Solea senegalensis (Senegalese sole): 122771398
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Entry
122771398 CDS
T07721
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122771398 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122771398 (psip1a)
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122771398 (psip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
122771398
NCBI-ProteinID:
XP_043884885
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All DBs
Position
LG6:complement(25222558..25232734)
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AA seq
513 aa
AA seq
DB search
MARDWKPGDLIFAKMKGYPHWPARIDEVPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFP
YQPNKDKYAKPNKRKGFNEGLWEIENNPKVELTAPKPVPPQTFTEKDSDSSPDGEEEADD
KAIKSKVPGSEAEQENENEEEEEEKEQEEEEEKGSLISEQGPQNQDGAAPNESTDVLKQK
RGRKKKSDADQEAETEDAPVSPVSPSGGEGPKRRGRKPKSEKLLLLQQQQQQDQQGSGSE
MDTTELDRKRKRGPEDKSKGGEEDKRKKREDSKGKDAEVKEPEAKKKKQSKDDGSSGSDD
EEKNKSRKKQQSSEVDKDARRRKADELREGSKDDGKKNEDKAGVKKKEVSTDFKLQRLHS
EIKISLKIDNPDVKKCLEALDEISALQVTTQNLQKHSELIATLKKIRRFKASQDIMDKAT
MLYNKFKSMFLVGEGDCVLSQVLNKSLAEQRQHEEAKKGALKRVEQAKENTSDKISNGDM
SPEEKKHETEKLLEDASAAKHHSSTPKAQEEST
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagactggaaacctggtgatctgatttttgccaaaatgaagggctaccctcac
tggcctgcaagaatcgatgaagtccccgatggtgccgtgaagccgtccaacatcaagttt
cccatcttcttctttggcacccacgaaacagcctttctcggcccaaaagatatctttcca
taccagcccaacaaagacaagtacgccaagcccaacaagaggaaagggttcaatgaagga
ttgtgggaaattgagaacaacccaaaggttgagctcactgcgcccaagccagttcctcca
cagaccttcactgaaaaggactcagacagcagtccagacggagaggaggaggcagacgac
aaggcgatcaaatccaaagttccaggaagtgaggctgagcaggagaatgagaatgaggag
gaggaggaggagaaggagcaggaggaggaggaggagaaagggtctctgatctctgagcag
ggtcctcagaaccaggatggtgcagctcccaacgaatccacggatgttctgaaacaaaag
agaggacgcaagaaaaagagtgacgctgaccaggaggcggagacagaagatgctcctgtg
agtcctgtgagtccgtcaggtggagagggtcccaaacgaagaggcaggaagcccaaaagt
gagaagctgcttctgctgcagcagcagcagcagcaggaccagcaaggctcaggaagtgaa
atggacactactgagttggacagaaagagaaagaggggaccagaggacaagtctaagggc
ggagaggaggacaagagaaagaagagggaggacagcaaaggaaaggacgcagaagtgaag
gagcctgaagccaagaagaagaagcagtccaaggatgatggctcctccggctccgacgat
gaggagaaaaacaaaagcagaaagaaacagcaaagctcagaagtggacaaagatgctcgg
cggaggaaagccgatgagttaagagagggcagcaaagacgacgggaagaagaacgaagac
aaggcgggagttaagaaaaaagaagtgtctactgactttaagctccagcgactgcacagt
gaaatcaagatttcactgaaaattgacaaccctgatgtgaagaagtgcttggaggcgtta
gatgagatcagtgctctccaggtcacgactcagaacctgcagaaacacagtgaactgatc
gccacgctcaaaaagatccgcaggttcaaggccagtcaggacatcatggataaggccact
atgctgtataacaagtttaagagtatgtttttggtcggagaaggcgactgcgtgctcagc
caggtgctcaacaagtctttagcagagcaacgtcagcacgaagaagcaaagaagggagca
ctgaagagagtcgagcaagccaaggagaacacctcggacaagatttcaaacggggacatg
agtcctgaggagaagaagcatgagacagagaagctgctagaagacgcctcggctgctaaa
catcacagcagcacccctaaagctcaggaagagtccacttga
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