Solea senegalensis (Senegalese sole): 122771938
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Entry
122771938 CDS
T07721
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122771938
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122771938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
DUF494
HTH_3
HTH_31
HTH_26
HTH_24
Motif
Other DBs
NCBI-GeneID:
122771938
NCBI-ProteinID:
XP_043885454
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Position
LG7:complement(17442221..17454359)
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AA seq
539 aa
AA seq
DB search
MRNRGDILGKLSVSVCAGAPRQHIYGGINVGGGSATGILRMFQQCEEPRFTIEQIDLLQR
LRRTGITQAEVLHALDTLDHLDRHKSTDKPSYMPPSSSSTVAASSSTTSAATQTNFPDNQ
LSASPSHTFDATALPLPVPVASPVIMTAGAQNGLVGVSNGKLSPPRFPLGVVSGGMSAPG
YGFEASEEDIDVDEKVEYLMRRDSVLIKEEIKSFLANRRISQAVVAQVTGISQSRISHWL
LQQGSDLSEQKKRAFFRWYQLEKSNPGATLAMRAAPLALEEVMDWPQAPPTFGAAPAGFR
LRRGSRFTWRKECLAVMESYFGDNQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLK
VYNWFANRRKDIKRRANIEAAILESHGIEVQSPGGQSNSDEVDGNDFPDQGCEMTSFDKR
ASVRQFGFSRADLSSPTQVPTLLPSWLSVLGRGHLSGQRGTSLIGRSPVIGTGPQAEGSR
LTGVSWSPPSPSLQDEPTIHSVLSEPQDPIGLEKTAANHEDGAGCSMGNEIKMETLEDD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacagaggagacattttgggaaaactgtcagtgtccgtgtgtgctggcgccccg
agacaacacatatatggtggaataaacgtcggcggaggctctgcgactggaatattaagg
atgttccagcagtgtgaggagcctcggttcaccatcgagcaaattgacctcctccagagg
ctgaggaggacggggatcacccaggcggaggtcctgcacgccctggacaccctggaccac
cttgaccgtcacaagtcgacagacaaaccttcctatatgccaccctcatcttccagcact
gttgccgcctcttcctccacgacttcagctgccactcagacgaactttccagacaaccaa
ctctcagcatcgcctagccataccttcgatgccaccgctctgcctcttccggttccggta
gcctcgccggtcatcatgaccgcgggagctcagaatggtctggttggtgtcagcaatggg
aagctgtcaccaccccgctttcctcttggtgtggttagcggcggcatgtcggcaccaggc
tacgggtttgaggccagtgaagaggacatagatgttgatgaaaaggtggagtacctgatg
agaagggacagcgttttgatcaaagaggagattaagtccttcctggcaaacaggcgaatt
tcccaggctgtggttgctcaggtaacaggtatcagtcagagtcggatctcccactggctc
ttacaacagggatcggacctcagcgagcagaaaaagcgggccttctttcgctggtaccag
ctggagaagtccaacccaggtgccactctggccatgcgagctgccccactggctctggag
gaggtgatggactggccacaagctccgcccacctttggtgctgcccctgcgggcttccgt
ctgcggcgggggagcaggttcacatggaggaaggagtgtctggctgttatggagagttac
ttcggtgataatcagtaccccgatgaagcgaagagagaggagatcgctaatgcctgcaat
gctgtcattcagaaaccaggaaagaagctgtctgatttggagagagtcacatccctaaag
gtctacaactggtttgccaaccgacgtaaagacatcaagaggcgtgctaacattgaagca
gccatcttggagagtcacggcatcgaggtccagagtccaggaggtcagtccaacagtgac
gaggtggacggcaatgacttccctgaccagggttgtgagatgacttcatttgacaagaga
gcttcagtcaggcagtttggtttcagtcgagctgacctctcctctccgacccaggttccc
acgctgcttcccagctggttgtccgtcctgggtagaggacacttgtctggacagaggggc
acttctttgatcggccgctccccagtgatagggacaggtcctcaggcagaaggctccaga
ttgaccggcgtgtcctggtctccaccgtccccctccctccaggacgaacccaccattcac
agcgtgctgtccgagccccaggatccaatcgggttggagaagacggcggccaatcacgag
gacggggccgggtgcagtatggggaacgagatcaagatggaaacactagaggacgactga
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