Solea senegalensis (Senegalese sole): 122771233
Help
Entry
122771233 CDS
T07721
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122771233 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122771233 (taf5l)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122771233 (taf5l)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122771233 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
122771233 (taf5l)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122771233 (taf5l)
STAGA complex
122771233 (taf5l)
TFTC complex
122771233 (taf5l)
SAGA complex
122771233 (taf5l)
SLIK complex
122771233 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
PROPPIN
PEP5_VPS11_N
WD_LRWD1
Beta-prop_IP5PC_F
Nbas_N
AAA_3
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
122771233
NCBI-ProteinID:
XP_043884599
LinkDB
All DBs
Position
LG6:135335..139847
Genome browser
AA seq
600 aa
AA seq
DB search
MKRGRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCVNIVSAA
PCHSDPQQYETQFSRLRSFLSDTEIPWAKEVSSVLYPLFVYLHLDMVRCGLKGAVDGFYS
RFHGAFLQDGEQRATVEQLRHVLTAQDVVANPKLSAFLEHKYVIHLTEPAYGYLLRYLQS
EDNSALCRALSTHLQLEVTASRRTDYQLYGAVGVATATPNSASSWAGVDGAEGGEGVEVP
AGIPQSETALEALQDCIKKVREGPPSLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDC
STVKLWSLLARKLKAKAHRADVSRIHLACDVLEEEVDEEDVCGSEIKTLRGHSGPVFRTC
FLTDSSGLLSCSEDTTVRYWDLGSFTNTALYRGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYALRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLTFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDVRNSHCGTPADGSSSELVGLYTGNASNVLKVQFMACNLLLVTGTAHEKTEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggtcgcactgagcagatccagtacgccgtggctcagtacctgaagaggagg
cagtatgtggacactgatggctccctgaagggagccaaactcttccagtcagcggaggaa
atggctgccagcctcacagtgcagacggagtcgggttgtgtcaacatcgtctctgctgct
ccctgtcactcagatccacagcagtatgagactcagttctccagactgcgctccttcctg
tcagacacggagattccctgggcgaaggaggtgagcagcgtcctctacccgctcttcgtc
tacctccacctggacatggtgcgctgcggcctgaagggggcagtagacggtttctacagt
cgtttccacggcgccttccttcaggacggcgaacagcgggccaccgtggagcagctccgc
cacgtcctcactgctcaggatgtcgtggccaatcccaagctgagcgctttcctggagcac
aagtatgtgattcacctgacggagccggcctacggctacctgctgcgttacctgcagagc
gaggacaacagcgccctctgcagggccctcagcacacacctgcagctggaggtcaccgcc
tccaggcgaacggactaccagctgtacggagccgtgggcgtggccactgccacaccaaac
tccgcctcctcctgggcgggtgttgacggtgcagagggcggggagggagtggaggtccct
gccgggatcccacagagtgagacggccctggaggcactgcaggactgcatcaagaaggtc
cgcgaaggcccgccctcgctcaccaccgtgtgtttctacgccttccaccacacagagcag
atgctgaacacggccgaggtgtcggccgacagccggctactcgccgcgggcttcgactgc
tccacggtgaagctgtggagtctcctcgccagaaaactcaaggccaaagctcatcgggcc
gacgtgtcacgcatccacctggcctgcgacgtcctggaggaggaggtggacgaggaggac
gtctgcggcagcgagataaagacactgcgaggtcacagtggccccgtcttccgcacctgc
ttcctgacggacagctccggcctcctgtcctgctctgaggacaccactgtccgctactgg
gacctgggcagcttcaccaacactgcgctctaccggggccacgcctacccagtgtgggac
gtggacgtcagcccctgcagcctctacttcgccagcggctcccacgaccgcaccgcccgc
ctctggaccttctcccgcacgtacgcgctgcgcctctatgccggccaccttgccgacgtc
gactgtgtcaaattccacccaaactccaactacctggccaccggatccacagacaaaact
gtgcggctgtggagcacccagcagggggcgtctgtgcgcctcttcactggccaccgcggc
cccgtgctctctctgactttctcacctaacggtaagtacttggcgtcggcgggcgaggac
cagcgggtgaagctgtgggacttggcgtccgggacgctgttcaaggacttgcgtggacac
acggacagcgtcaccagcctgtctttcagcccggacagcagcctggtggcatcgtcctcc
atggacaactcggtgcgggtgtgggacgtccgtaactcccactgtgggacgccggccgac
ggctcgtccagtgaattggtgggattgtacacgggcaacgccagcaatgtcctcaaagtc
cagttcatggcctgtaacctgctgctggtgacggggacagcacatgagaagacagagcag
tag
DBGET
integrated database retrieval system
