Solea senegalensis (Senegalese sole): 122771402
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Entry
122771402 CDS
T07721
Symbol
si:dkey-92j12.5
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122771402 (si:dkey-92j12.5)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
L27_1
Motif
Other DBs
NCBI-GeneID:
122771402
NCBI-ProteinID:
XP_043884893
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Position
LG6:13048655..13084637
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AA seq
1948 aa
AA seq
DB search
MDTQCALDAVERLQAKLKERGEAPTQEKLSLLKTVLQSPLFHHILSLQQAQRKPLAKGKV
ISKSLSMNCGQCPGISVGLKMLSHSDSYTWAMENRTPSTARSFYRDSSVCSLASQDLSFS
DVNLNNYTHTESQYCTPPRISRTMSMGRNLSAIAHERRHVEMIELINDGKGLGFGIVGGR
STGVMVKTILPGGAAGRDKRLCSGDQILRIGDTDLAGMNSEQVAQVLRNAGTKVKLLIAR
DITKDNQLSSPTLSHDSLDGKLSDWNEDYEFSVQFTKNTCGLGLTISSYIGDLNSVYSAG
VVVKSIVKGSTVDQDGRIHVGDIILSVDGVSLQGCSEQRAMEVLRRTGPLVRLRLLRKAV
HLSHILPPVPPLQPLRHSHSFHEGNPYRVGLNKIKETGICSLREISWQAAYTNRRPQYHF
RNNVKLTADEEDDLRKRWQHAVGPRYEVIVCQLERFSESSGLGVSLEARAGHHYLCSVLP
EGPIGQSNKIFTGDQILEVNGIPLIGQTHKEVIRILKELPMDVCLVCSRIVAPSVPDNDD
EDDDDVHLTLKELLAEFNDKLDQGCVIPCPTAEDMTKRGVTPVSPPLAMWEREAQVVELE
KGESGLGFSILDYQDPEDATKTVLVIRSLVPGGVADRDGRLLPGDRLMFVNETDLEGSSL
DYAVHVLKSTAYGPVCIGVAKPLPLELCGSLTPISERSTQVSYDESLMQDILLAEGAEDI
TNSFNSEDSSVTKQCYSKTENQLRNRFGVMEDSESHRAPPLPPRTSFERTITVVRGNRSL
GMSVSAIKDGSGMLVRSVLQGGSVSQDGRLGVGDAILAINGEPTSHLTNAKARAMLRRHS
VIGPEMRSVHATLDSQCDSNNVTYVPARQVDEHRSRLCLPSLASIAVDSMSPSPTPPTPE
PEPVPGPGRSFSPHKAPASHSHSLKLSTSVKVEAAAPDSATVRVSPSFNTTSKGRAIVPT
ISPVRDSSMQIPRFLPLKNVGEQKEDTGNTPEEEISADVKVPKLEVEIKVDGKDEGDEEV
HPRTSVSWDQPRSVRLTREPGQSLGISIMGGRGMGRRLSSGEMMRGVFIKHITPDSPAAH
NGTLRTGERILEVCGVDLRDASHEQAVEAIRRAGDTVDFVVQSGQHRSQSPMLTNHERLT
PTPQSNSHSSKEAQPVTGLILSLSPTNPFTPTPFKVTSPVPDRKNRRSPISVTTASAAAA
AAAKDEDDTCRKKMLQRYGSLSGKLHMIELEKDPAVPGLGISLAGNKDGSRARMSVFVSD
IDPRGPAGLDGRIRVGDELLEINGQILYGRSHQNASTIINNAPSKVKIILVRNKGTLSQM
AQRSRTECGDTVDSHIDPAHHEGLSKDIYHVNLPQDHVGLGLCLAQGNSGDDIVVRSLIQ
QGTAVKDGRIKTGDTIIAVGDEPVAGMSVEKVSSLILKHRVTVKLSIKRSESLSSSILPL
SSSLSNPCSLSPTPSLPLPASFSSSSSSSSLSAMLNSPTGHSDWLGSTPTPEPLSCPVVA
GRETTIEISKGNIGLGLSIVGGCDTLLGAVVIHEVNDGGAAQRDGRLQAGDQILEVNGID
LQQATHDEAIGVLRLTTQRVRLRVFRYQEAYREEDLWDVFSMELRPRPGEGLGFTTVGKS
NDTGIFVSDIIRGGAADLDGRLLLGDQILSINDVDVRAAAQEHAQKLLQSYSGMVQLEVA
RFKAGLQYSQRSQEYFKLCFIQSEDSDCSTLTPSSGCDAPFVHQRETTDNKTGRYTVQNF
PDSRKVVLHKGPSDSLGITVAGGVGSPHGNVPLFIATTDTNGLTVKTQQLQTGDKLLSIN
DVSTEGMTHVQAQALLNNATGSISLQVAAGSGECSTRDNSDAQSLSQAGSLPRFHNNLCA
RTYKTITLEKDSSGLGFSIVGGFGSPHGDLPIYVKTVFNKGAAVADGRLKRGDQIIAVNG
HCLEGVTHAEAVDILKKTKGSVVLTVLS
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggatacccagtgtgctctggacgctgtggagcgactacaagctaaactgaaggagcga
ggagaggcaccgacacaggagaagctctcccttctcaagactgtcctgcagagccctctg
ttccatcacatactcagcttacagcaagctcagcggaagccccttgccaaggggaaagtt
atttctaaatctttgtccatgaactgtggacaatgcccgggcatatcagtgggcttgaag
atgctgagccacagcgactcctacacatgggccatggagaatcgaacgcccagcacggcc
