Solea senegalensis (Senegalese sole): 122771278
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Entry
122771278 CDS
T07721
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssen02000
]
122771278 (tmc5)
03037 Cilium and associated proteins [BR:
ssen03037
]
122771278 (tmc5)
Transporters [BR:
ssen02000
]
Other transporters
Pores ion channels [TC:
1
]
122771278 (tmc5)
Cilium and associated proteins [BR:
ssen03037
]
Other cilia and associated proteins
Stereociliary proteins
122771278 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
122771278
NCBI-ProteinID:
XP_043884685
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All DBs
Position
LG6:6167721..6178380
Genome browser
AA seq
957 aa
AA seq
DB search
MTSYSNGGFFNPAYHDNETLEIDKRYPRKNNHTNPYAREAPSWQGSGAETHNGSVGRTTG
GDDSLARMPWGGWEEESQRGRESIPMGLISTRHHDRNHSAFQINPDSQYDRSRIGQLPSS
ISANMTMRWRGMTMRSMSMFPDADPARLAFTEDAIRNEMENEEQNQVKELVALSTRDRIH
AIRSLPTSFAEKKHIRSQVLKSAKKSRKNAHLADFSENVSLFFRRCGYSVRSARQTLQLW
HGIMKEIGGKFGTSVLSYFVFLKWLLMFNIFSFLVNFGFITIPLLVYDPTPNIPPNVSFR
GLELLTGAGYFRYTVMYYGGYSNKILVGLVDYNMQLAYFFTITLYMVLCGVALLYSMASS
FQTNYVLAAPASSGAWQLLCSWDFSVTNERAVRQRKNNLRVQLQESLSEKAQRERLTLSV
KLKQFGVYLGSWLLSTGLAVGCGASIFYLCQYEEQRTTDAPSWTLLQEAETLLLPFVVSL
MNLVIPLFYSLFNKFELYSSQRKQVYALVVRNVLLRGSILGVLCYYWMNVVPEKFSCWES
VVGQSLYRLVIFDFLFLMLGSFFGEFLSKVLGTTLLPRLGVPEFDIARNVLELIYAQTLA
WIGIYFSPLLPAIQILKFFILFYLKKVSLTHNCQPPRRTGRAAQMQTTFIALLFFPFFVG
AVSMVAFTAWRLTPSKHCGPFRGLSNTFIVVEVWIAELAAKPGSVWVVWIYQHVIESELF
YFMLVLIVLVVIYMFWQVIQGRKQLIVLLKQQIVNEGKDKAFLLEKLQNLQKSRPNKILK
QKTPKKHTKQRSGNVSAGGQSTSNAMLQALFARQQLEDEEGRRGNGGVPVPSDISTSSAL
VQAMMARQRAEDQEEDTHMSDTDFSSPSAFTQASQARQRAEVEAWDEHNGAADYHENAAN
TSSAVMLVMQARQRAEDEDRTQWVPAHPQNPVPAGSSALIQAMLARQQAQNEFDDGY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagcaacggtggatttttcaaccctgcttaccatgacaacgaaactctg
gaaattgataaaaggtatcctcgcaaaaacaaccacaccaacccttatgccagggaagcc
ccctcctggcagggtagcggagcagagacacataacggctccgtgggtcggacgaccggt
ggggatgattctttagcgagaatgccctggggaggctgggaggaggagagccaaaggggg
agagaaagcatccccatgggcctcatctcaacccggcatcatgatcgcaatcacagtgca
tttcaaatcaaccctgactctcagtacgatcgatcgcgaataggtcaacttccgtcttca
atttcagctaacatgacaatgagatggagggggatgacgatgagaagcatgagcatgttt
cccgatgctgatcctgcccgtctcgcgttcaccgaggatgccatcaggaatgagatggaa
aatgaggaacaaaaccaagtcaaggagcttgttgccctgtcgacacgagaccgaatccac
gcgatccggtctcttccaacgagctttgcagaaaagaaacacatcaggagccaagtcctc
