Solea senegalensis (Senegalese sole): 122772214
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Entry
122772214 CDS
T07721
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04217
Necroptosis
ssen04622
RIG-I-like receptor signaling pathway
ssen04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122772214 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122772214 (cylda)
04625 C-type lectin receptor signaling pathway
122772214 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssen01002
]
122772214 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122772214 (cylda)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122772214 (cylda)
Peptidases and inhibitors [BR:
ssen01002
]
Cysteine peptidases
Family C67
122772214 (cylda)
Ubiquitin system [BR:
ssen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122772214 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
S_tail_recep_bd
Motif
Other DBs
NCBI-GeneID:
122772214
NCBI-ProteinID:
XP_043885945
LinkDB
All DBs
Position
LG7:complement(16209919..16226203)
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AA seq
954 aa
AA seq
DB search
MSSVLWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVQELEEKLAELLFPITNCEERYALLCNDPRLARCYE
IDCGSKVHVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEEECGVFVALDKLELWEDDDDDVTGELEVDHVNLVEEDFPPLEINSRVLVQTRDG
PERGTIIFCDLLPGNESLGFYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDVM
PEYSMQDQRLSKHSFAPRATNSDKLSSGQSKPKSKGIGHQCGSRSKSEFYYTLNGSSVDP
PAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPSVSLSSDNKFHSLPFSLNR
KTGPIDNMSHGPLSLSVQSVMGDQHEPPSPAAPPSPRPPTPPRGQPGLEVGSLVEVKENP
PLCGVIRWVGLPPGLSEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCRPD
SRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTEHDGLDVMVGKKKGIQGHYNSCY
LDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVMKL
RRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKK
DKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKEFKMFNKIFPSLELDITDLLE
DTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPKRKTHRHGKLSVPK
ELQEGMGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFN
IPQVSPCPEVEAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtcttatggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttttacatggtggtgaaggagtgtacagtggagaagcctccccagaagaccctgaggatc
ccccgtggcagtcttggccaagcctgccaggagcgcaatagcctgggacgaacactgccc
ccctgcaaaggcaagaagagtcttcgcattctggaccagaccaatgtggtgctgagtctg
gatgagcgggatgttcaggaactggaagagaagctggctgagttactgttccccattacc
aactgtgaggagagatatgccttgctctgcaatgacccacggctagcacgctgctatgaa
attgactgtggctccaaggttcatgttcagttacgctctggggatgaacctctgcctggt
gtggtccgtttcaagggctcgttgctccctgacagggccctctctggaatatggtttgga
gtcgagctgctggaggagggccggggccagggcttcacggagggttcctaccagggccgt
caactttttcgctgcgaggaggaatgtggtgtgtttgtggccctggacaaacttgaactc
tgggaggatgacgatgatgacgtaacaggcgagcttgaggtggaccatgtcaatctagtg
gaagaggatttccctccactagagatcaactctagggttctggtgcagaccagggacgga
cctgagagaggcactataattttttgtgacttgctgccaggaaatgagagcctgggattt
tatgttggcgttgacatggacaatcctatcggggactgggatggtgtaattgacgggaag
ctgctgtgtaattttgccagtttggaacacactcgacttgtccccatctgtgacgtaatg
ccagaatattccatgcaggaccaaaggctttcgaagcacagttttgcccccagagccacc
aacagtgacaagttgtcctctggccaaagcaaaccaaagagcaaaggaataggtcatcag
tgtggcagtaggagcaagtctgaattttactatactttaaatggcagctctgttgatccc
ccagcccagtccaaatccaaaagcacatggtacattgatgaagttggggaagacccagcc
aagtcacttactgacacgcctcccgacttcaatcaatcctccccgccctccagagccccg
ccctctgtgtcgctgtccagtgacaacaagttccactctctgccctttagtctgaaccgt
aaaaccgggcccattgacaatatgagccatgggcccctctccctctccgtccagtccgtg
atgggagaccaacatgagcccccatcgcctgctgcgcctccgtcaccacgacctccaacg
cctcctcgtgggcagccaggcctggaggtgggctctctggtggaggtgaaggagaaccct
cctctgtgtggtgtcatccgttgggtgggtctgcctcctggcctgtcggagcctttagct
ggactggagctggaagaagagtgtcctggttgtactgatggcaccttcaaaggcacacgg
tacttcacctgtccacccaaaaaagccttgtttgtgaagctcaagtgctgccgacctgac
tcccgcttcccgtccttgcaccactcctccaatcccatagagaggtgcaactccatcgca
tttggaggttacctgagtgaagtagtacatgagaacacacctccccgcacagaacatgat
ggtttggatgtcatggtgggaaaaaagaaaggcatccagggccactacaactcttgctac
ctggattctaccctcttctgtcttttctccttcagctctgtcctggacaccgttctgctc
agacctagatcaaagacagatgtagagtattacagagagactcaagagctgttacgcaca
gagatagtgaacccccttcgcatacatgggtacgtgtgtgccaccaaagtgatgaagctt
aggaggatactggagaaggtagaagctgcctctgggtttacatctgaagaaaaagatcca
gaagagttccttaatattcttttccatcatatactgagggttgatccactgctcaagctg
aggtcagcaggacagaaggtccaggactgttacttttaccaaattttcatggacaaaaag
gacaaggttggagttcctacgattcagcagctcctggaatggtccttcatcaacagtgac
ctaaagtttgctgaggctccctcctgccttatcatccagatgccccgttttggcaaggaa
tttaaaatgtttaacaagattttcccttcactggagttagacatcacagatcttcttgaa
gacactccaagggagtgccgaatctgtggaggcttggctctctatgagtgtcgagactgc
tacgaggacggggacatcactgctggcaagattaaacagttctgtgaaaagtgcaatacg
caggttcacctccatccgaagagaaaaacccatcggcatggcaaactgtctgttcccaag
gagctacaagaaggtatgggtcgacagggcagttttccccgtcagaggatggagctgttt
gccgtgctctgcattgaaaccagtcactacgtggccttcgtcaagtatggcagcgcagat
tctgcctggctcttctttgacagcatggcagaccgtgatggaggacagaatggattcaac
atcccccaggtgtccccctgtccggaggttgaggcctacctgaaaatgaccccggaggag
ttacacgcactagatcccaagagcatccaaggccaggcccgacggctgctgtgtgatgcc
tacatgtgcatgtaccagagcccgaccatgagcctgtacaagtaa
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