Solea senegalensis (Senegalese sole): 122772222
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Entry
122772222 CDS
T07721
Symbol
copb1
Name
(RefSeq) coatomer subunit beta isoform X1
KO
K17301
coatomer subunit beta
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122772222 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122772222 (copb1)
Membrane trafficking [BR:
ssen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122772222 (copb1)
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122772222 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
122772222
NCBI-ProteinID:
XP_043885958
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Position
LG7:2712126..2719841
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AA seq
960 aa
AA seq
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MTAAENVCYTLINVSSDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIDLKDHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIRTVKIYRGALWILGEYCSTKEDIQSVMTEIR
RSLGEIPIVEHEIKKETGEVKAEDEVSAAPVQKLVTEMGTYVTQSALSSSRPLKKDEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVAIVEEKRRQNSFVAESMLIMVTVLHLGKSSL
PKKPITDDDVERISLCLKVLSECSPLMNDIFNKECRKSLSHMLAIRLEEEKLSQKKESEK
RNVTVQADDPISFVQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPAACTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKVGNGAIMALSGFCGFMAA
NLYARSIFGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTNV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaatgtctgttacacgctcatcaatgtttcatctgactcagagccc
ccttcagaagtcagcctcaaaacagatctagaaaagggggagatcaaggcaaagactgaa
gccctgaagaaggtcatcatcatgatcttgaatggtgagaagttgccaggattactgatg
accatcatccgcttcgtgctgccacttcaggaccacacgataaagaagctcctgctggtt
ttctgggagattgttcccaaaacaaccccagatggcaagttgcttcaggagatgatccta
gtctgtgatgcctacagaaaggacctgcagcaccccaacgagttcatccgcggctccacg
ctgcgtttcctgtgcaagttgaaggagtccgaattacttgagcctctcatgcccgcgatc
cgcgcctgtctggagcaccgtcacagctacgtgcgccgcaatgctgtcctggccatttac
accatctataggaattttgaacatctcatccccgatgctcccgagctgatccacgatttt
cttgttaatgagaaagatgccagctgtaagagaaatgctttcatgatgctgattcatgca
gatcaggatcgagctctggattacctcagcacgtgtattgaccaagtgcacacctttggg
gacattctccagctggtcattgtggagctgatatacaaagtttgtcacgctaacccctct
gaacgtgcccggttcatccgctgcatctacaacctgctgcagtcctctagtccggctgtt
aagtatgaggcggctggcactcttgttaccctctccagtgctcccacagccatcaaggct
gctgcccagtgctacattgatttgattatcaaggagagcgacaacaatgtgaagctgatt
gttcttgatcgcctgattgacctgaaggaccatcccacccatgaacgtgtactccaggac
cttgtcatggacatcctgcgtgttctcagcactcctgacttggaggtcagaaagaaaacc
ttgcagctggcactggaccttgtctcgtctcgtaatgtagaagagttggtgattgttttg
aagaaagaggtcatcaagacgaacaatgtgacagaacatgaggacactgataaatacaga
cagctgctggtgcgaactctccattcttgcagtgtccgcttccctgacatggcagccaat
gtcatacctgtgctgatggaattcctaagtgacaccaatgaggcagctgctgctgatgtg
cttgagtttgtgcgagaggctattcagaggtttgacaacttgagacccctcatcattgag
aagatgctggaggtctttcacgccatcagaaccgtcaagatctacaggggagcgctatgg
atcttgggtgaatactgcagcacaaaggaagacatccagagtgtcatgacagaaatacgt
cggtccttgggagagatcccaattgtagaacacgagataaagaaagagacgggagaggtg
aaggcagaggatgaagtgagtgcagctccagtccagaagctggtgacagagatgggcacc
tatgtgacacagagtgcactcagctcgtccagacccctgaaaaaagacgaagacagacct
ccacttcgaggcttcctgatggatggagatttctatgtggcagcttccttggcaaccact
cttaccaaagtggccttgcgctatgttgctattgttgaagagaaaaggagacaaaattcc
tttgtcgcagagtccatgctgatcatggtcaccgtgctgcacctgggcaagtcctcgctg
cccaagaagccaatcacagacgacgacgtggagcgcatctcactttgcctgaaggtcctc
tcggagtgctcgcctctcatgaatgacatattcaacaaggagtgtcgcaaatccctgtca
catatgctggcgatcagactggaggaagagaagctgtcacagaagaaggagtctgagaag
cgcaacgtaacggtccaggcagacgacccgatctccttcgtgcagctgacggccaaaaat
gaaatgacttccaaagaggaccagttccagctcagtcttctggctgctatgggcaacact
cagcgaaaggaggccgccgatcccctggcttcaaaactcaacaaggtgactcagctcaca
ggcttttcagaccccgtgtatgctgaagcctatgttcacgtcaaccagtatgacattgtg
ttggacgtgctggtggtcaaccaaaccagtgacacgctccagaactgcaccctggaactg
gccactctaggtgatctcaagttggttgagaagccttcgcctctaactctggctccacac
gactttgctaacatcaaggccaacgtcaaagtggcttctaccgagaacggcatcatattc
ggcaacattgtctacgacgtgtcgggagccgccagcgacaggaactgcgtcgtgctcagc
gacattcacattgacatcatggactacatccagccggccgcctgcaccgacgcggagttc
cgacagatgtgggcagagtttgagtgggaaaacaaggtgacagtaaacaccaatatcacc
gatctgaacgaatacctccagcacatcctcaagtccaccaacatgaagtgtctcactccc
gagaaggtcggtaacggagcgataatggctctgtctggcttctgcggcttcatggcggcc
aacctttacgcccgctctatcttcggagaagacgctctggctaacgtcagcatcgagaag
cccatccacctggggcccgacgcaccggtcaacggacacatacgcatcagagcgaaaagt
caggggatggccttgagcctcggggacaagatcaacctctcccagaaaaagacaaacgtc
tga
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