aagtctgccaagaaatctcggaagaatgcacacttagcagatttctctgaaaatgtctcg
ctgttcttccgcaggtgtggctacagtgtgaggtcagccaggcagacgctgcaactgtgg
cacggcatcatgaaagagatcggtggcaagtttggcaccagtgtcctctcgtatttcgtg
ttcctcaagtggctgctcatgttcaacatcttctccttcctcgttaactttggctttatc
accatcccgctgctcgtttatgaccccacacccaacatccctcctaatgtgagcttcagg
ggactggagctactgactggagctggttacttcagatatactgtcatgtactatggcggc
tacagcaataaaatcctcgtgggtctggtggactataacatgcagctggcctatttcttc
accatcacactctacatggtgctgtgtggagtggcacttctttacagcatggcaagctca
tttcagactaattatgtactagcagctcccgcctcaagtggtgcatggcaactcctgtgc
agctgggattttagtgtaaccaacgagagagcggtgaggcagcgcaagaacaacctccgt
gtccaactccaggagtctctgtcagagaaggcccagagggagcggctcaccctctctgta
aaactcaagcagtttggagtgtatctgggttcctggctcctctccactggcttagctgtc
ggctgtggggccagcatcttctacctctgccagtatgaagagcagcggacaactgatgct
cccagctggactctgcttcaggaggccgagactctcctgcttcccttcgtggtgtctctg
atgaacctggtcatcccgctcttttactccctcttcaacaagtttgagctctactccagc
cagcggaaacaagtctacgctctagtggtcagaaatgtcttgctcagaggttccattctg
ggcgtcttgtgttactactggatgaatgtggtgcctgagaagttttcgtgttgggagtca
gtcgtggggcagtctttgtaccgtctggtcatttttgacttcctttttctgatgttggga
tccttctttggagagtttctcagcaaagtacttgggacgacgttattaccacgtcttggg
gttccagagttcgacatagccagaaacgtccttgaacttatctacgcacagactctagcc
tggatcgggatctacttctctcccctgctgcctgccatccagattctcaaattcttcatc
ttgttttaccttaagaaggtcagtctgactcacaactgccagcctccgcggcgaacagga
agggcagctcagatgcaaacaactttcatcgccctcctcttcttccctttctttgtggga
gccgtgtccatggtcgcgttcaccgcctggagactcacgccctcaaagcattgtggtcct
ttccggggtctcagcaacaccttcattgtggttgaggtgtggatcgctgagctggcggcg
aaacctggttctgtgtgggtcgtgtggatttaccaacacgtcattgagagtgaattattc
tattttatgctcgtactcatcgtcctcgtcgtcatatacatgttctggcaagtgattcaa
ggccgcaagcagctcatcgttctactgaagcagcagattgtcaatgaggggaaagacaag
gccttcttgttagaaaagctccagaacctccagaaatctcggccaaataaaatactcaaa
cagaagactccaaaaaagcacaccaaacaacgttcaggtaacgtgtccgcaggtggtcag
tccacctcaaatgccatgctgcaggctctgtttgctcgccagcaactcgaagacgaggag
ggaagacgaggcaatggcggcgtgccagttccctccgatatctccacgtccagtgcccta
gtgcaggccatgatggcccgtcagagagctgaggaccaggaggaagacacgcacatgtcg
gatacagacttttcatcccccagtgccttcacacaggcctcacaagcgagacagagggcg
gaggttgaggcgtgggatgaacacaacggtgcggccgattatcacgaaaacgctgccaac
acgtccagcgccgtcatgctggtgatgcaggccagacagagagctgaggacgaggacagg
actcagtgggtccccgctcacccacaaaacccagtccccgcgggctccagcgcactcatt
caggccatgttggcgcggcagcaggcccagaacgagtttgacgatggctactga
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