Solea senegalensis (Senegalese sole): 122771160
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Entry
122771160 CDS
T07721
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122771160
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122771160
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122771160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122771160
NCBI-ProteinID:
XP_043884478
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All DBs
Position
LG6:5121402..5130614
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AA seq
648 aa
AA seq
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MRGGSSYGDRDRDRGRDRPRFSSMSGRGGPPPMKFGNPGERLRKKRWNLDELPKFEKNFY
VEHPDLQRLSQYEMEEFRRKKEITIRGSGCPKPVTAFHHAQFPQYVMDSLMQQNFKEPTA
IQCQGFPVALSGRDMVGIAQTGSGKTLAYLLPATVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL
NRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQ
INIGALELSANHNILQIVDVCMETEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
SSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDSGR
GGGGGGGRMRYRGSTANNPNLMYQDECDRRLRSGGGGGGGGGKDNRSGFNRTNRDGDRSS
SSTSYRDRSRDRRNGFSSGSDQYQSYSSSGYNPRSSAQSGGSGGQDQSSQPQGQFGQPPP
PSPAGGPKPLMAQQFALAQPSLMGFMGQAPFPFSSPPPPTSGAPPPRK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggatcgtcctatggagacagagaccgagaccgtggacgagacaggccacga
ttttcgtccatgagtggtcgtggtggacccccaccaatgaagtttgggaatccaggagag
cgtctccgtaagaagaggtggaacttggacgagctgcctaaatttgagaagaacttttat
gtggaacaccctgatcttcaacgcctcagtcagtatgaaatggaagagtttcgcaggaag
aaggaaatcaccatcagaggctctggctgtccaaaacctgtcactgcttttcaccatgcg
cagtttcctcaatatgtgatggattcgctgatgcagcagaattttaaggaacccacagcg
attcagtgtcagggcttccctgtggcgctgagcggcagggacatggtgggaattgcacag
actggctctggaaagacactggcttatctccttcctgccactgttcacatcaaccatcag
ccctatctagagaggggagatggtccaatttgtctggtcctggccccaaccagagagctg
gcccagcaggttcagcaggttgcttatgagtatggcaagtcttcacgtatcaaaagcacc
tgtgtctatggtggagcacccaaaggaccacaaattcgagatcttgagaggggtgttgag
atctgtatcgccacacctggtcgtctcattgacttcctcgagtcagggaagaccaacctg
aaccgctgcacctatctggtgctggacgaggctgaccgcatgctagatatgggctttgag
ccacaaattcgcaagatagttgaacaaatcaggcctgacagacagacgctgatgtggagt
gcaacttggccgaaggaggttcggcagcttgctgaggacttcctgagggattatgtgcag
attaatatcggtgctctggaactcagtgcaaaccacaacatcctgcagatagtggacgtc
tgcatggagacggaaaaggacaacaaacttcttcagctgatggaggaaattatggccgag
aaggaaaacaaaaccatcatctttgtggagaccaagaagcgttgtgatgatcttaccagg
agaatgaggcgggatggatggccagctatgtgtattcatggagacaagagccagccagag
agagactgggtacttacagaatttcggagtggtaaagcacccatactcatcgctactgat
gtcgcctcccgtggtctggacgtggaagatgtcaagtttgtcatcaactatgattaccca
agttcctccgaggattacgtccaccgcatcgggcgcacggcccgcagtaccaacaaaggc
actgcctacacctttttcacccctgggaacctgcggcaggccagagacctggtacgggtc
ttggaggaggcccggcaggccatcaacccaaaactgcttcagcttgtggactcaggccgt
ggtggaggaggaggcggtggaagaatgcgttaccgtggcagcaccgccaacaaccctaac
ctaatgtaccaggatgagtgtgaccgccgcctgcgctcaggtggaggcggtggcggtggc
ggtggcaaagacaaccgcagcggcttcaaccgcaccaaccgcgatggagaccgctccagc
tcctcgacctcctacagagaccggagcagggatcgcagaaacggcttcagctcgggctcg
gatcagtaccagagttacagcagcagcggctataacccccgcagcagtgcccagtccgga
ggcagcggaggtcaggatcagtcaagccagccgcaaggtcagtttggccagcctcccccc
ccttcacctgcagggggtccgaagccgctcatggcgcagcagtttgctctggctcagccg
tcactaatgggcttcatggggcaagcgccgttccctttttcctctcctcccccgcctact
tcaggtgctccacctcctcgaaagtag
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