttacctgtttggagaggctcta
agtcccgctcagatcctggccatctatcagctgggtccaggttaccagggcacgttcaag
cacaaagctgagagtgacctgctgtttgcagagcatcataagaccttactgtatgacggc
aaactgtcctctagtatcgccttcacctacaacccccgcgccacagatgctcagctctgc
ctcgagtcctcccctaaggacaacctctccatttttgtccattcccctcatgcactcatg
cttcaggacgtgaaggctgtggtgactcactctgtccagagtggtatacactcgattggc
ggcgtgcaggtcctctttcctttgtttgcacagttggattatcgccagccttccagcctt
gagctggacacttctgtctgctgcactttgctgtcctttgtgatggagctcttgaagaac
tcggtggcgatgcaagaacaggtcctggcctgtaaaggcttcctcgtcattggctacact
ttggagaagtcttccaaggtgcatgtgacgcggcccgtcctggacattgtgctggccttt
tccagataccttagcaacctgcaaaatggcatcttgctgctcaagcagctgtgtgaccac
attctgtttaaccccgtcatctggatccacgcccctgccaaggtgcaactgactctctac
acttacctggcgacagagttcatcagcacagtgaccatctacaatgctattcgcagagtg
ggcactgtgctccaggtcatgcatacactgaagtactactactgggttgtcaacccacat
gaccgcagtggggtcattcccaaaggccttgatggtccgaggccaaaccacaaggagatc
ctgtctctgcgagcgtttctgctgctgtttgtcaaacaactcatcatgaaggattatgga
gtcaaagacgacgagctccagagtatcctcaactacctcctcaccatgcacgaggacgac
aatctcatggatgtactgcagttgctggtggctttgatgtctgaacacccagggtcattg
gtgcaggcttttgaccagcgcaatgggattcgtgtgatttacaagcttttggcctctaaa
agtgaagcaatacgagtgcaggcactcaaagtaatgggctactttctgaaacacttgcca
ccaaagaggaaatctgatgtcatgctgagtcacggcctcttttccctgctcactgaacgc
ctgatgctgcactcgagccagttctccatgacaacctacaatgtgctctttgagatcctc
acagagcagatctgcactcaagtgatccataaacagcatccggaccccgactccacagtg
aagattctcaacccacatattctgaaggtaatagccgctctgctgaagaacgctcccccg
tctcccgagagcatggaggtgcgcaggttttttctgtcagacatgatcaaactgttcaat
aacagccgagagaaccgcaggagcctgctgcagtgctccgtgtggcaggagtggatgctc
tctctgtgcttcatcaacccgcgaaacagcgaggagcagaaaatcacggagatggtgtac
gccatcttccgtatcctgctctaccacgccatcaaatatgagtggggtggctggcgcgtc
tgggtggacaccctgtccatcacccattccaaggtgaccttcgagcagcacaaggagaat
ctgtctcgcatgttcagtcagtaccagcgacacgattctgcaggctctcccaacgcgatc
cgaaccgtctctggtgtgagccaaagctctgagaccatggattgtgttaatgggtcatct
gcagaggaggcggccccttccactgtcattgagctccgagtggacgaactgtccctgaca
tctcctgagtcggcgtccagtcctaccgtcacccctagtcaactggagactgtcgatcaa
aggggacacgcagccatcactgtgtccaacatcctggcaaggtctgaggacgatgagaag
aaattgtgtcaagggtcttccagagacggctcaggcgatggacatgagacagaagtaacc
acaacacaagcagatacagaaacacagagcgaagagacggataaacaggaagctgtgacc
gtgtcctccgctgatgacgatgatggtccgcaaacatctgccactgactcgtctgaaaca
gtggactcaaaagcagtggaggttgtcggagactcctgtactccacctgcaagtggcgat
gcacaaacaccagcagatgatgagaaacgtgagagtgaacacaacaaaggtgagtcatca
aactccatgacagaagactctttaaatgaaggagatgcagaaccagcagtggtttcaaaa
ccagatgttgagactgatcaaatgcctcccaagaccgaagcctgtcaagagaatcgcggg
ctgggcggagcttccatccacaatgaagacctggtggacatgtcatctgttagtgaccag
acccacccgagtgatgttgacggaagccaagaggagtcctcttttacgtctgctgctgct
ggagaggaaggccaagtattaaaggaggacgtcgagaaacacgcagatgatgaaggtaac