agatctttctacagggacagcagtgtctgctccctggcctctcaggatctgtccttctca
gacgttaatctgaacaactacactcacactgagtcacagtactgcactccacctcgaatc
tcccgcaccatgtcgatggggagaaacctctctgccattgctcatgagagacggcacgtg
gaaatgattgagctgatcaatgacgggaaggggcttggctttggcatcgtgggagggcgg
agtacaggcgtgatggtcaagaccatccttcctggaggggctgctggccgagataaacgc
ctgtgtagtggagatcagatcctgcgcatcggagatacagatctggcaggcatgaacagt
gagcaggtggcacaggtgctgcggaacgctggtaccaaagtgaagctgctcattgccaga
gatattacgaaggacaaccagctctcctctcctaccctgagccatgacagcttggatggc
aagctcagtgactggaatgaagactatgagttcagtgtgcagttcactaaaaacacctgc
ggcctgggattgaccatctccagctacataggtgacttgaactcagtctacagtgccggt
gtggtagtgaagagcatcgtgaaaggcagcactgttgatcaagatggacgcatccatgtt
ggagatataatactctctgtggatggggtgagcctgcagggctgcagtgagcagagggca
atggaggtgctgagaaggacgggtccgctggtcagactgaggttgctgaggaaagcagtg
catctgagtcacatcctgcccccagttcctcccctgcagcccctacgacactcccacagc
ttccatgagggaaatccctacagagtgggcctcaacaagattaaagagacaggaatctgt
tctctgcgtgagatctcctggcaggcagcgtacaccaacagacgaccccaataccatttc
agaaacaacgtgaaactgacagcagacgaagaggacgacctaaggaagaggtggcagcat
gcagttgggccacgatatgaagttattgtgtgtcagctggagcgtttcagtgagtcaagt
ggtctgggcgtcagtctggaggctcgagcaggacatcattacctgtgctccgtcttacct
gaggggcccattggccaaagcaataagatcttcactggagaccagatattagaggtgaat
gggatccctctcattggacagacacataaggaagtcatcaggattctgaaggagctgcca
atggatgtttgcctggtgtgctcacgaattgtagccccttcagttcctgacaatgatgac
gaagatgatgacgatgtccatctcaccctgaaagagctgctggctgagtttaatgacaag
ttggaccagggctgtgtcattccgtgtcccacagctgaggacatgactaagcgtggtgtg
acacccgtgtcgcctcctctggccatgtgggagagagaagctcaggtggtcgagctggag
aaaggcgagtcaggactgggcttcagtatcctggactaccaggatccagaagatgccact
aaaacagttctggtaatccggtccttggtgccaggaggtgtagcagatcgagacggccgc
ttgcttcctggtgaccgactcatgtttgtcaatgaaactgacctggaaggctcaagcctg
gattatgctgtgcatgtgctaaagtccacagcctatggccctgtctgcattggtgttgcc
aaacccctgccactggaattgtgcggcagcttgacacccatctcagaaaggagcacgcag
gtgtcctacgatgaaagcctcatgcaggacatcctgctagctgagggggccgaggacatc
accaacagcttcaactctgaggacagcagtgttaccaagcagtgttacagtaaaacggaa
aatcagctgcgtaatcgcttcggcgtcatggaagacagcgagagccaccgagccccacct
ctgcccccccgcaccagctttgagaggacaatcactgttgtccggggcaaccgtagcctt
gggatgtcggtgagtgctatcaaggatggctcaggcatgctggtgcgcagtgtgctccag
gggggctctgttagccaggatggcaggctgggggtgggggacgccatcttggccatcaat
ggagaacctacctcccacctgaccaacgccaaggccagggccatgctacgcagacactct
gtcattgggccagaaatgagatctgtccacgcaactcttgacagtcagtgtgactcaaat
aatgtcacctacgtcccagcccgccaggtggatgaacaccgatcccgtctgtgtttgccc
tctctagcctccatcgcagtagacagcatgtctccttcacccactccaccaacacctgaa
cctgaacctgtaccaggcccaggcagatcctttagtccgcacaaagctccagcttcacat
tcacacagccttaaactctccacctcggtcaaagttgaagctgcagctccagattcagcc
acagtcagagtgtctccttcattcaacactacttcaaaaggccgagccatcgtccccacc
atctccccagtgcgagattcaagtatgcagattccaaggtttctccctctcaagaacgta
ggagaacaaaaagaagatactggaaatactccagaagaggaaataagtgctgacgtgaaa
gtaccaaagctagaggtggagataaaggtggacggtaaagacgagggggacgaggaggtc
catcctcgtacctctgtgtcgtgggatcagccgagaagtgtgcgactcactcgagaacca
