Solea senegalensis (Senegalese sole): 122772295
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Entry
122772295 CDS
T07721
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122772295 (zeb1a)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
122772295 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-Di19
zf-C2H2_15
Homeodomain
Zf-C2H2_ZNF451_C
zf-C2HC_2
HOCHOB
Motif
Other DBs
NCBI-GeneID:
122772295
NCBI-ProteinID:
XP_043886146
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All DBs
Position
LG1:complement(3605971..3660742)
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AA seq
1103 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTDFNNGLEASSDSDDEDKLHIVEEDSLQETEVADGDGTMA
KDGHDAAATVLPHNGSWNGVKEECVSEEEKEVVKDALVEEILQQGDTAIIYPEAPEDEQS
PVEPGGADENGTPDSFSQLHTCPYCSRGYKRNASLKEHIRYRHETSDSNYSCLHCSYTFT
YRSQLERHMSHHRGNRDQRHVSQSTGGTGGTRKFKCTECSKAFKYKHHLKEHLRIHSGEK
PYECSNCKKRFSHSGSYSSHISSKKCVSAAHPNGVARTSIKSPPPTTQTTPVVIAPARMI
LKEKGESKPLQEQLPVTQIKSEPVEYACKPVMAAPATSAGTNGVVNGGTAQPATATNLSQ
GVAMVVPTVGLMSPISINLNDLQNVLKVAMDGNVLRQVMGSANGVVTQGKQGIVVQQPQQ
QIISLPAFVDHDGTTKIIINYSIGPAAGTTATTQPTPLIVKNSSAITPTVTSTAVAPSPT
DTDKPTTPEVADLSIVKEEPESLLITNETEAATRTKMETVDTSYPAHLPKANSTSSCLLC
DDCPDHLEAVHLLQHRKAANGEAVDSAALDPSFAALLSDAGVTLEEPPVEDIVSLLKNYF
ASNANPSAKDLMEISESVSIPVDVVRKWFAKMNSGKKVFKSCSTQLSKTTKFNSKDTLNQ
NGEEKDSKRETSNKVSSESRSTSPSDSTSLSLNNGELIIKSEPEDPEAPDSQAEPLDLSL
PKHIAAALKAKIAPLPAKQQDQPLNLARLNDEQLGSRTIYVTAPQTGNPVNIVTAAQLPT
LLSVAGQGSMGCLSSSTKRTILIPQLTYTYATTASNASGAQTVVLNGHKEETVLESSSDM
LSTVEEQGDAPMIIRRRRMDNGVYPCDLCSKVFQKASSLIRHKYEHTGKRPHECSICNKA
FKHKHHLIEHSRLHSGEKPYKCDKCGKRFSHSGSYSQHMNHRYSYCKKEGLDLDSSSESR
LSRAGGRLKSSRGTTTPHSQLDSDERESEEEDGDDEAMCMDDIRVVQVDDGECEIYEGNF
YDEDDDEDEMMEEGEEEGSVEKMKEFACDVVEVELGEDHMEGDGENQAVAAAKEIDSVAN
TDKSMRKEGFNIEHAEEVMTDSD
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaaacaggcgaacccgaagaggagcagcgtg
acagacttcaacaatggcttggaggccagttcagactctgatgatgaggacaagctacac
attgtggaggaggacagcctgcaggagaccgaggtcgccgatggggacgggaccatggca
aaggacggccatgatgctgctgctacagtattaccacacaacggctcctggaatggagtg
aaagaggagtgtgtgtccgaagaggaaaaggaggtcgtgaaggatgcactcgtggaggag
attctccagcagggagacacagccatcatctaccctgaggcccccgaggacgagcaaagt
ccagtagagccgggaggagccgatgaaaatggcacaccggactccttctcccagttgcac
acgtgtccctactgctctcggggctacaagcgcaacgcctcgctgaaggagcacatcagg
tatcgccacgagaccagcgacagcaactacagctgcttgcactgcagctacacctttacc
taccgctcgcagctggagaggcacatgagccaccacagaggcaaccgggatcagcgtcac
gtgtcccagtcaacaggagggacaggtggaactcgcaagttcaagtgtaccgaatgttcc
aaggccttcaaatacaagcatcacctgaaggagcatctgcgcattcacagcggtgagaaa
ccgtatgaatgctcaaactgcaagaagcgattctcccactcaggctcctacagctcccac
