Solea senegalensis (Senegalese sole): 122772132
Help
Entry
122772132 CDS
T07721
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122772132 (ddx21)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122772132 (ddx21)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122772132 (ddx21)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
Pre-60S particles
Helicases
122772132 (ddx21)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122772132 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
122772132
NCBI-ProteinID:
XP_043885772
LinkDB
All DBs
Position
LG7:complement(23244422..23253674)
Genome browser
AA seq
764 aa
AA seq
DB search
MPSKIIFDTEDQVMEETVDTVIEAKTLKIKNKEGKKLKKMQLEDQAEQEEPDCEPPAPKK
KKKKDKLAAEQMNDHTDEATDLNGNCNGIETPKKKKTKKNSEGDTEKKKKQKQATIEAET
NGHSKPNTPVQTPSQTPAQSSEESASDSEKETAETPEQKEGAFSNFRISQVTIDKLKARG
VSYLFDIQVKCFDHVYDGEDVIAQARTGTGKTFSFAIPLVEKLQGSLEPVVRGRAPKVLV
LTPTRELAIQVARDFKDVSKKLSITCFYGGTSYNPQLDAIRNGIDILVGTPGRVKDHTQN
NKLDLTKVKHVVLDEVDQMLDMGFAEQVEEILALSYKKDGETNPQTLLFSATCPPWVYDV
GKKYMRPGCKHIDLIGKKTQKAATTVEHLAIACHWSQRTAVLGDVIQVYSGSHGRTIVFC
ETKKEANELALNASIKQSAQSLHGDIPQKQRETTLKGFRNGSFEVLVATNVAARGLDIPE
VDLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGV
PTANDIIKSSSKDAVRFLDSIPVTAIEYFRASAEKLIAERGAVDALAAALAHISGATSLE
QRSLLNSDAGYTTIQLVCSQEMHNMGYAWKTVKEQLGEEYDNLIQRMTFLKGKKGVCFDV
PADKVKEIQENWTDGRRWELTVATELPELEEKQFNNRGDRGFGGGDRSGGFRGGRGRSFG
GSGGRSNGFRSGGGRGGGGGRGGGGRGYGNRGGQKRSFSQAFDY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaaaatcatctttgacaccgaagatcaagttatggaggagactgtggacact
gttatcgaggctaaaacccttaagatcaagaacaaagagggcaagaagttgaagaagatg
cagttggaggaccaggcagagcaggaggaaccagactgtgaacctccagcgccgaagaag
aaaaagaaaaaagacaagctggcagcggaacaaatgaacgaccacacagatgaggccaca
gacttgaatggaaactgtaatggtattgaaacaccaaagaagaagaagactaagaagaac
agtgagggagacacagagaagaaaaagaagcaaaagcaagcaactatagaggcagaaacc
aatggacattccaagccaaacacccctgtacagacacccagccagacaccagcacagtcc
agtgaagagtctgctagtgacagcgagaaagaaacggcggagactccagagcagaaggaa
ggggccttctccaacttcaggatctctcaggtcaccattgataaacttaaagctcgggga
gtctcttacctgtttgacattcaggtgaagtgttttgatcatgtatatgatggagaagat
gtgattgcccaagctcgaacaggaacagggaagaccttctcatttgccatccccttggtg
gagaaactccagggttcattggagcccgttgtcagagggagagctcccaaggtccttgtg
ttgactccaaccagagagttggcaatccaggttgctagggacttcaaagatgtctcaaag
aaactatccatcacctgtttctatggaggcacctcatacaacccacagctcgatgctatc
cgtaatggcattgatattttggttggaacccctggtcgcgtcaaggaccacacccagaac
aataaacttgacctgaccaaagtcaaacacgtcgttctggatgaagtggaccaaatgttg
gacatgggatttgccgaacaggttgaagaaatattggccttatcgtacaagaaagacggt
gaaacaaatccccagaccctgctgttctcagccacctgccctccctgggtctacgatgtg
ggcaagaaatacatgagaccgggatgcaaacacatcgacctgattggcaagaaaacacag
aaagctgcaacgactgtggaacatctggccatagcctgccactggtcacagcgcacagcc
gtgttgggcgacgtgatccaggtttacagcggcagccatggcagaaccattgtgttctgt
gaaacaaagaaagaagccaacgagctggccttgaatgcatcgatcaaacagagtgcacag
tccctccatggcgatattcctcagaaacagagagaaacaacactgaagggcttcaggaac
gggtcttttgaggttctggttgccaccaacgttgcagcccgtggattggacattcctgaa
gtggatctcgtcgtccagtgctctccacccaaggatgtggagtcatacatccatcgttca
ggtcgtacaggtcgagctggcaggactggagtctgcatctgtttctaccagaggaaagaa
gaggatcagctgcgctacgtagaaaacaaagcgggtatcacattcagacgagttggtgtt
cccacggccaatgacatcatcaagtcatcaagcaaagacgccgtcaggtttctggactct
attcccgtcacagctattgaatacttcagagcatcagctgagaagctgattgcagagagg
ggagcagtcgatgcactagctgcagcgctggcacatatttctggagccacaagtcttgag
cagaggtcactgctgaactctgatgctggttacacgacgatacagttggtgtgctctcag
gagatgcataacatgggctacgcttggaaaacggtcaaagagcaacttggtgaagagtat
gataacctcatccaaagaatgaccttcctcaagggcaaaaagggagtttgttttgatgtc
ccagctgacaaagtcaaagagattcaggagaactggacagatggccgccgctgggaactg
actgtggccacagaactccccgagctggaggagaagcagttcaacaaccgcggcgacaga
ggcttcggcggcggtgaccgatcaggagggttcagaggcggaagggggcgtagttttggc
gggagcggtggccgcagcaacgggttccggagtggcggtgggcgtggtggcggcggtggg
cgtggcggtggcggccgcggctatggcaacagaggaggacaaaaacgaagcttcagccaa
gcttttgattactga
DBGET
integrated database retrieval system
