Solea senegalensis (Senegalese sole): 122772022
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Entry
122772022 CDS
T07721
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122772022 (lingo1b)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122772022 (lingo1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRR_RPS2
LRRNT
Ig_C17orf99
LRR_LRWD1
V-set
Motif
Other DBs
NCBI-GeneID:
122772022
NCBI-ProteinID:
XP_043885585
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Position
LG7:complement(10175897..10196184)
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AA seq
623 aa
AA seq
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MTVLVNIRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNGQERSVVCHR
RRLTTLPEGIPTETRLLDLSKNRLKNLGPEEFINYPQLEDLQLNENTISTIEPGAFSNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGCNIASVPTDALSHLHNLLSLRLRYLNVTVLRDYSFKRLY
RLRVLEISQMPTLDTMTPKCFFGLNLTSLSITNCNLTVIPYQAISHLRYLRFLNLSFNPI
QTVEGNQLFNLQKLQAFHLAGGRLAAIEPYSFRGLNHLRVLNVSSNNLSTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCASPEVVQGKEFKDFPDILPSDYF
ICQKSKIMDYNVQESHVDEGTTVHFTCQAEGDPLPVIMWLSPKKEYITTKTMGSRLAVTY
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEETEEASPAEEPIQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaaacattaggatggtgtctggggaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctgatgcttggcaccgtcctttctggctccacc
accggttgcccttcccgatgtgactgtaatggtcaggagcgttcagttgtgtgccatcga
aggagactgacaactcttccagagggcatccccactgaaacaaggctactagacctcagc
aagaatcgtctgaaaaatctgggacctgaggagtttattaattaccctcagctggaagac
cttcaacttaatgaaaacacaatatcaaccattgagcctggggcttttagcaaccttatg
aaccttcgcactctaggtttgcgcaacaaccagctgaagctcattcagctgggagttttc
actggcctcaccaatctcacccagctggatatcagtgagaataaaattgtcattctgctt
gactacatgttccaggagctgtacaacctgagggctctggaagttggtgacaatgaccta
gtattcatctcaccccgatcatttcatggcctcagcaacctcgaaagtctcaacattgaa
ggatgcaatatagcctcagtgccaactgatgcccttagccatctccataacctgctgtca
cttcgactgcgttatctgaacgtcaccgtcttgagggactactcatttaagaggctgtat
cggctcagagtgttggagatttctcaaatgcccaccctggataccatgactccgaaatgc
ttctttggactcaacctcacatcactgtcaattacaaactgtaatcttactgtcattcca
taccaagccattagtcacctaagatatcttcgttttttgaatctgtctttcaatcctatc
caaactgtggagggtaaccagctctttaatctgcagaagcttcaggcttttcacttggct
ggcggaagattagctgccattgagccctactctttccgaggactcaaccacctccgtgta
ctcaatgtatccagtaataacttgagcaccctggaggagtccgtctttcactcagtggga
aacctggagacgttagctttgtatgacaacccactcgcctgtgactgtcgcctgctctgg
gtctttcgtcgacggtggaggctcaacttcaacagacaacagcccatgtgtgcctcacct
gaggtggtacaaggaaaagaattcaaggacttcccagatatcctcccttcagactacttt
atctgccagaaatcaaaaattatggattataatgttcaagaaagccatgtggatgaagga
actacggttcatttcacttgccaagctgagggtgatccactaccagtcataatgtggctt
tcacccaaaaaggaatacatcactaccaaaactatggggtcaagacttgctgtgacatat
gagggcacattggaggtgcgttacgcccaaatccaggacaacggcacatatttgtgcatt
gcaagcaatgcagcaggcaacgacaccaaagctgctcacctttttgtacatagctactca
cccaattggccccaccagccaaataaaacatttgccttcatttccaaccagcctagcgac
gaaggtgcaaatgtgacccgggccacagttccatttccatttgatgtaaagacactcatc
attgcaaccaccatgggattcatctctttccttggagttgttctcttctgtctcgtaata
ttattcctctggagtagaggaaaagacaatacaaagtcaagtatagaggttgaatatgta
ccacggaaggaggaaacagaggaggccagtccagctgaggaacccatacaattcaacatg
aaaatcatgtga
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