Solea senegalensis (Senegalese sole): 122771928
Help
Entry
122771928 CDS
T07721
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122771928
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
122771928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Microp_apicomplexa_15
LPD1
Motif
Other DBs
NCBI-GeneID:
122771928
NCBI-ProteinID:
XP_043885445
LinkDB
All DBs
Position
LG1:10667389..10691983
Genome browser
AA seq
1163 aa
AA seq
DB search
MLHAMDRDAASPVSVATTTKKAVGGISAPEAAAASTCTRSNSGHSCLDTGSSRAPTAEQP
GVATNVEMDETEDGEEEPKFQHPRLRRAGGSGSGGSGGGGGGGGGGGGGSIRMKNFTPGG
GAASSASRRNSNKEPCLTHTEDAAAAPRPSAASRATNTQTPCPGDAVLRGETNRASRAEA
SESAEKVVGATAGDVCVAPISSMKCNKNGECRRDSGTGSLRSIISKQEKQTGGSGRAEDA
GSAKRGACNSTTASMDGSITPGGSLTGGHGGDSANPVSGGVPEKKDSKVSFSNAPSRKAS
SSLHGPTHTQQPRNSVTFQKPEDGPQIMPAEDAEPRGSQASFMQRQFSSMLQPGVNKFSL
RMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEET
TTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKTKYLKTWFIVDFISSIP
VDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDL
ASAVMRIINLIGMMLLLCHWDGCLQFLVPMLQEFPSDCWVSLNKMENDTWSELYSFAVFK
AMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEKY
KQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVNFNCRKLVA
SMPLFANAEPNFVTAMLTKLHFEVFQPHDYIIREGTIGKKMYFIQHGVCSVITKGTLAMK
LSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAFETVAIDRL
DRIGKKNSILMHKVQHDLNSGVFNNQENEMIQEIVKYDREMVKLVDLQRPRAMSMTPSIG
GIFAPPGQSQTGSAIATLQQAVAMSFCPQMASPLVGPGSLQSPRMVRRFQVMQNLSSPVS
MSPLQSQPPQTLGGAFGSAISSPPVQSPLAVSGRTFQYMASAGPSGSQLSLVQHHAPSPT
YTQQRPASHKSTHSLHTGSLSQDTRALSASQPSLPQEGTPQAASAAPSPPPSTRTSNTSI
GPPQPTHPGLPGSSGVGRSVGGQQRVAFASTPPPGGPAAAAAAAAAAAAAAGAGPPDSGV
PKKDSIVSLPELDSARSRLSSNL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgccatggacagagacgcggcttcaccggtgtctgttgctactacgacaaag
aaggcggtgggcggcatcagcgcacctgaggctgcagccgcgtccacatgcaccaggagc
aacagcggccacagctgtctggacaccggctcctctagagcaccgaccgctgagcagccc
ggtgtggccaccaacgttgagatggacgagaccgaggacggagaagaggagcccaagttt
cagcatccgcgtttgcgccgagccgggggaagcggcagtggcggaagtggaggaggagga
ggaggaggaggcggaggaggaggaggcagtatcaggatgaagaactttacaccaggaggg
ggagccgcgtcctcggcttccaggagaaactccaacaaggagccctgccttacgcacact
gaggacgctgctgccgctccacggccctccgctgcctccagagccaccaacacccagaca
ccctgtccgggcgatgccgtcctgcgcggcgagaccaacagagcatccagggcggaggcg
tcggaatcagcggagaaggttgtaggagcgacagcgggtgatgtgtgcgttgctccaatt
tccagcatgaaatgcaacaaaaacggagaatgcaggagggactctggtaccgggagcctg
cgctcaatcatctccaagcaggagaagcagacaggagggtcggggagggccgaggacgca
gggagcgccaagcgaggagcctgtaactcgaccaccgccagcatggacggctccatcaca
ccaggtgggtccctgaccgggggccacggaggagacagcgcaaaccctgtgtccggcggc
gtccccgagaaaaaggactccaaggtgtccttttcaaacgcaccgagccggaaagcctcg
tcctcgctgcacggcccgactcacacccagcagccgcggaactctgtcactttccagaag
