Solea senegalensis (Senegalese sole): 122771999
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Entry
122771999 CDS
T07721
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122771999
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122771999
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122771999
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122771999
Cell adhesion molecules [BR:
ssen04515
]
Cadherins
Protocadherins
122771999
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122771999
NCBI-ProteinID:
XP_043885545
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Position
LG7:5770491..5775720
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AA seq
891 aa
AA seq
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MNMINCRRPSRSNRGGIWGWCILLLHISPLSCFANFSQAKELIYKIKEGLPTGTFIGAIG
VDLKLDFTVQPPFLFNLPQKEVIQQYVNLNNTTGELYTSATEIDRETLCPDNSARHGCVL
SLDVFLLPQQHFQLIKVKIIIEDVNDNRPKFPVNEICISVPENTHVSARFAVEHSAMDPD
LGSHGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVTEALDREKQAEYITDIIAEDGGTP
PLLGAATFKIVITDVNDNCPQFTATHINISLHGNTSKGAHLARLHAFDPDLGVNAQISYA
YSDRVPRDTRSLFHLDKITGLIKLAAKIDSVTATFYKLTVLANGPGCIPAVATVTVHIIK
DITGPPAVIPRYIAPEKDGVVTVKESEPAFSPIAFFTVKNIGKNQKVDCSLEGTGPFRLG
PYKQLKNEYLLETTEPLDYEKTQDYDLIVVAKNTQGLVIKTYLKVQVLDENDNAPEFQQS
LVEISIEENNPPNTFLTQLQATDLDGEGRGEVNYLLGGDAPGMFAVDRVTGVLTVATSLD
REEKEKYRFIVRAVDQGTPRRESIATVLLTVQDRNDNSPRFINKDFTFFVPENFPGYGEI
GVLSVTDADAGENGWVALSILNGSDIFMIDTGRGTLRTMTLLDREQQGTYHLWIEAIDGG
QPALSCVAMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFAIDPDTGNITLKRELNNRGLYSLLVKVSDHGQPEPLYSMVTVN
FFVNETVSNESYIQSLLTKEADIEIEERPWYVGQMTEGPERYELCPCQPALIFLSVTCLG
LFCLVVGLTAYICRSRFKKSRKRRSEVEMPLKMKNDSMQIVNGKLRQISDT
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatcaactgcagacgccccagtcgtagcaacagaggagggatatggggatgg
tgcatcctcctgcttcacatcagccctctctcctgttttgcaaatttcagccaagcaaaa
gagctcatctataagataaaggagggattacccaccgggaccttcataggggccatcgga
gtcgacttaaagttggatttcaccgtccagcccccctttctgttcaatctcccacaaaag
gaggtcattcagcagtatgtaaacctaaataataccactggggagctttacacatctgct
acagagattgacagggagaccctctgtcctgataactcagcgcgccatggatgtgtcctc
tcgctggacgtgtttttgttgcctcagcagcactttcagctaatcaaagtcaagatcata
attgaggatgtgaatgacaacaggccaaagttccctgtgaatgagatctgtatatccgtc
cctgaaaacacacatgtcagtgctcgtttcgcagtggagcactctgccatggacccggac
ctgggttctcatggagtacagacctactggctggtaaatgactttggcatgttcacactg
gatgttgaggagaatgagggaggcgagctcacacccttcctcattgtgacagaagccttg
gacagagagaaacaggctgaatacatcacagacatcatcgcagaggatggggggactcct
cctctactcggcgcggccacctttaaaattgtcatcacggatgtaaatgataactgcccc
caattcaccgcgacacatattaacatcagtctacatggaaatacaagcaaaggggcccat
ttggcacgcttgcacgcttttgaccccgaccttggtgttaatgcacagatcagctacgct
tacagtgacagagtgccaagggacacgaggagcttgttccatttggataaaatcacaggc
ttgattaagctagcagcaaaaatagactctgtcacggccacgttttacaaactcactgtt
ctggctaatggacctggttgtattcctgccgttgctacggtcactgtccatatcataaag
gatatcactggcccccctgctgtcataccgcggtatatcgcaccagaaaaggacggagtg
gtgacagtcaaggagtcagagccagcattctctccaattgcttttttcactgtgaagaac
attggtaagaaccaaaaggtggactgtagtttggaagggaccggtcccttcaggcttggc
ccctataagcagttgaagaacgaatatctgctggagacaacggagcccttggactatgaa
aagacacaggactatgatcttattgtggttgctaagaatactcaaggacttgtaatcaag
acctacctcaaagtgcaggtactggacgagaatgataacgcaccagagtttcagcaatct
ttggtggaaatatctattgaggaaaacaatccaccaaatacctttctgactcagctccaa
gccacagacctggacggcgaaggcagaggggaagtcaactacctcctgggaggtgacgca
cctgggatgtttgctgtggatcgcgtgacaggagtcctgactgtagccacatcgctggac
cgcgaagagaaagagaaatatcgcttcattgtgagagcagtggatcaggggacacccagg
agggagtccattgcgaccgtgctgctgacagtgcaagaccgcaatgacaacagtcccaga
ttcatcaataaggacttcactttctttgtgccggagaacttccccggttacggcgaaatt
ggggtcctctcggtgacagacgctgacgctggagaaaatggctgggtcgcactttccatc
ctcaatggcagcgacatcttcatgatagacacgggtcgaggcacactgaggactatgacg
ttgctggaccgcgagcaacaagggacgtaccatttgtggattgaggccatcgacggtgga
caacctgccctttcctgtgttgccatggtgactgtgttgttgttggatgttaatgacaac
ccacccattgtcctctttccccagtccaatcagtcttacatgctagtgctaccaaacaca
ttaccaggaacatcaattacagaggtgtatgctgtggataaggatacaggcatgaacgct
gtgattgcctacagtatcattaagaggaaaggtggtgagccggggtcatttgctattgac
ccagacactggaaatatcacattaaagagggagctcaacaaccgcggcctctacagcctg
ctggtgaaggtcagcgatcatggccagcctgaacctctttactcaatggttacagtcaac
ttttttgtaaatgaaacagtcagcaatgagagttacatccagagcctgctgaccaaagaa
gctgacatcgagatagaggagaggccttggtatgttggccagatgacagaagggcctgaa
aggtatgagctgtgtccatgtcagcctgcccttatttttctttcagtgacatgcctcggg
ctgttttgcttggttgttggtctaacagcttatatatgccgcagcaggtttaaaaagagc
cgaaagagaagatcagaggtggaaatgcctttaaaaatgaagaatgactccatgcagatt
gtaaacggaaagctcaggcagatctcagacacctaa
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