aaaagcgatcaggatggaaaggagcttaaaacaagtgacgaaaaagacgagaacatcaca
aaagacggagagagtgaagcctccaagttggagcaaacgtctccagtagaaacatctgaa
caaagtgtgacagaagcatccaaagaaaaagttgaagatgatcagtcttctaccatcgag
gaaaccgttacttcagatcagcagcccaccacagacaccacagacaccacattaccatct
gtagacgctgcagagggaacagactcaacctcagctcgtcagccttcggagaccattggc
accactggagaggaaaccttggccactgctccagaaagcagcaccactgtctccagctct
gacactcaaaagaaaccagactctgtcagtaagaccaaagagattaaaatcgccagactg
gatgtgtctaatgtggccttagacaccgagagacttgaactgaagggcaccactccaaca
acagaaatgagccaaggccagtcagcagcagcagcagcagcagcaggaagttcttcaggt
cagccaaccagagagggcagcacctcggctccgcgctccaccatgtttcgtatcccagag
ttccgatggtcccacatgcatcaacgcctcctcactgacctgttgttctctatcgagaca
gacgtccagatgtggaggagtcactccacaaagacaattctggactttgtgaacagcagc
gagaacgtcgtgtttgtccacaacagcatacacctcatctctcaggtggtggacaacctc
atcatggcttgtggaggcattttgcctctgctgtctgctgccacctcctcctctcatgaa
ctggagaacattgagccatcccagggtctgacagtggaggcctcagtcaccttcttacag
cgcctcatcaacctggtggatgttctcatctttgcaagctccctcaacttcacagagatc
gaggcagagaaaaacatgtcgtcgggaggcatcctccgacagtgtctgcgtcttgtgtgt
gcaatggcagtgagaaactgtctggagtgtcagcaagccctatgtaagcacggctcggaa
tgcacagcgcgcaactacgcagccgcgcccagcgctgcgattggaacgtccaagtctgtg
tctgcgcagagtcccgtcgacgcagtgacaggtggaatgtctccagtccgagacctggac
cgactgctgcaggacatggacatcaaccgccttagggctgtcgtcttcagagatattgag
gacagtaagcaggcgcagtttctggctcttgccgtcgtgtacttcatctcggtcctcatg
gtgtccaagtaccgtgacatcctggagccgcacaatgataagaaacaccctcagcgctcc
cagtcttccaggagcacagacaacatcgccactgccggtggactggaagtggaaaacggc
gtctctctccggcggtatgactccggcatcggcgacgaccacacctcgaccgcggcgagc
gaggcagagctgtcgtcgtccagcgcgacgcatggcccggacgccatctcggaggccctg
tccacgctgtcgtctgaggtcagacccgcgctgccctctgattcaaagggcaagaatgtg
aaggacattctgcgcagcctcgtgagtgctccgggtgatgacatcctggtggacccaagt
ctgctgccgcctgcgttcctaggcagcgtggacgacgcggcccgagaacagtccatttcc
tttgatagaagtgtcatcgttgcacctaagaaagcaggcatggcgtcattgccgagcatg
tccactcccgtcccagcagtgactgctgcctctgtgtccgctgggacacctatggacagc
gtcgctgtggtgtcttctggtgacgcctccgagagcatctctgctgaagctgcagcttca
ggcggccaggttccaggcagctctagcctgccatctgtccccccactctcccctgtgacc
cagaacacagcccccaatatgagtatctcggagcgtttggagcatgctctggagaaggcg
gctcctctgctgagagagatttttgtggactttgcccccttcctctctcggaccctgctg
ggcagccacggacaagagctccttattgagggcacaagcctgatgtgtatgaagtccagc
agctcggtagtggagctcgtcatgcttctgtgttcacaggaatggcagaactccatccag
aagaacgcaggccttgcctttatcgagttggtcaacgaaggcagactgttgagtcacacc
atgaaagaccacctggttcgagtggccaacgaagctgaatttatcctcagccgacagaga
gctgaagacatccacaaacatgcagaatttgagtctaactgtgcccagtacgcggccgac
aagcgagatgaggagaaaatgtgtgaccacctcatccgagcggccaagtaccgtgaccac
gtgaccgccacgcagctcatccagaagatcgtcaacatcctgaccgacaaacacggagcc
tggggaaagtcttccataagccggccgagggagttctggcgcctggactactgggaggac
gatttaaggcggcgacgccgtttcatcaggaacccctttggatccgctcactcagaggcg