ccggaggatggaccgcagatcatgcccgccgaggatgcggagcctcggggcagccaagcc
agcttcatgcagcggcagtttagcagcatgctgcagccgggagttaacaaattctcctta
cgcatgtatggcagtcaaaaagcggtggagagggaacaggagcgggtcaaatcagctgga
aattggattatccacccgtacagtgatttcaggttctactgggatttcacaatgctgctg
tttatggtgggcaacctgatcatcatccccgtgggcatcaccttcttcaaggaggagacc
actacgccttggatcatcttcaatgtggtgtcagacactttcttcctcatggacctggtg
ctcaactttcgcactggaatcatcattgaggacaactcggacatcattttggacccaaaa
accattaagacgaaataccttaagacttggttcattgtggactttatatcctccattcca
gtggattacatattcctcatagtggagaagggaatcgactcggaggtgtacaagactgct
cgagccttgaggattgtccgttttaccaagatccttagtcttctgagactgttgaggcta
tccagattaatacgctatattcaccagtgggaagagatcttccatatgacctatgacttg
gccagtgcggtgatgcggatcattaatctgattggtatgatgctgctgctgtgtcactgg
gacggctgcctacagttcctggttcccatgctgcaggaattcccctcagactgctgggtg
tctcttaacaagatggagaacgacacgtggtcagagctctactcctttgctgtattcaaa
gcaatgagccacatgctgtgcatcggttatggccggcaagccccggaaagtctgtctgat
atctggctcaccatgctgagtatgattgtaggagctacttgctatgctgttttcattggc
catgcaacggctcttatccagtccctggactcctccagacgtcagtatcaggagaagtac
aaacaagtggagcagtatatgtccttccacaagctgcctgctgacttcagacagaaaatc
catgactactatgagcacagataccagggcaagatgtttgacgaggagagcattctggga
gaactcagtgagcctctcagagaggaaattgtcaacttcaattgtcgcaagctggtggcg
tccatgccgctgtttgccaatgccgagcccaactttgtgacagccatgttgaccaagctg
cactttgaggttttccagccacatgattacatcataagggagggcacaattggaaagaaa
atgtactttatccagcatggagtctgcagcgttattaccaagggcaccctcgctatgaaa
ctctctgatggctcttattttggagaaatctgtttattgacgaggggtcggcggacagcc
agcgtgcgagcagagacttactgtcgactctattctctgtctgttgaccactttaatgag
gtgctggaggaataccctatgatgagacgagcctttgagactgttgccattgaccgtctg
gaccgaataggtaaaaagaactccatcctgatgcataaggttcagcatgatctcaactct
ggtgtcttcaacaaccaggagaatgagatgatccaggagattgtcaagtatgaccgtgag
atggtgaagctggtggacctgcagcgcccacgagccatgtccatgaccccttccattggt
ggtatctttgctcctcctggtcaatcgcagacaggctctgcaattgccaccctccaacaa
gctgtggccatgagcttctgtcctcagatggcaagtccattggtgggtccaggctctctg
cagtctcctcgtatggtgcgaaggtttcaggtgatgcagaacctgtccagtccagtctcc
atgtctcctcttcagtctcaaccacctcagactcttggaggagcattcggctcagcaatc
tccagccctcctgtccaaagcccccttgcagtttcaggacggactttccagtacatggca
agcgcaggaccctctgggtcccagttgtccctagtacagcatcatgcacccagcccgaca
tatacccagcagaggcctgcctcacacaaaagcacccactcccttcatacaggcagcttg
agccaggacacccgggccctttctgcctcccaaccttcacttccccaggaaggaacacca
caagctgcctctgcagcccccagccctccaccctctactcgcacctccaacacctccatc
ggtccccctcagcccactcacccgggcctgcccgggtcctcaggggtggggagatcagta
ggaggtcaacaaagggtggcctttgcctccactccgcctcctggtggacctgcagcagca
gcggcagcggcagcagcagcagcagcagctgctggagccggacctccagactctggagtt
cccaagaaagattcaattgtcagccttccagagctagactctgccagatcccggctgtct
tccaacttgtga
DBGET
integrated database retrieval system
