Solea senegalensis (Senegalese sole): 122771374
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Entry
122771374 CDS
T07721
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122771374
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122771374
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122771374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
122771374
NCBI-ProteinID:
XP_043884849
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All DBs
Position
LG6:complement(11997526..12003794)
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AA seq
439 aa
AA seq
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MRPNQIFLLSVEMAENDVDNELLDYEEDDEPQGAPESGTPANKKDVKGSYVSIHSSGFRD
FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEP
VDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVSVFFGGLAIKNDEDVLKKNCPHIV
VGTPGRTLALIRNKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSA
TLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLRDSEKNRKLFDLLDVLEFNQ
VVIFVKSVHRCVALSQLLVEQNFPAIAIHRGMSQEARLSRYQQFKDFQRRILVATNLFGR
GMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQDRFEV
NVAELPEEIDISSYIEQSR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagacccaaccagattttcctgttgtcagtagagatggctgagaatgatgttgacaat
gagcttctggactacgaggaggatgatgagccccagggagcaccagagagtgggacccca
gcaaataagaaggatgtgaaagggtcctatgtatctatccacagctctggcttcagagat
tttctcctcaaaccagagctgcttcgagccattgtcgactgtggttttgagcatccctct
gaagttcaacatgagtgtattcctcaagccattttgggaatggacatcctgtgtcaagcc
aagtctggtatggggaagacggcagtgtttgttctggccacactgcagcagatagaacct
gtggatggtcaggtgtctgtccttgtgatgtgccatacacgagagttggccttccagatc
agcaaggagtacgaacgcttctcaaagtacatgcccactgtcaaggtgtccgtgttcttc
ggtggcctggctattaaaaatgatgaggatgtcctgaagaagaactgtcctcacatcgtc
gtgggaacaccagggcgtaccctagccctcatccgcaacaagaccctcagtgtgaagaac
ataaaacactttgtgcttgatgagtgtgataagatgctggagcagctggatatgaggcgc
gacgtccaggaaattttcaggctgacacctcacgagaagcaagttatgatgttcagtgca
actctcagcaaggagattcgccccgtctgccgcaaattcatgcaggatccaatggaagtt
tttgtagatgatgagaccaagctgacacttcacggcttacagcagtattattgcaagctg
agagacagcgagaagaaccgaaagctgtttgacctacttgatgtgctcgagttcaaccag
gtggtgatctttgtaaagtctgtgcatcgctgtgtggctctgtcacagctgctggtggag
cagaatttccctgctattgccatccacaggggaatgtcacaggaggcaaggttatcccgg
tatcagcagtttaaagacttccagcgaaggatcttggttgcaactaacctgtttggccga
ggcatggacatcgagcgagtcaacatcgtctttaactatgacatgccagaggactctgac
acttacctacacagggtggctcgtgctggcaggtttgggaccaaaggtctggccatcacc
tttgtgtcagatgagactgatgctaagacactgaatgaggtccaagaccgttttgaggtc
aatgttgcagagctcccggaggagattgatatttcttcttacattgaacagtcgagatga
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