Solea senegalensis (Senegalese sole): 122771123 Help Entry 122771123         CDS       T07721                                  Symbol pdcd11 Name (RefSeq) protein RRP5 homolog isoform X1   KO K14792   rRNA biogenesis protein RRP5 Organism ssen  Solea senegalensis (Senegalese sole) Brite KEGG Orthology (KO) [BR:ssen00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:ssen03009]     122771123 (pdcd11) Ribosome biogenesis [BR:ssen03009]  Eukaryotic type   90S particles    Other 90S particles     122771123 (pdcd11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  S1_RRP5 S1 Spt6_S1 HAT_PRP39_C HAT_PRP39_N HAT_Syf1_CNRKL1_N Suf TPR_14 OB_RRP5_4th HAT_Syf1_CNRKL1_C TPR_19 UTP6_C TPR_16 ARM_TT21 TPR_CcmH_CycH ARM_TT21_5th TPR_17 TPR_15 Ig_NUP210_15th Motif Other DBs NCBI-GeneID:  122771123 NCBI-ProteinID:  XP_043884415 LinkDB All DBs Position LG6:complement(7244630..7260902) Genome browser AA seq 1815 aa AA seqDB search MASLEEDFPRGGSAKKPTKSTIVVQRPEVDNLFQSNEQAETKKRRATIKDDVKKVKKQKT GKEKDGLTLNTAAKCVEILHAKNVKEGMLMLGCVKEVTDFEVTVSLPCGLQGFLSIKNVS DSYTKLLSEQLDSTDTEEICSLPHLFYPGMVLRCIVAKLDTAKSGSTSIQLSASPKLVNK ALNSSSLKAGMILSGCVESVEDHGCIIDIGISGSKAFLSAKAVKDQHNNLDELKVGQYLT CKVEEVKNEGRVVRLSASPSTFAQACAESEQGWNLTNLLPGLLVKATIKKVTKHGLIVDF LSSFTGQVDFLHMEPEQADKYTEGKEVRACVLYLEPSMRLVGLSLRSYLVQPEQRVEPVS AGGERIGEVVKDCKMTVVHHMSGALLELPDQTLAFVHRNHLKESNEPPNENRVLAKPEHT CRILDFSVIDQIHFASLRKSVIARPFFRYHDLQPGQVVEGKVSVLLERGMMVHISDHIKG LVPKNHLSDIILKNPEKKYSEGMKVKCRVLSVDVESRKLYLTRKKALVESSLPLFLTYAD ARPGRMSHGFIVCIKDFGCIVRFYNNVKGLVPISELGTEAIVNPEEIFYVGQVLKTKVLK CDLEKEKILLSFKAAVEGDTEAAVEPQVDCEVGKPLEVKVLKKSIVGVEVAILPDEIQAV LPTMHLSDHVSNCLLLWESLQEGDVISNVMCFNKNKRHISLTKKPTVRWSLEEGAVAKDF SEITVGMQLIGWVKNIMSYGVFVEFPYGLVGLAPKSAMTDKFISDTAVAFQLGQTVIAKV TNLDEEKRRFLVTLKISEVIAPEADAQTRLIYGLQERRAVGDMLAMRGNSELRQQLAALT VGQKLKMTVDTVDGNGATFKSDDLGDATILASKYHVMGVNLTAGQKVTAVVLYVDILSNT VHVSLLTKLLMKKKSLSEGSKYTVMVQHIDKEFAVISLDDTAQLTVIQTSSHLNEVFLSE SEKLKGGMILEAEVIEPSFQELQGLPLVSWKRTAPKRLRTTSENQMSSRGHCFGEILQGT VKTVKPTCIQVTLEDGTTGSVHVSEVMEVDKVSLGSFPTSSVKVGSSVTVRVIGGREASS QRFLPFSHPKFTYTIPELTLTPSKLDKSVDFKQVTVKDKVSSYKVGDEITCFVSKFNPER KSLEVTINPGVTGTVELLAMITDPKNGSHPEKLYKLGQAVRATVVEISSKHRPFVLSLTG GHKLEEGTVTLGIVTNVQPQVGLLVKLPFGGMGTVAVTELADAYRPNPLAGYSKDQLLRC FLLESENDKWQLSLRQSRLNPQQDKPVKDPEVLSFDKLKEGEIIRGYVKSVGEQGVFIRL SWHIIGRAQLQQSTNYFVNSHKVLSTHLPPNTLLTTKILSIDKEEEYVNLSLLPVDTGKP DVLPESLGLPLRLVGEEKKKHDTKKKKKRTLSESEQKQAESQVPKKKKKTKKSKTDDSDS GVEVYFREEEDKEEEEPKPEPPKQVKSSSAAPSRLQVAAGFSWDVGLNSLKPASAARDAD SSDGEEQESSSKPQKKSRHALEQEKKAAEKALVRQETELMDPSLRPEDAAAFERLLLASP NSSLLWLQYMAHHLQATQIEQARAVAERALKTISFREEQEKLNVWVALLNLENMYGTEES LKKVFERALQFCEPMPVYQQLADIYAKSSKIKEAEGLYKTMVKRFRQNKEVWLSYGSFLL QQGQSDTASSLLQRALKSLPTKESVDVIAKFAQLEFRYGDAEKGITMMDKVLTSYPKRTD LWSVFIDLTIKHGSQKDIRALFDRVIHLSVSVKKIKFFFKRYLEYEKKHGTPQSIQAVKE KAMEFVEAKGTEAAN NT seq 5448 nt NT seq  +upstreamnt  +downstreamnt atggcatcattggaggaggatttccctcgaggagggtcagcaaagaagcccacgaaaagt acaatagtggtgcagcgacccgaagtggacaatctgttccagtcaaatgaacaagcagaa acaaagaaaagaagggcaacgatcaaagacgatgtcaagaaagtcaagaagcagaaaacg ggcaaagaaaaagacggcctcactctcaacacagcagccaagtgtgtagaaatcctgcat gctaagaatgtgaaggagggtatgctgatgctgggctgtgtgaaagaggtcacagacttt gaggtgaccgtcagtctgccgtgtggtctgcaaggcttcctgagcatcaagaacgtcagc gactcttacaccaagctgctcagtgaacagctggattccactgacacagaggagatctgc tccctccctcacctattctaccctggcatggtgttaagatgtatagttgccaaattggac acggctaaaagcgggtctaccagcatccagctgtcggccagtccgaaattggtcaacaag gctctcaattcaagctctctgaaagctggcatgatcctgagtggatgtgtggagagtgtg gaggatcacggctgcatcattgacattggcatcagtgggtccaaagccttcctctctgcg aaagctgtaaaagaccaacacaacaacctggacgagttgaaagtgggtcagtatttgact tgtaaagtggaagaagtcaagaatgaaggacgagtggtccgactttctgccagtccctca accttcgcccaagcctgtgctgagtccgagcagggctggaacctcaccaacctgctgcct ggtcttctggtcaaagctaccatcaaaaaggtgacgaaacatggtctgatcgtggacttc ctgtcctccttcaccggtcaggtggactttctccatatggagccagagcaggcagacaag tacacagagggaaaggaggtgcgagcctgtgtgctgtacttggagccctccatgcgcctg gtgggtttgagtctgcgcagctacctcgttcagcctgagcaaagagttgagcctgtctct gctggcggtgaacgcattggtgaggtggtgaaagactgtaaaatgacggtcgttcaccac atgtccggagcgttgttggaactgccggaccaaacgttggcatttgtacacaggaaccac ctgaaggagtcaaacgaaccaccaaatgagaacagagtgttggcaaagcctgagcacacc tgcaggatcctggacttcagtgtcattgaccaaatccactttgcaagtctgcgcaagagt gtgattgcaaggcctttttttagatatcatgatcttcagcctggtcaggttgtagagggg aaagtgtcagtcctgctggagcgtgggatgatggtgcatatttctgaccacattaaaggc ctggtgcctaagaaccacctgtctgacattatcctcaaaaacccagagaaaaagtactcg gagggcatgaaggtcaaatgtcgggtgctgtcagtagatgtggagagtaggaagctgtat ctgaccaggaagaaggccctggtcgaaagctccctgccgctgttcctcacctatgccgac gctcgtccgggccgcatgtcccacggttttatcgtctgcatcaaagactttggctgcatc gttcgtttctacaacaacgtcaagggcctggtgccgatcagtgaactcggaactgaggcc atcgttaatcctgaggagatcttctatgttggacaggtgttaaagactaaagttctcaag tgtgatctggagaaggaaaagatactgttgtcattcaaagctgcagtggagggagacacc gaggcagctgtcgagccacaggtcgactgtgaggtgggaaaacctctggaggtcaaggtg ctgaaaaagtcaatcgttggagtggaggtcgctatcctccctgacgagatacaagcagtt ttacccaccatgcacctctctgatcatgtgtccaactgcctgctgctgtgggagagcctg caggagggagacgtcatctcgaacgtcatgtgtttcaacaagaacaagcggcacatctct ctcactaagaagccaacagtgaggtggtccctggaggagggagcggttgccaaggatttc tcagagatcacagttgggatgcagctgatcggctgggtcaagaacatcatgtcctatggc gtgtttgttgagttcccgtacggccttgttggtctagcacccaagtcggccatgaccgac aagttcatcagtgacacggcggttgccttccagctgggccagactgtcattgctaaggtg acgaacctcgatgaggaaaagcgccgcttcctggtcacgttgaagatttcagaggtcatc gctccagaggcggacgcccagaccagacttatctacggtctgcaggagagaagagctgtg ggtgacatgttggcaatgagaggtaacagtgagcttcgccagcagctggctgctctcact gttggtcagaagctgaagatgaccgtagacactgtggacggcaacggggcaacatttaaa tctgacgatttgggcgatgctaccatactggccagcaagtaccatgtcatgggcgttaac ttgacagcaggacagaaagtcaccgcagtcgtcctttacgttgacatcctgtccaacacc gtccatgtgtctctcctgacgaaactgttgatgaagaagaaatctttaagtgaaggatct