acgctcaaagccgcggccgaacacgtggctgatatcactgcatccgaggaggatattctc
aaaggcaagcagtccatcaggagtcatgctctgggaaatcagaactcggagagtgagaca
tcacttgacgtggatgatgacactctgtccagtttggacgagaaggacctggagaattta
acaggcccagtaaacctgagcaccggcgcgcagctggtggctccggctgttgtggtgaaa
ggaactctgtccatcaccgcgtccgagctctacttcgaggtggacgaggacgagccgggc
ttcaaggccatcgatcccaagattctaacctatactgaaggccttcatggaaaatggctg
ttcacagagatccgcgccatcttttccagacgctacctgcttcagaatactgctctggaa
atctttctggccaacaggacggcagtcatgttcaatttcccagatgctgccaccgtgaag
aaggtggtccacagtcttcctcgtgtcggggtgggcacgaactttgggcttccacagacc
aggagaatctccctggccacgccaaagcagctgttcaaagcgtccaacatgacccagcgc
tggcagcgtcgggaaatctccaactttgagtacctcatcttcctcaacacaatctctggt
cgcacctttaatgaccttaaccagtaccctgtcttcccgtgggttatcaccaactatgac
tcagaagaacttgacctcactctacccagcaactttagagatctgtctaagcccattggt
gcgctgaatcctaagagagcagcattcttttcagaccggtatgagtcctgggaggatgat
caggtaccaaagttccactatggcacccactactccaccgccagcttcaccatgatgtgg
ctactccgcattgagcccttcaccaccttcttccttaacttccaaggaggaaagtttgac
catgctgaccgcaccttctcttcagtgtcacgggcctggaggaactgccagagagacacg
tctgatgttaaggagctgatcccagagttctactaccttcctgagatgtttgtcaatgcc
aacagttacaacctgggggtgatggacgacagcaccagggtctctgacgtggagctgccg
ccctgggccaagagcccggaggattttgttcgaatcaatcgcctggctctggagagtgag
tttgtgtcctgccagctccaccagtggatcgatctgatcttcggctacaaacagcaggga
cctgaagccaccagagccctgaatgtctattattatctgacctatgaaggcgcagtcaac
ctcagctccatcactgatccaatgctcagagaggctgtggaatctcaaatcaggagtttt
ggacagacgccctgccagttgctcatcgagccacacccaccccgaagctcggccatgcaa
gtgtatcttctcctgcagaccccgatgatgttcacggaccagatgcagcaggacgttatc
atggtgctcaagttcccgtccaactctcccgtgacccacgtagcagccaacacccagcca
ggtctgacgtcacctgccatcatcactgtcaccgccaaccgcattttcgcggtcaacaaa
tggcacggtttggcaggtcatcagggctcaacggtgcaggaccagccgtaccaacttcct
gtggaaattgacccgctcatagcgagttacgtcggcagtcatcggcgtcagatctcagac
ctgctggatcagagcattcagatcagctcgcagtgcttcgtcatcacagccgacaaccga
tttattcttctgtgcggattctgggacaagagcttccgggtttactccactgacacaggc
aaactgactcagatagtgtttggccaccgtgacgtggtgacgtgcctggcgcgctccgag
tcgtacatcggaggagactgctacgtcctgtcaggctccagagatgccaccctgctgctg
tggtactggaacggaaagcactgcagcatcggagagagcctcggcacagagtttaccaca
ccgcgggccatcttgactggccacgactgtgaagtgacgtgtgctactgtgtgcgcggag
ctgggtctggtcatcagcggctgcaaagagggcccttgtctgatccattccatgaatggg
gacctgctgaggaccctggaggtcccagagcagtgcactcggccccgtctcatccaggcc
tccaccgagggacactgcatggtctattacgacaagggacacttttgtctcttcaccgtc
aacggcaaactcctgggacacatggaggtagaagacagcatcaaggccatgcttctgagt
cgtgacggtcagtacctgctgacgggtggagatggaggagtcgtgtcagtctggcaggtc
cacagtctcaagcagctcttcacgtatcctggctgtgacgcgggagtccgatccatggcc
atttcacacgaccaaaggtgcatcatcaccggcatggcgtctggaagtatcgtgctcttc
tacaacgacttcaacaggtggcaccacgagtaccagaccaggtactga
DBGET
integrated database retrieval system
