Solea senegalensis (Senegalese sole): 122772307
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Entry
122772307 CDS
T07721
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122772307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122772307
03036 Chromosome and associated proteins [BR:
ssen03036
]
122772307
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122772307
Coactivators
SAGA/TFTC/STAGA complex
122772307
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122772307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122772307
NCBI-ProteinID:
XP_043886174
LinkDB
All DBs
Position
LG7:complement(17920164..17995833)
Genome browser
AA seq
1068 aa
AA seq
DB search
MAGASDPLEDMLFSDVDEKAVSDLVGSLESELAGQSNPSGKTDENGGAGSVAPANHLLGK
TLPAPVGTTTLEQQQQGRRNKPEIHQEITSKDPNPDKAVTPHSLGCSPSFGEPSTTSAAS
VNAASHGASITTLAAPGMSTLASPAASISTTCSRGFKTSLGSGETSTEANPARKRINTPR
RTASARIKSFNGASVTTRRNSNTGVPETPASVDPSVTTPNSTSATSSINTSTFTVSNASL
PVGQSAIALDRGTPTIALHRLPRHIVASITQNGTGTSVSALVQQGARVGPTTSPGPQENH
SKPVTDTGASRTDDCQSQIGMSIQSDTVYSVINSVASTPSVVTPPPTTTTAAAPTTTTIT
QPLSSATATACVTAVSTTSVCGQSTSVTTTVSMVRPPAPSPTPAVATSAQSQPRPGLTAP
QRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALAQVQAQAQAQA
QAQNSISPRPATPTTGTSFKVTTPQSPVTSQTTRQCSLTPAKMVPSPSPTPSSPALQTSS
SSSSSSSSSCPALRPKGPVAPAIAVTAPQQTPVVMAPQTPAQAASQPVQPAQTGIAASPA
ASIVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEEFTSRL
QAELKSSPQPYLVPFLKKSLPALRLSLLNSQHSLTPQQGVKPAPGGVPPAIVTGPAVHIR
HTNSVSTTPGASVLPTGTHGHAAAMGVKTASAVGGQVRMPVVITQSVRTQGIMGKGAVIQ
AGKSPMGLAVQVSGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSDLV
GTHIRSCKDEAFLHPGLLHRRILEAAKKFGVTEVPMEAVTFISHATQSRLRTVVEKVSSV
AQHRLDSCKDDECYEQAADVRSQLRFFEQLERIEKQRKDEEEREILLKAAKSRSRQEDPE
QARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGTTPSGTEVSGSSAGSP
ASSSVPSTSSRQYTRQRITRVNLRDLIFYMEQERETAHSLLLYRALLK
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagacgtggatgaaaaagct
gtgagcgacctagtgggctcattagagtcagagctggctggccaaagcaacccatcgggt
aaaacggacgaaaacggaggcgctggctcagtggcccccgctaaccatctcttaggaaaa
acactaccagctccagtgggcaccacaacactagaacaacaacaacaaggacggcgtaat
aaacctgagatacaccaggagatcacttctaaagaccctaacccggataaagctgtcaca
cctcattctctgggctgcagcccgtcttttggcgaaccctctaccacttcggctgcctct
gtcaacgcagcatcacatggagcatccatcacaacactggctgcacctggtatgtcaact
ttggcgtctccggcagccagcatcagcaccacctgcagtcgcggcttcaagacttccctg
ggatccggtgagacgtcgacagaagccaacccagccagaaaacgcatcaacacgccgcgg
aggaccgcttcggctcggataaagagttttaacggcgcgtctgtaacgacgaggaggaac
agcaacacaggggtacccgaaacccccgcctccgtcgaccctagtgtaactacaccaaac
tctacttcagccacatcctccattaacacctctactttcaccgtgtccaacgccagcctg
