KEGG   Solea senegalensis (Senegalese sole): 122771617
Entry
122771617         CDS       T07721                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122771617 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssen03021]
    122771617 (taf5)
   03036 Chromosome and associated proteins [BR:ssen03036]
    122771617 (taf5)
Transcription machinery [BR:ssen03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122771617 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     122771617 (taf5)
Chromosome and associated proteins [BR:ssen03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     122771617 (taf5)
    STAGA complex
     122771617 (taf5)
    TFTC complex
     122771617 (taf5)
    SAGA complex
     122771617 (taf5)
    SLIK complex
     122771617 (taf5)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_CDC20-Fz TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 NBCH_WD40 DSE1_N PAC11 Beta-prop_Aladin Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st CFAP251_N WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR19_1st ASA1 Beta-prop_SPT8 Beta-prop_NOL10_N WD_LRWD1 Beta-prop_DCAF12 Tricorn_2nd LisH_PAC1 PEP5_VPS11_N DNAI3_WD Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_ELP1_1st eIF2A Beta-prop_ACSF4 RAB3GAP2_N Beta-prop_RIG_1st LisH_TPL
Other DBs
NCBI-GeneID: 122771617
NCBI-ProteinID: XP_043885221
LinkDB
Position
LG6:complement(7262641..7267358)
AA seq 751 aa
MAAVQGGLVDADNEKDIKTEPPSDGWVNNNANDGKVLSASPGSSATAGSNKPAAATTATA
AGTPEDQQTLLAVLQFLRKNNLSESVEILRREAGLPENSLEAKAGDSSGTGDADTDAGDS
SSLLSRVTVSSSARAPSPKKATAGEDQPDVNVVLSAYSQQGDPALYDVYYSGLKKFIETV
LDCHRAELSQVFYPLFVHMYLELVYNNHESEAKAFFGKFSGDQECYYEDDLRILSSLSKK
EHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGIPRS
KSQIDAMSGSLAGEGRREANKTKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKD
SMGSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFYTFLN
AYQGLTAVDFTDDSSLIAGGFADSTVRVWSITPKKLRKVKSAADLNVIDKESDDVLERIM
DEKTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLLTFTCLVGYKGHNYPV
WDTHFSPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYLATGSSD
RTIRLWDVLNGNCVRIFTGHKGPIHTLAFSPNGKFLASGATDGRVLLWDIGHGLMITELK
GHTDTIYSLKFSRDSEILASGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSLEL
LLGTYMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq 2256 nt   +upstreamnt  +downstreamnt
atggcggccgtacaaggtggtctggtcgacgcggataatgagaaagacataaaaacggaa
ccaccaagcgatggatgggtaaataacaatgcgaacgacggcaaagtgctctccgcgtcg
cccggctccagcgctacagctgggagcaacaaaccggcggcggcgacgacggcaacggcg
gcgggaaccccggaggaccagcagacgctgttggcggtcctgcagttcctcagaaagaac
aacctgagcgagtctgtcgaaatattacgccgtgaagcgggtctaccggagaattcactc
gaagcgaaggcgggagactcgtctgggactggagatgcggacacagatgccggtgattca
agctctcttctcagccgggtgaccgtctcatcctcagccagagcaccgtcgccgaaaaaa
gctacagctggggaggatcagccagatgtgaatgtggtcctgtcagcttacagccagcag
ggagacccagctctgtatgatgtttactacagtggcctgaagaagttcatagaaaccgtt
ttggactgtcacagggcagagctgtcgcaggtcttctacccactgtttgtgcacatgtat
ctggagttggtgtacaacaatcatgaaagcgaggccaaggctttttttggaaagttcagt
ggggaccaggagtgctattatgaagatgacttgcgtattttgtccagcctttcaaagaag
gagcacatgaggggcaatgaaactctccttgacttccgcacgagcaaatttgtcctgcgc
atctcccgtgattcttaccagcttctgaagagacacctgcaagagcggcagaacaaccag
atctggaatattatccaagaacacctctacattgacatttttgatggcattccacgcagc
aagagccagattgatgccatgtccggcagcttggctggagagggaagacgagaagccaat
aagaccaaggtttactatggattactgaaggagcctgagattgagcttccccttgatgat
gaggatgaggaggcagagaacgaggaggggaaacccaagaagaagaaaccaaaaaaggac
agtatgggctccaaaagtaaaaaacaggatccaaatgcaccctctcaaactaggatacct
ctgccagaattaaaggattcagacaaactagataagatcatgtacatgaaagaagcgacc
aagaggatccgtctaggaccagataacctcccgtccatctgcttctacactttcctaaat
gcataccagggtttgactgcagtggacttcacagatgactccagtctgattgcaggaggc
ttcgctgattccacagtgcgggtgtggagcatcacaccaaagaaactccgcaaggtcaaa
tctgcagcagacttgaacgtgattgacaaagaatctgatgatgtgctggagaggatcatg
gatgagaagacggccagtgagtcaaagatcctctacggacacagtggtccagtatatggc
atcagcttcagcccggacagaaactaccttttatcaagttctgaagatggtactgtcagg
ctgtggagtcttttaacatttacttgtctagtgggctacaagggccacaattacccagtg
tgggacacccacttttctccccatggctactattttgtctctggaggacatgacagagtt
gcccgtctttgggcgacggatcactaccagcctctacggatattttctggccatctagcg
gacgttacctgcacccgctttcaccccaactccaattatttagcgacggggtcatctgac
cgcaccatccgcctctgggatgtccttaatggaaactgtgtccgtatattcacaggccat
aagggtcctatacatacgctggctttctctccaaatgggaagttcttggcctctggagcc
acagatggaagagttcttctgtgggacattggtcatgggctgatgattacagagctcaaa
ggccatactgataccatctactccctgaagttcagcagggatagcgagatccttgcctct
ggttccatggacaacaccgttcgtctgtgggacgcaacgaaagcatttgatgatttagag
accgatgacttcacagcagctacgggacacattcatctacaagataactcgctggagctg
ctgctgggcacctatatgactaaatcaacacctgtcatacaccttcacttcacccgaagg
aacctactgttggctgctggtgcctacaatccataa

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