Solea senegalensis (Senegalese sole): 122771676
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Entry
122771676 CDS
T07721
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122771676 (toporsa)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122771676 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssen03037
]
122771676 (toporsa)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122771676 (toporsa)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122771676 (toporsa)
UBL E3 ligases
122771676 (toporsa)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122771676 (toporsa)
Cilium and associated proteins [BR:
ssen03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122771676 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
PWI_Topors
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
122771676
NCBI-ProteinID:
XP_043885315
LinkDB
All DBs
Position
LG6:complement(23335937..23340976)
Genome browser
AA seq
802 aa
AA seq
DB search
MSAIKIALQQNQKSGRRKKSEAMSAEVSPDSKCPICLDTFNNISYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHSIKSEQDFKKYDLQPLNNGSFGTFGGVRFRYRTTLTGVHG
QMRGRTSPPPDNGVMFEGSTMSSQQHQDRYIQRMMTRLAAKRRAAREGRAVSNVREQEMI
NFRRELYRQGVKVRTVRDGGRLRDNSAEFYRRNPACLHRLVPWLKRELIVLYGSHGSLVN
IVQHVIMSRITRFDMEDGAIQEELRPFIQGRTEHFLHEFISFAKSPFNMEAYDQHAVYDC
PAASSNEDSSSNSSVIAISEDEEQSMGLDLPGDSMSNLSHSVWDDETPGPSYSTTAEQSR
VEHLSVLDSESDSESDSSLEEETQEFGTSLQHMCSHSQTDMALRGANNEESVCLYSDNDD
CLIIGFVKPTADRTPELVQLSSDSDEFDTEETKEVPLLPQHIRFSSLSPPVSQNSNRGDA
EQSGNIETDHHHQLDSKKRSDRHKTSSKSDRKERHWSKDKDHRRRRRSGSRERRHSSRSP
AILQSSVSALSREKCHSYLSSRDSPVKCDSNYKRRDNYRNYQSYSHYSKERNEGGMHYTE
KRSYYYSSRKYPDRHLSRSRSRSRSIDSRRHDRRYSRSYSRSRSPSLKGRSHHDKPGGKR
KYKTRHLEEPSKDTLSKSCEGDSSTISSKHKKKSKEKRRKKSKERSRKTSRSLSVELINE
ENAHERGRRHHKKKKKHKKRSKRHKSHERTEKHSPTVITIDSDSDHFANICVTQASSSTH
KDNPVDSTTDDLVDPASLTSLS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaatcaagattgccctgcagcagaaccagaagagtggcagaaggaaaaaatct
gaagccatgtctgcagaggtgtcgccagactctaagtgtccaatctgtttggacacattt
aacaacatttcatatctggatctctgtctgcacaagttctgcttccgttgtattcatgag
tggtcgaagaacaaagcggagtgtccattatgcaaacagccattcaattctatctatcac
agcataaaatcagagcaagactttaagaaatatgacttgcaaccgttaaataatggctct
tttgggacctttgggggagtgcgttttaggtaccgcacaactcttactggagtccacggg
cagatgcgtggaagaacctctccacctccggacaatggagtaatgtttgaaggctcaaca
atgtcttcccaacaacaccaggaccgttacatacaacgcatgatgacgaggttggcagcc
aagaggagagctgcaagggaaggccgggccgtgagcaacgtcagagagcaggaaatgatc
aacttcagaagagagctgtatcggcaaggggttaaggttcggactgtccgagatggtgga
cgcttgcgcgacaactcagcagagttttaccgcagaaatcctgcctgccttcatagattg
gtcccatggcttaagagagaactcattgtgctatatgggtctcatggctctttggtcaac
atagttcagcacgtcatcatgtcacgcattacacgttttgacatggaggatggagccatt
caggaagagctcaggccattcatccaggggcgcactgaacactttttacatgagttcatc
agctttgcaaaatccccatttaatatggaagcctatgaccagcatgcagtgtacgactgc
ccagctgcttcgtcaaacgaagacagcagctccaactcatctgtaatagccatctcagag
gatgaggaacagtccatggggttggacctcccaggagattccatgtctaatttgagtcat
tctgtttgggatgatgaaacgccagggccatcgtattctacgacagcagagcagagcagg
gtggagcatctatcagtcctggactccgagtcggactcggaatctgacagcagtctagaa
gaggagacacaagagtttggaacttctctgcagcacatgtgctctcatagccaaacagac
atggctcttcgcggcgctaacaatgaagagtctgtctgtctgtattctgacaatgatgat
tgtctcatcataggctttgtcaagccaacagctgacaggactccagagctggttcagctg
tcttctgactctgatgagtttgacactgaagaaaccaaggaagtgcctcttttacctcaa
cacatccgtttcagcagtctcagtcccccagtttcacagaatagcaatcggggtgatgca
gaacagtcaggtaacatagaaacagaccaccatcatcagcttgattcaaaaaaaagatcg
gatagacacaagacatccagtaagtcagatagaaaagagaggcactggtcaaaggacaaa
gaccacaggagaagacggagatctggtagtagagaacgcagacattcaagcaggagccca
gccatcctgcagagcagtgtcagcgctctatccagggagaaatgtcattcttacttaagc
agcagggactcgcctgtaaaatgtgacagtaattacaaaaggagggacaattatcgaaat
tatcagtcctatagtcattacagcaaagagagaaatgaaggcgggatgcattatacagag
aaacggtcttactattacagtagtcgcaagtacccagataggcacttgtcgcgctctcgc
tctaggagccgtagcatagattcacggagacatgacaggaggtattctcggtcttattcc
aggagtcgctctccttcattaaaaggtagatctcaccacgacaagccgggtgggaagagg
aaatacaagacgagacatttggaggaaccgtccaaagacacactttccaaatcatgtgaa
ggggactcctccacgatctcatcaaaacacaagaaaaagagcaaagagaagcgcagaaaa
aaatctaaagaaaggtctagaaagactagcaggagcctcagtgtggagctaatcaatgag
gaaaacgcacacgaacgaggcagacgccatcataagaaaaagaagaaacacaagaaaagg
agcaaaaggcacaagagtcatgaacgcacagaaaagcactcacccactgtcatcaccatt
gacagcgacagcgatcattttgctaatatctgtgtcacccaggccagcagcagcacacat
aaggacaaccctgttgacagtaccacagatgacctagtagaccctgcctctctgacgtcg
ctatcataa
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integrated database retrieval system