aaatacaccgtgatggtgcagcacatagacaaagagtttgccgtcatctcactggatgac accgcacagctcactgtgatccaaaccagcagccacctgaacgaggtgttcctctccgag tcagagaagctgaaggggggcatgattttggaggctgaggtcatagaacccagctttcag gaactgcaagggctccctctggtgtcatggaaacgcactgcacccaaacgactgcgcacg acctccgaaaaccagatgagctcccgaggtcactgctttggcgaaatcctgcaggggaca gtgaagacggtaaagcccacctgcattcaggtgacactagaggacggaaccacgggcagt gtgcatgtgtcggaggtgatggaggtcgacaaagtgtctctgggttctttcccgacgtcc tcggtgaaagtgggcagtagcgtcactgtcagggtcattggaggacgagaagcctcaagt caaagattcttgccgttttctcatcccaaattcacatacaccattcctgagctcacactt acgccaagcaaactggataaaagtgtggatttcaaacaagttacagtgaaagacaaagtc agcagctataaggtcggggacgaaattacatgctttgtatcaaagtttaatccagagagg aagtctttggaggtcacgattaaccccggtgtcactggcacggttgaacttttagccatg atcactgacccaaaaaatggcagtcatccagagaaactatacaagctgggccaagcagtc cgtgccacggtggtcgaaattagctccaaacatcgtccctttgtgctgtcactcacaggt ggccataaactggaggaaggcaccgtgactttgggcatcgtgactaatgttcagccgcag gttggtctcctggtcaagcttccctttggaggcatgggcactgttgccgtcactgaactg gccgatgcctacaggccaaaccctctcgccgggtacagcaaggatcagcttctcaggtgt ttcctcctggagagcgaaaacgacaagtggcagttgtctttacgccaatcaagactgaac ccacagcaggacaagcccgtgaaagaccccgaggttttatcttttgacaaactgaaggag ggcgagatcatcagaggctacgtcaagtctgtgggagagcagggcgtcttcatcaggttg tcttggcatatcatcggcagagcgcagcttcaacagtccaccaattactttgttaacagt cataaagtcctttctacacacctgcctcccaacactctgctcaccacaaagatcctcagt attgacaaagaggaggagtacgtcaacctctcgcttctccccgtggacaccgggaagcca gacgttctcccagagtctctcggtctgccactgcgtctggtcggagaggagaagaagaaa cacgacactaagaagaagaagaaacgcacactgtctgagagcgaacagaaacaagccgag tcccaagttcccaagaaaaagaagaaaacaaagaaatccaagaccgacgatagcgacagt ggagttgaggtgtacttcagagaagaggaggataaggaagaggaagaacccaaacctgag cctccaaagcaggtgaagagcagctcagcagctccatccagactacaggtggcagcaggt ttctcgtgggatgtgggtctaaactcccttaaacctgcctctgcagctcgagatgcagac tccagtgatggagaggaacaggaatcaagcagtaagccccagaagaagtcccgtcatgcg ctggagcaggagaaaaaagcggcagagaaggcgctggtgcgacaggaaacggagctcatg gatccaagccttcggccggaagacgcagccgcctttgagcgcctgcttctcgcctccccc aacagctctctgctttggctccagtacatggctcaccatcttcaggccacgcagatcgaa caggcccgagctgtggctgagagggctctgaaaaccatctccttcagggaggagcaggag aagctgaatgtgtgggtggccctgctgaacctggagaacatgtacggcaccgaggagtct ctgaagaaagtgtttgagcgggcgctgcagttctgtgagccaatgcccgtctaccagcag ctggccgacatctatgccaagtccagcaagatcaaggaggcggagggcttgtacaagacg atggtgaagcggttccgtcagaataaagaggtgtggctgagctacggatccttcctgctc cagcagggtcagagcgacactgccagttctctcctgcagagggcactgaagagtctgccc accaaagaaagtgtggatgtaatcgctaagtttgctcagctcgagttccgttacggtgat gcggagaaaggtatcaccatgatggacaaagtcctgacaagttatcccaaacgcacggat ctctggtccgtcttcattgacctcacgatcaaacacggatcacagaaggacatcagggcg ctctttgatcgcgtgatccacctgagtgtttccgtgaaaaagatcaagttctttttcaag cgctacctggagtacgaaaagaagcacggcaccccgcagagcatccaggcggtcaaagag aaggccatggagtttgtggaggctaaaggcaccgaggccgcaaactaa

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