Solea senegalensis (Senegalese sole): 122771449
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Entry
122771449 CDS
T07721
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122771449 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122771449 (exosc1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122771449 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122771449 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
122771449
NCBI-ProteinID:
XP_043884961
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Position
LG6:complement(7768787..7772511)
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AA seq
211 aa
AA seq
DB search
MSPMKLCVPGDKLCSTEDCIPGTGVYLRHGYIYSSLAGYVLRKNEGEEVRGVVAAVGRRV
RHVIQLPVISVVRETETQLLPDVGAIVTCKVTSINPRYAKVHILYVGSTPLKDRFRGTIR
KEDVRATEKDKVETYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSETGVQM
VPISWCEMQCPRTHNKEFRKVARVQPEYLQA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaaactgtgcagcacagaagactgtatt
cccggcacaggagtatatctacggcacggctacatatactcctcactagcgggctatgtg
ctgagaaaaaacgaaggagaggaggtgaggggtgtggtggctgctgtgggtaggagagtc
aggcatgtgatacagttacctgtgatctcagtagtgagggaaacggaaacacagctgctg
ccagatgtaggagcaatagtcacctgtaaggtgaccagcatcaaccccagatacgccaag
gtccatattctctatgtaggttccacaccactgaaggaccgctttagggggaccatcagg
aaagaagatgtacgcgcaacagaaaaagacaaggtggaaacatacaaaagcttcagacct
ggtgacatcgtccttgcaaaagtgatttccctcggtgacgttcagtccaactacttgtta
acaactgcagagaatgagttgggagttgtagtggcacacagtgaaacaggtgtccagatg
gttcccatcagctggtgtgagatgcagtgtccaaggacacacaacaaagagttccgcaaa
gtggcgcgtgtgcaaccggaatatctacaggcatga
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