Solea senegalensis (Senegalese sole): 122772188
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Entry
122772188 CDS
T07721
Symbol
tent4b
Name
(RefSeq) terminal nucleotidyltransferase 4B
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122772188 (tent4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122772188 (tent4b)
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122772188 (tent4b)
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122772188 (tent4b)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122772188 (tent4b)
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122772188 (tent4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
122772188
NCBI-ProteinID:
XP_043885876
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All DBs
Position
LG7:complement(16390600..16412887)
Genome browser
AA seq
681 aa
AA seq
DB search
MDPRIAWFQPEQRGPANNLWMQIWETTQGLGYLHVNNSYTTGSQSTSTVNGAQGAVLTGR
NGALDSNVGSGKARTQGMSTPMGDGGITEQRDFIPLETNSNHNNRVAGRGGVGGGQQEQQ
GSGVAVLWRGLTDGHPNKRKRDNKASTFGFNASLLNSGSCPDTGGYDGYTGTPWKVRNYS
EGIVGLHEEINDFYEYISPRPEEEKMRLEVVDRIKGVIYDLWPSAEVQVFGSFSTGLYLP
TSDIDLVVFGKWEMLPLWTLEEALRKRNIADENSIKVLDKATVPIIKLTDSFTEVKVDIS
FNVKSGVKAARLIKEFKEKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFL
QLHYREDVSSPNINIGVLLIEFFELYGRHFNYLKTGIRIKDGGCYVAKDEVQKNMMDGYR
PSMLYIEDPLQPDNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNDTESILGRI
IRVTQEVDEYREWIRKNWGSPSQNDLPLNRNDVTLFETQQLDECNNNVPDDDEDVVVLPL
TSHSKTSSNSSSPFPSLRSSPSSSLLSPSSTTTTSSSSDADSDGTPCKTAKQQSGRGSGV
HREKTAAVSNHRPQSHTTCTPSGSNKGGKARMSRSHQKSGHHGQQSSSSSTKNHPGNKPH
HQVNSKRRKNVRDSTQEDLCR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagaatcgcctggtttcagccagaacaacgtggacccgctaacaacctgtgg
atgcagatctgggagacgacacaggggctcggctacttgcatgtcaataacagctacacc
actggatcccagagcacgtcgacagtgaacggagcgcagggagccgtcctcaccggcaga
aacggagcacttgactccaacgtaggcagtggtaaggccaggactcaagggatgtcgacc
ccaatgggggacggaggaataacggagcagcgggactttataccactggaaaccaacagc
aaccacaacaaccgagtcgctggcaggggcggtgtcggaggggggcagcaggagcagcag
ggaagtggggtcgctgtgctatggagggggttaacggacggacatcccaacaaaaggaaa
agagacaacaaagctagcactttcggattcaatgccagtctcttgaatagtggcagctgc
ccggacacgggaggctacgacggctacacgggtacgccatggaaagtgaggaactactcg
gagggaatagttgggttacatgaggagatcaatgacttctacgagtacatctccccacga
ccggaggaggaaaaaatgagattggaggtggtggacagaatcaagggagttatctacgac
ctgtggcccagcgctgaggtccaagtgtttgggagcttcagcactggtctttaccttcct
acaagtgacattgaccttgtagttttcgggaagtgggagatgctgccattgtggacgttg
gaagaagctctgcggaaaagaaatattgcagatgagaactccattaaagttttggacaaa
gcaacggttcccatcattaaactgactgactctttcactgaggtcaaagtggacatcagc
ttcaatgtgaagagtggagttaaagccgctcggctcatcaaagagttcaaagagaaatac
cctgtgctgccttacctggtcctggtgctgaaacagttccttctgcagagggacctcaat
gaggtttttaccggtggtattggttcctacagcctttttctcatggctgtcagcttcctg
cagctgcactacagggaagatgtctccagtcccaacatcaacatcggtgtcctgctcatc
gaattctttgagctttatggtcgccacttcaactacctgaagacgggcatcaggataaaa
gatgggggttgctatgttgccaaagacgaggttcagaagaacatgatggatggttacagg
ccctccatgctctacattgaggatccgttgcagccagacaacgacgttggtcgcagttca
tatggtgccatgcaggtgaagcaggcattcgactacgcctacgtggtactcagccatgct
gtgtcacccatcgccaagtactaccccaacaatgatactgagagcatacttggcagaata
atccgggtgacacaggaagtggatgaatatagggaatggatccgaaagaactggggcagc
ccatcacagaatgatttaccactgaacaggaatgacgtcacactatttgagacccagcag
ctggatgagtgcaacaacaacgttccagacgatgatgaagatgttgtggttctaccgttg
acttcccacagcaaaacctcatcgaactcctcttctccattcccttcactgcgctcttct
ccttcctcctctctgctgtcgccgtcttcaacgacgacgacctccagctcgagcgatgcg
gactctgatggcacaccatgtaagacagccaagcagcagtcaggccggggctccggcgtc
cacagggagaagacagctgctgttagcaatcaccgaccacagagccacactacctgcact
ccatctggaagcaacaagggaggaaaggccaggatgtctcgttcccatcaaaagagtggg
caccacgggcagcagagctcctcatccagcaccaaaaatcacccgggcaacaagccacac
caccaggtcaacagcaagaggaggaaaaatgtacgggactctacacaagaggacctctgc
agatag
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integrated database retrieval system