ggccaatccctcggtatcagcataatgggcggcagaggcatgggccggagactgagcagt
ggagagatgatgaggggagtcttcatcaaacacatcactcccgacagcccggcagcacat
aatggcaccctccggactggagagaggatactagaggtgtgtggcgtggacttaagagac
gccagccatgagcaggcggtggaggccatccgcagggctggggacactgtggactttgtg
gtccaatctggacaacacagatctcagtcaccgatgctcaccaaccacgaaagactaact
ccaacaccgcagtcaaactcacacagcagcaaggaggcacagcctgtcactggtctgatc
cttagtctgtcccccacaaaccccttcactcccaccccctttaaggtaacttcaccagtg
cctgatagaaagaatcggagaagccccataagtgtgacaaccgcaagcgcagcagcagca
gcagcagccaaagatgaggatgacacttgcaggaaaaagatgcttcagcgctatggcagc
ctgtctgggaagctccacatgatcgagttggagaaggaccctgctgttcctggccttgga
ataagtcttgcaggcaacaaagatggctccagagcccgcatgagtgtctttgtgtcggat
atagaccctcgaggtcctgctggtttggatggaaggatacgggttggagatgagctacta
gagatcaatggtcagatcttgtatggacgcagtcaccaaaatgcctccaccatcatcaat
aacgctccgtctaaagtcaagatcattctcgttaggaataagggaactcttagtcaaatg
gcccagagatccagaacggagtgtggggacacagtggattcccacatagaccctgcacac
catgaaggattatcgaaagacatctaccatgtcaaccttcctcaggatcatgttggtctt
ggtctctgcctggcacaaggaaattccggtgatgacatcgtggtcaggtccctaatccag
cagggcacggctgttaaggatggcagaataaagactggagacacaatcatagcagtgggt
gatgaacctgtggcagggatgtcagtagaaaaggtgtccagcttgattctcaaacatcgg
gtcactgtcaagctctccatcaagcgatccgagagtctctcctcttccattctacctctg
tcgtcatctctttccaatccctgctcgctgtctcctacaccctccctacccctccccgct
tccttctcctcctcctcttcctcttcatccctcagtgccatgctgaactctcccacggga
cattctgattggctgggctccacgcccacacctgagcccctaagctgcccagttgtagcc
gggagggaaactacgatagagatttctaaaggaaacataggcctcggcctcagcattgtt
ggaggatgtgacactctgttgggggcagtagtgatacatgaagtaaatgatggaggtgca
gctcagagggatggaaggctgcaggctggggaccagatattagaggtaaatggcatagac
ctgcagcaggccactcacgatgaagcgatcggtgtgctgcggctcaccacccaacgtgtt
cgcctgcgcgtcttcaggtaccaggaggcctacagggaggaggacctgtgggatgttttc
agcatggagctcagacctcgtcctggggaggggctggggttcaccactgtgggaaagagt
aatgacacgggcatctttgtgtcagatatcatcagaggaggcgcagcagatttggatggc
aggttgttgctaggtgaccagattctgtcaatcaatgacgtggacgttcgtgcagcagca
caggaacatgcgcagaagctactacagagttacagtggaatggtccagttggaggtggct
cgttttaaagctggactgcagtactcacagcgaagccaggagtactttaagttgtgtttt
atccagagtgaagactctgactgttccaccctgaccccctcaagtggatgtgatgctcca
tttgtccaccagagggagacaacagataacaaaacagggagatacaccgttcaaaacttc
cctgactccagaaaagtagtattacataagggtccaagtgactcccttggcattactgta
gcgggaggagtgggcagtccccatggcaacgtacctctttttattgctaccacggatacc
aatggactgactgtcaaaacacagcaattacagacaggagacaagctcctcagtatcaat
gatgtgtccactgagggaatgactcatgtccaagctcaagccctgttgaacaatgccact
ggaagcatcagtctgcaggtggcagcaggttctggtgagtgcagcacacgggacaacagt
gatgcacagtcgttaagccaagccggcagcctgcctcgctttcacaacaacctctgtgct
cgtacgtataaaaccatcactctggagaaagactcctcaggactgggcttcagcatagtt
ggaggattcggtagtcctcatggagacctgccgatctacgtcaaaactgtcttcaacaag
ggggcggctgtagcagacggtcggctgaagcgtggagatcagatcattgccgtgaacgga
cactgcctggagggggtgactcacgccgaagctgtggacatcctcaagaagaccaaggga
agtgtagtcctcactgttctctcctag
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