Solea senegalensis (Senegalese sole): 122771920
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Entry
122771920 CDS
T07721
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122771920 (irx5a)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122771920 (irx5a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
122771920
NCBI-ProteinID:
XP_043885430
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Position
LG7:complement(15204170..15207977)
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AA seq
460 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVVSKLKSSPYDHTTGMAGSIGYHPYATPLGTYPYGDPAYR
KNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWTPRNRSEDEEEDENIDLEKNDDDEPSKPTDKGESTDTEADHKLLNPGDMGCDRFKEES
HGKDTDPLLSDSELQEQEERTTDLLPDSAKPTTSSPSTLPRGNQTVAQQDKPSDLSHAPS
SVTSNVTSVIHSPPSAPKPKLWSLAEIATSSDRCKSSSSSSDAPQACPGLGQSAVMSTNA
SPSRSSPQCPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVTTGSTAHFNGLN
QTVLNRAEALVRESQRVRGQTQVDLCKDSSYELKKGMSNI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcttctctagccctgtattcgtgt
cctgcgtacagcaccagcgttatatccggaccccgaaccgaggaacttgggagatcctcc
tcgggatctgcttttgcgccctatgccggatctactgcgttcaccagcgcctcgccaggc
tacaactcccacttaccatacagtgcagacgcggcggcagctgccacattcacctcgtac
gtggtgagtaaactaaagagttctccttatgaccacaccacgggcatggccggctcgata
ggataccatccctacgcaacgcccttgggcacctatccttacggtgacccagcgtaccgt
aaaaatgcaacccgggacgccacggccaccctgaaggcctggctcaacgagcaccgcaag
aacccttatccgacaaagggcgagaagatcatgctggccatcatcaccaaaatgaccctc
acccaggtgtccacctggttcgccaacgccaggaggagactaaagaaggagaacaagatg
acctggactccccggaaccgcagcgaggacgaggaggaggacgagaacattgatttggag
aaaaacgacgacgacgagccaagcaagcccacggacaagggggaatccacagacacggaa
gcagatcataaactgctgaacccgggggacatgggctgtgacagatttaaagaggagagc
catggcaaagacacggacccccttctcagcgactcggagttacaagagcaagaggagcgg
actacagacttgctgccggattccgcaaaaccaaccacttcttccccctccacgttgccc
cgggggaaccagaccgttgcgcaacaagacaagccgtcagatttgagccatgcaccgagt
tcggtgaccagcaacgtgacctctgttatccactcgcccccttcagcccctaaacccaaa
ctctggtccctggcggagatcgccacgtcctcggacaggtgtaaaagcagcagcagcagc
agcgacgcgccacaggcttgtcccggcttgggccagagcgcagtcatgagcaccaacgcg
tctccatcacggtcctccccacagtgtccgctccccaacagcactgtcctgtccaggccg
ctgtactacacctcccctttctatcccggctacacgaactatggcggcagctttggacac
cttcacagtaaccacggctcggtcaccacgggctccacggcacatttcaatggattaaac
cagactgtgttaaatagagcagaggctttggtaagagagagccagagagtcagaggccaa
acgcaggtagatctttgtaaagactcctcttatgaactaaagaaaggtatgtcaaacatt
taa
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