Solea senegalensis (Senegalese sole): 122771513
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Entry
122771513 CDS
T07721
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen00310
Lysine degradation
ssen00514
Other types of O-glycan biosynthesis
ssen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122771513 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122771513 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssen01003
]
122771513 (colgalt1b)
Enzymes [BR:
ssen01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122771513 (colgalt1b)
Glycosyltransferases [BR:
ssen01003
]
O-Glycan biosynthesis
O-linked Gal type
122771513 (colgalt1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
MT-A70
Motif
Other DBs
NCBI-GeneID:
122771513
NCBI-ProteinID:
XP_043885063
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Position
LG6:complement(8118749..8130312)
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AA seq
609 aa
AA seq
DB search
MPRVTSLLPALLFVLLPGLSRGYFPEERWSPESPLLAPRVVIALVCRNSAHSLPLFLGAI
ERLNYPKDRIALWVATDHNTDNTTAILREWLIKVQNDYHYVEWRPEDEPSVFEDELGPKH
WNNLRYEHVMKLRQAALDIAREVWADYLLVADCDNLLTNQDVLWKLMMENKTIVAPMMES
RAAYSNFWCGMTSQGYYKRTPAYMPIRKRERQGCFAVPMVHSTYLLDLRKEASRQLAFYP
PHSEYTWALDDVIVFAYSARMADVQMYVCNKETYGYFPVPMRSHATLQDEEESFLHTHLE
VMVKNPPLEHSSFLSPPPKQPNKIGFDEVFMINLVRRSDRRERMLRTLYEQELSCKVVAA
VDGKALNVSEIDSMGIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIVDRGLQTSLVI
EDDLRFEVFFKRRLQTLLQEVTTHKLDWDLIYIGRKRMQVDHPEKSVPNIHNLVEADYSY
WTLGYMLSLRGAEKLLGADPLSKMLPVDEFLPVMYDKHPVSEYMDHFENRDLHAFSAEPL
LVYPTHYTGDSGYISDTETSVVWDNETVKTDWDRAKSRKTQEQEELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggtcacctcgctgctgcccgccctgctgttcgttctcctgccgggcctgagc
cggggatatttccccgaggagcgctggagccccgagtctccgctcctcgctccccgggtc
gtcatcgccctggtctgccgcaactcggcgcactccctgccgctgttcctcggtgccatc
gagcgcctaaactacccgaaggaccgcattgcgctgtgggtggcgacagatcacaacact
gataacaccacagccatcctcagagagtggctcatcaaagtgcagaatgactatcactat
gtggagtggagacctgaagatgaacccagtgtctttgaagatgagttggggcctaagcac
tggaataacctccgctatgaacatgtgatgaaactccgtcaggcagctctggacatcgcc
cgcgaggtctgggccgactacctgctggtggctgactgtgacaacctgctcaccaaccag
gatgtcttgtggaagctgatgatggagaacaagaccattgtagctcccatgatggagtcc
agagctgcatactccaacttctggtgcggcatgacttcacagggttactacaagcggact
ccggcttacatgccaatccgtaagcgggagcgtcagggctgcttcgctgtacccatggtc
cactctacctacctgttggatttaaggaaagaggcctcccgtcagctcgcgttttatcca
ccgcactccgagtacacctgggctctggatgacgtcatcgtctttgcctactcagctcgc
atggcagatgtgcagatgtatgtgtgcaacaaggagacttatggctacttcccagtgccg
atgcgctcccacgcaaccttgcaggatgaggaggagagcttcttgcacacacacctcgag
gttatggtgaaaaatcctccattggagcactccagcttcctgtctcctcctcccaagcag
cctaacaagatcggctttgatgaggtgttcatgataaatctggtgcggcggtctgaccgg
cgtgagcgaatgctaagaactctgtacgagcaggagctcagctgtaaggttgttgctgct
gtggatggcaaagctctgaatgtgtctgagatagattctatgggaattaagatgctgcca
gggtacaaagacccttatcacggccgacctctcaccaagggtgaactgggttgtttcctc
tctcattacaacatctggaaggagatcgtggaccgcggtctgcagacctccctggtcatc
gaggacgacctccgcttcgaggtcttcttcaaacgtcgcctccagacgctgctgcaggag
gtgacgacacacaagcttgactgggacctcatttacatcggacggaagcgcatgcaagtg
gaccatccagagaagtctgtacccaacatacacaatcttgtggaggccgactactcctac
tggacgctaggctacatgttgtcattacgaggagctgagaagctcctcggggccgatcct
ctgagtaagatgcttcctgtagacgagttcctccccgtcatgtacgacaaacatccagtt
tcagagtacatggaccactttgagaaccgggacctgcacgccttctctgccgagcctctc
ctcgtttacccgacccattacacgggagactccggctacatcagtgacaccgagacctcg
gtggtgtgggacaatgaaacggtcaaaaccgactgggaccgagccaagtccaggaaaact
caggagcaggaggagctgagttttgaggcgcagaactcagatgtgctgcagtcggagctg
gagaactggagcgcccgggacgagctgtga
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