Solea senegalensis (Senegalese sole): 122772391
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Entry
122772391 CDS
T07721
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122772391 (cdhr5a)
Cell adhesion molecules [BR:
ssen04515
]
Cadherins
Cadherin related
122772391 (cdhr5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122772391
NCBI-ProteinID:
XP_043886338
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Position
LG7:complement(25922424..25932495)
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AA seq
706 aa
AA seq
DB search
MELMLRSKPVSGFFGCVVVIIGYFFTVSAAQRLCSVPPGPVTVSENSTADVQLVQISSGS
DVTLKVTVNPEGLFYLRGNDLMAKKGLDYESLSSAALVVWVQCSRTGSRSVNESVEVLVE
NVNDNPPNFAQNHYVLEVNELTAINTSVGLMEATDVDSAPLFYRLESATDKFFRLENINV
PKILVKSLLDYDVVQKISLVLHVQDTFNGSASNEPFFTSVATITVNVKDVDNRPPWFQPC
LRTNLGIAKLCVSSGYRGKVNLTEKEEGPLVLEPGPVFAKDGDKNRSEQISYRILRGNEG
NIFHIDEETGNITMAKAADIIGPITLTVLASQVTNRDQFAVTQVTIEVMKRSRNPPRFEK
ERYEGFIYSNSVPESMILRDRSTNRPFRVRARDEDFASGVNPDVKYEVQYSSYVNVTSDG
FMILKRVVKTESFALQLRAVDSTTGEFGTAAVSVQVIPAMAIPSPSNIGYRPGDMALLGL
VMAALLVLCLIVIGFLISRLWKGNGSMDKLCGCLGPCLKSDRPRTGHRDSLQYTNNGFQN
EGDQSRVGVRRWNNPLPRRSTFPQPRGRVIPLERRSHHCSSCGVYTNHVPKGSPSTRRAW
RDRGDGDEYGTRSILTRQRRKEGQKTVWFKESEDSSDIEVEIIPDTVGQVLEETEEELEA
EVEMEGVVRDPAAPLREEEVQNAEPSEEEEECGRTSSDKEKEKQEG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgctgaggagcaaacctgtgagcggtttctttggatgcgtcgtcgtcatc
atcggttacttttttacagttagtgcggctcaaagactttgctcggtgcctcctggtcca
gtgacggtttctgaaaacagcacagccgacgtgcagctggtgcagatcagctctggcagt
gatgtgacgctcaaagtcacggtgaaccctgagggtctgttctacctgagaggaaacgac
ctgatggcgaagaaggggctcgattatgagtcgttgtccagtgcagctctggtggtgtgg
gtgcaatgcagcagaactggttccagatctgtgaacgagtctgttgaagtcctggttgaa
aatgtgaacgacaaccctccaaacttcgcacaaaaccactacgtgctggaggtgaacgag
ctcacagcgatcaacaccagcgtcgggctgatggaagcgacagacgtggactcagcgcct
ctgttctatcgtttagagtcggcgacggataaatttttccgtctggagaacatcaacgtg
ccaaagatccttgtaaagagcctcctggactacgacgtcgtacaaaagatctcgctggtt
ttacacgtgcaggacacgttcaacggctcggcctccaacgagccgttcttcacgtcggtg
gccacgatcacggtcaacgtgaaggacgtcgataaccggccgccgtggtttcagccgtgt
ctgaggacaaatttagggatcgccaaactgtgtgtgagcagcggctacagaggcaaggtc
aacctgacggagaaagaggaaggaccattagtgctggagcccgggccggtgttcgctaag
gacggagacaagaacaggagcgagcagatcagctacagaatactgcgaggaaacgaagga
aacattttccacattgatgaagaaacaggaaacatcaccatggcaaaagctgctgatatt
atcggcccgataacgctcactgttctggcatctcaggtgaccaacagggaccagtttgca
gtgactcaggtgaccattgaggtgatgaagaggagcaggaatcctccgcggtttgagaag
gagcgatacgaagggttcatctacagcaactccgtccctgaaagcatgatcctccgagac
cggagcacaaaccggcccttcagggtgcgagcgcgggacgaggactttgctagtggtgtg
aatccagatgtgaagtacgaggtccagtacagcagctacgtcaacgtgacctcggacggt
ttcatgatcctgaagagagttgtgaagacggagtccttcgcgctgcagctccgggcggtg
gactcaacgacgggggagtttggcacagcagccgtctctgtccaggtcataccggccatg
gccattccgtctccctccaacatcggctaccgtccaggagacatggctctcctgggtctg
gtcatggcggctctgctcgtgctctgcctcattgtgatcggctttttgatttcccgcttg
tggaagggaaatggcagcatggacaaactgtgtgggtgcctgggcccctgtctgaagtcg
gaccggccccggaccgggcacagggactcgctgcagtacaccaacaacggtttccagaac
gagggcgaccaaagccgcgtgggcgtcaggcgctggaacaaccctctcccaaggcggagc
accttcccccagccgcggggccgggtcatccccctggagaggcggagccaccactgctcc
tcctgtggcgtctacaccaaccacgtccccaaggggagcccctcaacgaggagggcctgg
agggacagaggagacggggacgagtacggcacaaggtccatcctgaccaggcagaggaga
aaggagggccagaagacagtgtggttcaaagagagcgaggactcctcagacatcgaggtg
gagataatcccggacactgtaggacaggtgttggaggagacagaggaggagctggaggcg
gaggtggagatggagggggttgtcagagacccggctgccccgctgagagaggaggaggtc
cagaacgccgagcccagtgaggaggaggaggagtgtggaagaacaagctcagataaggag
aaggagaagcaggagggctga
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