Solea senegalensis (Senegalese sole): 122771340
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Entry
122771340 CDS
T07721
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122771340 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122771340 (zcchc7)
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122771340 (zcchc7)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122771340 (zcchc7)
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122771340 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
122771340
NCBI-ProteinID:
XP_043884796
LinkDB
All DBs
Position
LG6:13751617..13798113
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AA seq
631 aa
AA seq
DB search
MYCMYQDREELEDDLYQEEEGDSEASEVNSELEFFLYSQLHYSSNALEVEEEEEEKEGRG
ENTADQGSEKAPDAGKELELPSPDIGKVQQHLKKRKDEEKRDKKRKSDPKRQSSSGSSRF
EEVIVIDSSSDVISISEDDTADDEGICSLKCRSVHQLQTSTPAQQRDLKKKSSLSVPVTV
DISSSDSDSDESESKSESDSSDSLDSTESSDSEGLENWMILGQGRQNEDQSISLNLEGGS
DSNTDAEEDDGSWLVSDKDKEAQICNKDKGARTVLQRVSNRYYTSKNVNCRNCNKTGHLS
KNCPEPKKLSPCFLCGTPGHQTRDCPNRHCNNCGLPGHLYSSCSERAYWHKQCHRCGMKG
HFFDVCPEIWRQYHITSKTGPPVMQQGEDNGRSPAFCYNCSRKGHFGHACTRQRMFNGVY
ATIPFISHYDTVEDINRRQHRLKMKVKEMKRNGCFSNTCENPVNPEPPKKKQKLNHHKNN
HTHHQISQNHKPSRSHIYFNNDDDGDLLTIPKKNKFSKCKQQQSTSNVKAWKPKRPVPTS
RDPSTKLFLDEADDFPRGGGKGRGIVGKKSNKNKMKKKEEPKGGQRDRRPDHLFGEKRKK
NQARRVSNKKSAASMYPTDENLFIIKQRKRR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtatgtatcaagaccgtgaagagttggaggatgatctctaccaagaggaagag
ggagactctgaggcatcagaggtcaacagtgagttggagttcttcctctacagccagctc
cactactcttctaatgctttggaagtggaagaagaggaggaggaaaaggagggcagaggt
gagaacacagcagaccagggcagcgagaaggctccagatgccggcaaagaactggaactt
ccatcacctgatatcggcaaggtacagcagcacctgaagaagaggaaggacgaggagaaa
cgtgataagaagaggaaaagtgatcctaaaagacagtcttcgtcaggatcctctcgtttt
gaggaagtcatcgtaattgactccagctctgacgttatctccatctcagaggatgacact
gctgatgatgagggcatctgtagcttgaagtgtcgcagcgtacaccagctgcagacatcc
accccggcacaacagagggacctgaaaaagaagagcagtctcagtgtgccggtgactgtg
gacatcagcagctcagactcggattcagatgagtcagaatccaaatctgagtctgattct
tcagattcattggattcaacagaatcctctgattcagaaggtttggagaactggatgatt
ctgggccaagggagacagaatgaagaccagtctatctcactcaacctggaaggaggatct
gacagcaatacagatgctgaagaagatgatggcagctggttggtctctgacaaggacaaa
gaggctcagatctgtaacaaagacaaaggtgccaggacagtgctgcagcgggtttccaac
agatactatacaagcaagaacgtcaattgtagaaactgcaacaagaccggccatctctca
aagaactgcccagaacccaagaagttgtcgccctgcttcctgtgtggcaccccgggacac
cagaccagggactgtcccaacaggcactgcaacaactgtggcctgcctggtcacctatac
agctcctgcagtgagagggcatactggcacaaacagtgtcatcgctgtggcatgaagggg
cacttctttgatgtatgtccagagatctggagacagtaccacatcacaagcaaaacaggc
cctcctgtgatgcagcagggagaggacaatggacgatcgcctgccttttgctacaactgc
tccagaaaaggacactttggccatgcatgtacacggcagaggatgttcaatggtgtgtat
gccaccatccctttcatcagccactacgacacagtagaggacatcaaccgcagacaacac
aggttaaagatgaaggttaaggaaatgaagagaaatggctgcttctctaacacctgtgag
aaccccgtcaacccagaaccaccaaagaagaaacagaagctcaaccatcataaaaacaac
cacacacaccaccaaatctctcagaaccacaaacccagtcgcagccatatctattttaat
aatgatgatgatggtgacttactgacaataccaaaaaaaaataagttcagcaagtgcaaa
caacaacaaagtactagcaatgtgaaagcatggaaacccaagagaccagtgcccacctca
agagacccatcaactaaattatttttggatgaagcggatgactttcccagagggggaggc
aaaggacggggcatagtgggcaaaaagagcaacaagaataagatgaaaaaaaaggaagaa
ccaaaaggtggacaaagagacagaagaccagaccatctctttggagagaaaaggaagaag
aatcaagcccggagagtttctaacaaaaaatctgctgcatcaatgtatccaacagatgaa
aacctatttatcatcaaacagaggaaacgcagataa
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