Solea senegalensis (Senegalese sole): 122772097
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Entry
122772097 CDS
T07721
Symbol
spata13
Name
(RefSeq) uncharacterized protein spata13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122772097 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122772097 (spata13)
Membrane trafficking [BR:
ssen04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122772097 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_9
SH3_2
PH
Motif
Other DBs
NCBI-GeneID:
122772097
NCBI-ProteinID:
XP_043885730
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All DBs
Position
LG1:complement(31126615..31143231)
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AA seq
1283 aa
AA seq
DB search
MSRAEQQDGGLSTSEEHLSCFHNSKPDPLTRSRPLSDIYPFHNLGDSSAVPYLLPGCGPQ
EQPVTPGPVADENKLNSIHSSAWSNPVIGQPEGKPYSSRIMKLFSNSRKGPVPAHSPTAD
GPTSVHRNNSAPQSWSGRSGLGVVDSFKKLRSSVLQGIQSRGATNHDEDHVLSSNQEMVS
GAIVAKTDPGLENGMNHLRTAEGCSLSNGNCTEQTLAAISRTGSDIEDYDDEEENDEGDV
LTRNSRLSRSIRRAYGAGRISLLDTGRGRDAKSGTREAVDIQKPDQTSKVNIQTKNMNQD
MNMKVPNRMSKSAENLHIFKAPFRRKAPSPGSLSPQEEPQRTPMTNGTPYIQRTSSASSV
DLRGLSCNCRKSPAKTKGPMLKLVGSMTDLTVRRRQSLSPSPTSPLSPLSRLHDDYSRRV
PCFQTSERQRRPSPVRVRAMSVEHTPLVHTRQPERDTNPEQHQVLISSVSVDLPDRIETS
PGSSCHEILVVSTTVRGYKEVTECDSSPLSQKEPSQQEQIEAKLLPNKVMSEQQLREAPL
QTEVSPTTSSSTPPVSPTCLLDSPTSPTDAARASTEASSVKPRRRSGRPRPRPISDYGQL
LSRKHSIPEEVADLHVEERTENVSLHKECSDRTTCENGESPENCGMNGDVLCTRLRPVSV
IGVVDLFSPDAEEKDDLLPSPLSRPPIPSHQVPPYRAVSARFRPPTLSQSTPIGLDRVGR
RKLHRGLSDGISECVVTLDDSVSEEEEEGSFDELTDVTPYLQPGVEISVLNEWISSGHTV
YAEALWDHVTMEEQELAFKAGDVIRVLDASNKDWWWGRGADREAWFPSSFVRVRVNQEDS
SAESVESVADQEDPSPRDTHSAQHKEQMRTNVVQEIMNTERIYIKHLKDICEGYIRQCRK
HPEMFTELQLKTIFSNIEDIYAFQRRFLRDLEKQYNKDQPHLSEIGSCFLLQGEGFSIYS
EYCNTHPAACAELHRLMKSGRYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGE
LLKYTPKHHSDFIGVSKAYEAMKNVASLINERKRRLESVDAIAHWQVAILRWEGPDVLER
SSELIHSGELTRVLRQGKMQQRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDQTEVVDV
ADGRDPDLGLTLRNALRLRHASTLEFVCALCCRKAQDKQRWLEAFAKERHRVREDQEMGM
EISEEQRKQAIVNARRAKQGKIKSIGYAGSVPPHHQNLHPLHQRHVTIPTSVPQQQVFTL
AEPPRRKPYHLLYSITRNAFFRK
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacaacaggacggaggcttgtcaacaagcgaagaacatttgtcatgc
ttccataactccaagcctgacccgctgaccaggagccgaccgctcagtgatatatatcca
tttcataacctaggtgacagtagtgcagtcccgtatctgctgcctggatgtggaccccag
gagcagccggtgactccaggtcccgtcgctgacgagaacaaactgaacagcatccactcc
tctgcttggtccaaccctgttataggtcaacctgaaggaaagccttattcatcaaggatt
atgaagcttttttccaactcgaggaagggcccagtccctgctcacagtccaactgctgac
ggtcccacatcagtccacagaaacaacagtgcccctcaatcctggtcaggacgctcagga
ttgggtgtggtggactctttcaaaaagctccgctcctctgtgcttcagggtattcagagt
agaggggcaacaaaccatgatgaagatcatgtcctttcgtcaaatcaggaaatggttagt
ggcgcaattgtggcaaaaactgacccaggtctagagaatggaatgaatcatttaaggaca
gcagaaggatgcagtttgtctaatggaaattgtactgaacagacgttagcagcaataagc
cgaactggctcggacattgaggactacgatgatgaggaggaaaatgatgaaggagatgtt
ctcacacggaactcacgattatcaaggagtatcaggagggcgtacggggcaggacgcatt
tctttacttgacacggggagaggcagagatgcaaaaagtggcacgagagaagctgtggac
attcagaaaccagatcagacatccaaggtgaatattcaaacaaagaacatgaaccaagac