atcagcagtaagaagtgtgtgagcgcagcacaccccaacggcgttgctcggacatcaata
aagtcccctccacccaccacccagaccacacctgtcgtaatagcccccgcccgcatgatc
cttaaagaaaagggtgagagtaaacccctccaggagcagctccccgtgacccagatcaaa
tctgaacctgtggaatacgcctgcaagcccgtgatggctgcaccagcaacgtcagctggc
accaatggcgtggtgaatggagggactgctcagcctgccacagctacaaacctgtcacag
ggcgtggctatggttgtgcccacagtgggcctgatgtcgcccatcagcatcaatctgaac
gacctgcaaaatgtgctaaaggttgcaatggacggaaatgtgctcaggcaggtgatgggt
tcagccaatggggtggtgacgcaggggaagcagggaatcgtcgtccagcaaccacagcag
cagatcatcagcctgccggccttcgtggatcacgacggcaccacgaaaatcatcataaac
tacagtatcggccctgcagccggcaccacagccacgacccagcctacaccgctcattgtc
aaaaacagttctgctataactcccactgtgacgagcactgctgtcgccccctcccccacc
gacacagacaaacccacaaccccagaggtggctgacctcagtattgttaaggaagagcca
gaatcactgctcatcacaaatgagacagaggcagccacacggacaaaaatggaaactgtt
gacacttcttacccagctcacttgccaaaagccaacagcaccagttcatgtttactatgt
gacgactgtcccgaccacctggaagcggtgcacctcctccagcatcgcaaagcagccaat
ggggaggctgttgactctgctgccctggacccgtcatttgctgctctgctaagtgacgca
ggagtgacgctggaggagccgccggtggaagacatcgtctcactccttaagaactatttt
gcctcaaacgccaaccctagtgcgaaagacctgatggaaatctcagagtctgttagtatt
cccgtggacgtggtcagaaagtggtttgccaagatgaactctgggaaaaaagtattcaaa
agctgcagtacacagctttccaaaaccacaaaattcaactcgaaagacactttgaatcag
aacggagaggaaaaggactccaaacgagaaacatccaacaaagtctcatcagaatccagg
agcacttctccttcagactctacatcactaagcctcaataatggggaactcattattaaa
agcgagccagaagacccagaggccccagactcccaggcagagcctctggacctctctctt
cctaaacacattgcagctgcattgaaagccaagattgccccacttcctgccaaacagcag
gatcagcctctgaacctggctcgtctgaatgatgagcagcttgggagtcgaacaatctac
gtcaccgcacctcagactggaaacccagtcaacatcgtcacagccgcacagctgcccacg
ttactgtccgttgccggtcagggctcgatgggttgtctcagctcctcaacgaagcgaacc
atcctcatcccgcagctcacctacacctacgccactacagccagcaacgcctctggagca
cagaccgtcgtcctcaacggccataaggaggaaacagttttggaaagcagctcggacatg
ttgtccacggtggaggagcagggcgatgcacccatgatcataaggaggcggcggatggac
aacggagtttacccctgtgacctctgctccaaggtcttccagaaggccagctccctgatc
aggcacaaatacgaacacacaggaaaacggcctcacgagtgctccatctgcaacaaggcc
ttcaaacacaaacaccacctgatcgaacactcgaggctgcactccggcgagaagccgtac
aagtgcgacaagtgcgggaagcgtttctctcactccggctcgtactcgcagcacatgaac
caccgctactcgtactgcaagaaagaagggctcgacctggactccagctccgagtcgagg
ctgtcccgggccggcgggaggctgaagtcgagcagagggaccacgaccccgcactcccaa
ctggactcagacgagagggagagcgaggaagaggacggcgacgacgaggccatgtgcatg
gacgacatccgcgtcgtccaggtggacgacggcgagtgcgagatctacgagggcaacttt
tacgacgaagacgacgacgaagacgagatgatggaagagggagaggaagagggcagcgtt
gaaaagatgaaggagtttgcgtgcgacgtggtggaggtcgagctgggggaagaccacatg
gaaggggacggggaaaaccaggcagtggcggccgcgaaggaaatagacagtgtagcaaat
acggacaaaagcatgaggaaggagggattcaacatcgagcacgcagaggaagtgatgaca
gattccgattaa
DBGET
integrated database retrieval system
