Solea senegalensis (Senegalese sole): 122771131
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Entry
122771131 CDS
T07721
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122771131 (zc3h12b)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122771131 (zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
122771131
NCBI-ProteinID:
XP_043884431
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Position
LG6:18799861..18812385
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AA seq
846 aa
AA seq
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MTAWSLLEKLKMEKHSCREENIDSSEAQHATDESEDGSSSESESEERQHQRLQVNSSSCK
KREAGAVTKPHRQLCRSPCLDRPSFSQSSTAVDFREDESSVGPGIKAVSDREYQAKMEFA
LKLGYSGEQVETVLNKLGAAALINDVLAELVRLGNKVEPEVQPCSSTATLISRSLCVKEI
VSPEVSVEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFREKGHKDITV
FVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSD
GIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPV
VPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALVKC
GTSPAAAKGDSSSEAKRVAPKRQSDPSIRSVACEPSEALSVIRKSETNSVPSLVSALSVP
TMQPPKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASVTYSDQF
PKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGMYQRNLSHCPESCLSHSNSD
SFSSYVDLYPSSVDSSLEESMKGQQQSPAQGRMHTFSHGFRHEALTRVQSYGPEEPKQGP
RKQSGSHLAPHIQHVAVGARSSCPGDYPLTQTALPPLSSQPTRSLGMTRMDSISDSRLYE
SNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIW
NSPWETLSAAEHQDRYVIPEHQYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQQLAAVIVT
KLRSCH
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatggtccttgttggagaagctcaaaatggaaaaacactcatgtagggaggag
aacattgactctagcgaggcgcagcatgccactgacgaatctgaggatggaagcagctcc
gaaagcgagtcggaagagcgacaacaccagaggcttcaggtgaacagcagcagctgtaaa
aagcgggaggctggggctgtcactaaaccacaccgtcagctttgtcgctctccgtgcttg
gaccggcccagtttttcccagagtagtaccgcggtagatttccgtgaggatgagagcagt
gtgggaccagggatcaaggctgtcagtgacagggaataccaggccaagatggagtttgct
ttgaagttgggctattctggagagcaggtggagactgtgctcaacaagctgggagctgct
gctttaattaatgatgttctcgcagagttggtaaggcttggaaataaagtggaacctgaa
gttcaaccttgcagcagtacagccacactgatatcacggtccctctgtgtgaaggagata
gttagtccagaagtgtcagtggaagaggaatctgtggatacctatgataacctcaggcct
attgtcattgatggctcaaatgtggcaatgagccatggaaacaaagaagtgttctcttgc
cgtggtatccaacttgctgttgagtggtttcgggagaaaggacacaaagacatcactgtg
tttgtcccagcctggagaaaagaacagtcaagacctgatgccctcatcacagatcaagaa
atattacgcaagctggaaaaagagaagattctggttttcaccccttctcggagagttcag
ggcagaagggtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattctgat
ggaattattgtgtcaaatgacaactacagagacctgcaaaacgagaagcccgagtggaag
aagtttatagaagagcgcctcctaatgtactcctttgtcaatgacaagtttatgccacct
gacgatcctctgggaagacatggtccaagcctggaaaatttcctccgcaaacgccctgtt
gttccagagcacaaaaaacaaccctgcccctatgggaaaaagtgcacatatggacacaag
tgcaagtactatcatcccgagcgtgtgaaccagccacagcgctcagtggccgatgaacta
cgagcctttgccaaattgtctgcagtgaagacgatgagcgagggggctttggtgaaatgc
ggcactagtccagcagctgcaaagggggacagcagctcggaggccaaacgcgtggcaccc
aaacgtcagtctgaccccagtattcgctcagtggcctgtgaaccttcagaggcactgtct
gtcattaggaagtctgagacaaattcagtgccttccctcgtctctgctctcagtgtgccc
accatgcagcctcctaagagccatgcagctggggccttgaacacacgatcagccagcagt
ccagtgccagggtctctacagtttgctcacagttctctggagcacatgtccagtgtgcag
taccctcccattttagttactaacagtcatggcgcctctgttacatacagtgaccagttc
ccaaaatacgactcggttagtgaccatggatattactcactgcacagtgatttttcgaac
atgagcatgagcagcatgcataatgttgatagtttctgtagcatggagcatgagcatggt
atgtatcagagaaatctcagccactgccctgaatcctgtctgagccattcaaacagcgac
tccttctcctcttacgtggacctgtacccaagctctgtggacagcagcctggaggagagc
atgaagggacagcagcagtctcctgctcagggcagaatgcacactttctcccatgggttt
cgccatgaagcgctgaccagggtacagagttatggaccagaggaacccaagcagggcccc
cgtaagcagtctgggtctcatctagcaccacatatccaacacgttgctgtgggagccaga
tctagctgtcctggagactatcccctaactcagactgccctgccacctctgtcctcacag
cccacacgctcacttggtatgacccgtatggacagtatatcagactcacgactatatgag
agcaacccaatgagacaaagacgacctccactgtgtcgtgagcagcatgcaagctgggac
cctctgccttgtggtaatgagtcctatggctatcattcatatccactgagtaacagcctg
atgccatgttgtgagcgagtgatggtccgcagcatgcctgacaaaatggaacaaatctgg
aactcgccatgggagaccctgtctgcagctgaacaccaagaccggtatgttatcccagag
caccagtatcaaacatatcggaacctctgtaacatctttcccgcttacatagtgcactcg
gtcatggagaagaatcctcatttgacagacccacagcaactcgctgccgttattgttaca
aaactaaggtcgtgccactga
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