cctgtaggtcagtcggctattgctctggaccggggaacccccactattgctctgcataga
ctcccacgtcacattgtagctagtataacccagaacggcaccggcaccagtgtctcagcc
ttggtccagcaaggtgcccgggtaggacccaccacctccccaggtccacaggagaaccat
agcaaacctgtcacagacactggggcttccagaacagatgattgtcagtcacaaattgga
atgtcaattcagtctgacactgtctactctgtaataaacagtgttgcctctacaccctct
gttgtcacaccaccaccaacaaccaccacagctgcagctccaaccaccacaaccataacc
cagcccctgagctctgccacagccaccgcttgtgtcacagcggtgtcaactacatctgta
tgtggtcagagtacatcagtgaccaccactgttagtatggtcagacccccagctccctct
ccaacacctgctgtggccacatcagcacagtctcaacctcgtcctggactcacagctcct
caaaggattgtagccccccagctaattgtcagaccaccacagcagcagactaccattcag
ctgcccccggggtttaccatcccaccgggaatggtgttggtgcgtacagagttgggccag
ctcgtcatggttcctcagcaggcattggctcaagttcaggctcaagctcaggctcaggct
caggcccagaacagcatttctccccgacctgccacccccaccacaggaacatccttcaaa
gtaacaacgccacagtctccagtgacctcacagaccaccaggcagtgttctttgaccccg
gccaaaatggtaccatctccctctcccactccttccagccctgccctccagacttcctcc
tcttcctcttcttcttcctcctcctcctgtcctgcgctccgcccaaagggccctgtggca
ccggccattgctgtgacggctccgcagcagacccccgtggttatggccccccagacccca
gcccaggctgcctcccagccagtgcagcctgcacagacaggcattgcggcatcccctgca
gcctctattgtgtcccaggaaatgcaggaaaatgtgaagaagtgcaagaatttcctggcc
acactaatcaagctggcgtctcacaattctccgtcccccgagacatcgaagaatgtcaag
gctctggttcaagacctgctggatgctaagattgaaccggaagagttcaccagccgactg
caggccgagctcaagtcatctccacagccttacctggtgcccttcctcaagaagagcctc
ccggccttgaggctgtctttgctgaatagtcagcactccctgaccccgcagcagggagtc
aaaccagcacccggtggtgtccctcctgccatcgtgactggtccagctgtccacatacgc
cacactaacagcgtcagcaccactccgggtgccagtgtgctacccaccgggacgcatgga
catgcagctgccatgggtgttaagacagcgagtgctgttggtggccaggtgcggatgcct
gtggtgatcacacagtctgtcagaacacaaggcataatggggaagggagctgttatccaa
gcagggaaaagccccatgggcttggctgttcaggtctctgggaatcagaaaaacaagctc
aacgaccccggaggaggctctttcagggacgatgatgacattaatgatgtggcctccatg
gctggggtgaatctgaacgaggagagtgcgagaatactcgccaccaactcagacctggtg
ggaacgcatatacgctcgtgtaaggacgaggcctttcttcatccgggattgctacaccga
cgaattctggaagcagctaagaagtttggagtcacagaggtccccatggaggcagtgacg
ttcatctcgcacgcgacgcagtcacgacttcgcactgttgtagaaaaagtgtcttccgtc
gcacagcacagactggactcttgtaaggatgatgagtgctacgagcaggctgcagacgtt
cgctctcagctccgcttcttcgagcagctggagagaatcgagaagcagaggaaggacgag
gaggagagagagatccttttgaaagctgctaaaagtcgctccaggcaagaggacccagag
caagctcgactgaaacagaaagctaaggagatgcaacaacaggaactggcgcagatgagg
cagcgagacgccaaccttacagcactggctgccattggaccccgcaaaaaacgcaaggtg
gattcaccagggaccaccccatcagggactgaggtttcaggcagctcggcaggttccccg
gccagctcctccgtcccgtcaacctcttcgcgccagtacacacggcaacgcatcactcgc
gtgaacctcagggacttaattttttacatggagcaggagagagagacggcccactccctc
ctcctttaccgtgctctgctcaagtag
DBGET
integrated database retrieval system