atgaatatgaaggtgccaaacagaatgagcaaaagcgcagaaaatcttcatatatttaag
gcaccattcagacgcaaagccccgtctccaggttctctttcgcctcaggaagagcctcag
aggactcccatgacaaatgggacaccatacatccagagaacatccagtgcctcctcagtg
gaccttcgaggcctctcctgtaattgcagaaaaagccctgcaaagactaaggggccaatg
ctgaagctagtaggcagcatgactgacctaactgtccggcgcaggcaaagtctctccccc
agccctacatctcccctgtcacccctgagccgtctccatgacgactactcccgtcgtgtg
ccttgctttcaaaccagcgaacgccagcgccggccttcgcctgtcagagtgcgtgctatg
tctgtcgaacacacaccactggttcatacgcgccaacctgagcgtgacacaaacccagag
cagcaccaggttcttatcagctctgtctctgtggatctcccagatagaatagagacttca
cctggttcttcttgtcatgagatcctggttgtatccacaacagtacgtggctataaagag
gtgacggagtgtgattcttcaccactcagccaaaaagagccgtcacaacaggagcagatt
gaggccaagttgctacccaacaaggttatgtcagagcaacaattacgagaagcacctctc
caaacagaagtgtctccaacaaccagcagcagcacaccgcccgtctccccaacatgcctc
ctcgattcacccacatcacccacagacgcggcaagggcttccactgaagcatcctctgtt
aaacccaggcgaagaagtgggcgcccgagacctcggcccatttctgactacgggcagctt
ctgtccaggaagcactccattcccgaggaagttgcagatctgcacgttgaagaaaggaca
gaaaatgtgtcgttgcataaagagtgcagtgatagaaccacctgtgagaatggagagagc
cctgaaaactgtggcatgaacggagatgtcctgtgcacgaggttgcgacccgtctcggtg
attggagttgtggatctgttttctcctgatgctgaagagaaggacgacctgcttccttct
cctctgtcacggccgcccatcccctcccaccaggttcccccctacagagcggtgtctgct
aggtttcgccccccgactctttcccagagcacccccatcggactggatcgcgttgggcga
cgaaagctgcacagagggctcagcgatggtatctctgagtgcgtggtgacacttgacgac
agtgtgagcgaggaggaggaggaaggcagctttgatgagctcactgatgtcacgccctat
ctccaaccaggggtggagatctctgtgctcaacgagtggataagctcgggccacacggtg
tatgctgaggctctctgggaccatgtgaccatggaggagcaggaactggccttcaaggct
ggagatgttatccgcgtcctggatgcctctaataaggactggtggtggggcaggggggct
gacagagaagcctggttcccctccagctttgtgagggtgcgagtgaaccaggaagactcg
agtgctgaaagtgtcgagagtgtagcagaccaggaggatccaagtcccagggacacacac
agtgctcagcacaaggagcagatgagaaccaatgtggttcaggaaatcatgaatactgaa
cgcatctacatcaaacacctcaaagacatctgtgagggttacatccgccagtgccgtaaa
cacccagagatgtttaccgagctgcagttgaagaccatcttcagcaacattgaggacatc
tacgcgtttcagaggcgatttctgagagacctggagaaacagtacaacaaagaccagccg
cacctcagcgaaataggctcttgttttcttttacagggtgagggtttctccatttactca
gagtactgtaacacccatccagcagcctgtgctgagctgcatcgcctcatgaagtcaggc
cgatacaaacacttctttgaagcctgtcggctcctccagcagatgatcgacatctccatc
gctgggtttctgctcacgcctgtccagaagatctgcaaatacccgctgcagctgggagaa
ctgctcaaatacacccccaaacaccacagtgacttcatcggagtgagcaaagcatatgag
gcgatgaagaacgtggcgagtctgataaatgagaggaagagacgtctggagagtgtcgac
gccatcgctcactggcaggtggccattctgcgctgggagggacccgatgtgctggaacga
agttcggagctgatccactctggggaactgacccgtgtcctccgacaaggcaaaatgcag
cagcgcagcttcttcctgttcgaccaccagctggtcttctgtaaaaaagacgtcctgcgc
agagacctgctccactaccgtggacggctggacatggaccagaccgaggtggtggatgtg
gccgacgggcgggacccagacctgggcctgaccctgaggaatgctctgcgcttgcgacat
gcctccacgctggagtttgtgtgcgcactgtgctgcaggaaggcccaggacaagcagagg
tggttggaagcatttgccaaggagagacacagagtcagagaagatcaggagatgggaatg
gagatcagtgaagagcagagaaaacaggccattgttaatgccagacgagccaaacagggg
aagatcaaatccattggttacgccggttctgtcccacctcaccaccaaaacctccaccca
cttcaccagcgtcacgtcaccattccgaccagcgtgcctcagcagcaggttttcacactg
gccgagcccccgagacgaaagccttatcacctgttgtacagcatcactcgcaatgccttt
ttcaggaaatga
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