Solea senegalensis (Senegalese sole): 122772402
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Entry
122772402 CDS
T07721
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122772402 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122772402 (myo5aa)
04131 Membrane trafficking [BR:
ssen04131
]
122772402 (myo5aa)
03029 Mitochondrial biogenesis [BR:
ssen03029
]
122772402 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122772402 (myo5aa)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122772402 (myo5aa)
mRNA cycle factors
P-body specific factors
122772402 (myo5aa)
Membrane trafficking [BR:
ssen04131
]
Others
Actin-binding proteins
Myosins
122772402 (myo5aa)
Mitochondrial biogenesis [BR:
ssen03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122772402 (myo5aa)
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122772402 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
TPR_MLP1_2
DUF4407
nSTAND3
Myosin_N
DUF5382
AAA_16
AAA_22
HTH_17
Motif
Other DBs
NCBI-GeneID:
122772402
NCBI-ProteinID:
XP_043886356
LinkDB
All DBs
Position
LG7:complement(13670766..13720331)
Genome browser
AA seq
1891 aa
AA seq
DB search
MAASELFTKRARVWIPDAEEVWKSAELTKDYKNGDTSLQLLLEDGTNIEHTLDPKTKNLP
YLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLQIYG
TDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDNRYRIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKILNLSSANDFVYTRQGHSPVIEGVD
DTKELRNTRHAFTLLGINESYQMGLFQVLAAILHLGNVEIKDRDSDSSVIAPNNRHLMAF
CELVGVAYQDMSHWLCHRKLKTTSETYIKPLPRLQATNARDALSKHIYAKLFNWIVEHVN
KALITNIKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMRE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKSCSLFEK
PRMSNRAFIIQHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKFDLLVELFRDGEKATS
PTGQVPGTGGRTRLSIKPDKGREKSSKDHKKTVGCQFRNSLQMLMETLNATTPHYVRCIK
PNDFKMAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD
KKLTCRNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRCWLA
RKKYLRMRSAAITIQRFTRGYQARCLAKFMRRTQAATIIQKYQRMCVERKRYRQKQAAAL
AMQTILRAYMARQKYQMLLREHKAVIIQKRIRGWLARCWYKRCLESIVYLQCCIRRMRAR
QELKKLKIEARSVEHFKKLNKGMENKIMQLQRKIDEQHKDNRSLNERLSGLETSYTTESE
KMRGELSRLRGYEEEAKNKTNQVSSLLEELERVKKELSTTQQEKKTIEDWAQTYRSEMEK
MVSELKEQNGLLKKEKDDLNRSIQEQSQQMTVKMARAIAEETQQLETDLNEERSRYQNLL
TEHLRLEEKYDDLKEAMVLSSNKPGHRRTDSTHSSNESEYTYNSEYAEMEEGSRAAEDVT
RGIDTSLTLKLQKRLTELEQEKQSLRNELENKEDQFQRARARDNAEFKKARGAELEYESL
KRQELESENKKLRHDLADMRQSLLGNAATSTGAPGSPAYKVLLDQLNASCEELEVRKEEV
LILRSQLVSQKEAMHHKDEKETMTEPSVSVQDVSKLKDSDEIKQAYIGLKDTNRSPQFMR
KPLEVSDLLSRLRSAAPDFHKLNEDGELWLVNQGLKETIRLLEHQLQTQRRTHDSEVEVM
RGELQSVKEENSRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLELLAEDPAASREAR
VVILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGQTEGQTSPGQMVEEPIHPV
NIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHADYVN
DDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLANTCRFLHCLKQYSGDDAFMKHNTSR
QNEHCLSNFDLAEYRQVISDLAIQIYQQLIKCMENILQPMIVSAMLEHETIQGVSGVKPT
GLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELIKQVVKQQFYIIGAVTLNNL
LLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMVCGAKETLEPLIQAAQLLQVKKKTDEDA
EAICSMCQALTTAQIVKVLNLYTPVNEFEERVSVAFIRTIQTRLRDRCESPQLLMDTKVI
YPVTFPFNPSSLALETVQIPGSLNLGFLTRV
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcggagctcttcacaaagcgtgctcgggtgtggatccccgatgctgaggaa
gtgtggaagtccgctgagctcaccaaggactacaaaaatggcgacacctctctgcagctc
ttgctggaggacggaacgaacattgaacacacgctggaccctaagacgaagaacctgcct
tacctgcgaaaccctgacatcctggtgggagaaaatgacctcacagcgctcagctacctg
cacgagccggctgtgctccacaacctcaaagtccgcttcatcgactctaagctcatctac
acttactgtggaatcgttctggtggccatcaacccgtacgagacgctgcaaatctatgga
acagatatcatcaatgcctacagcggtcagaacatgggagacatggacccccatatcttt
gctgtggcagaggaggcttacaaacagatggccagggacgagaggaaccagtcaattatc
gtgagtggggagtccggagcaggaaagacggtatcagccaaatatgccatgagatacttt
gctacagtcagtggctccgccagcgaggccaacgtggaggagaaagtcttggcttccaat
cccatcatggaggccattggaaacgcaaagaccaccaggaacgacaacagcagtcgtttt
ggcaaatacattgagatcggcttcgacaaccgctaccgcatcattggtgccaacatgaga
acgtatctactggaaaagtcacgagtggtctttcaggcagatgaggagaggaattatcat
atcttctatcagctctgtgcatcatcacatctgcctgagttcaagattctgaatctgagc
agtgcaaatgacttcgtgtacacgagacaaggccacagccccgtaatcgaaggtgtggat
gacaccaaggagctccgcaacacacgccatgccttcactctgctcggtatcaatgagtcc
tatcagatggggttgtttcaagttttggctgcaattcttcatcttggaaacgtggagata
aaggacagagattcagacagcagtgtcattgctcccaacaatcgacacctgatggcgttc
tgcgagctggtgggcgtggcctatcaggacatgtcccactggctgtgccacaggaagctg
aagacgacctcggagacgtatatcaagcccctacctcgcctgcaagccaccaacgcccgc
gacgcactctccaaacacatctacgctaagctcttcaactggatcgtagaacacgtcaac
aaggctctgatcacgaacatcaaacagcactccttcattggcgtccttgacatctacggg
tttgagacatttgagatcaacagctttgagcagttctgcatcaactatgctaatgagaaa
ctccagcagcagttcaacatgcatgtgttcaagctggagcaggaggagtacatgagggag
cagattccctggactttgatagacttctatgacaatcagccctgtatcaacctcatagaa
gctaagatgggaatcctggacctgctggacgaggagtgcaaaatgccaaaaggttctgat
gattcctgggctcagaaactgtacaacacccatctgaaaagctgctccctgtttgagaag
ccgcgcatgtccaaccgcgccttcatcatccaacattttgctgacaaggtagagtaccag
tgtgacggtttcctggagaaaaacaaggacactgtgaatgaagaacagatcaatgtgctg
aaggccagcaagtttgacctcctggtggaactgtttcgagatggggagaaagcaaccagt
cccacaggtcaggttcctgggactggaggccggacccgcctcagcatcaaacctgacaag
ggtcgggagaagagcagcaaggatcacaagaagacggtcggctgccagtttcgtaactcg
ttgcaaatgctgatggagacactgaatgcaaccacccctcattacgtccgctgcatcaaa
cccaatgacttcaagatggccttctccttcgatcctaaacgtgctgtgcagcagctcaga
gcctgcggtgtcctggaaaccatccgcatctctgctgcaggcttcccatccaggtggacg
taccaagagttcttcagtcgttacagagtgctgatgaagcagaaggatgtgctttctgac
aaaaagttgacttgcagaaatgttctggagaaactcgtgcaggaccaagataaataccag
tttggtaagaccaagatcttcttcagagctggacaggttgcttatctagagaagttaagg
gcggacaagttgcgtgctgcatgcatccgcatccaaaaaaccatccgctgctggctggca
cgcaagaagtatctgcgcatgcgcagtgctgcgatcaccatccagaggttcaccagagga
taccaggcacgctgcctggccaagttcatgcgtcgcacccaggcggccaccatcatccag
aagtaccagagaatgtgtgtagagagaaaacgctacaggcagaagcaggctgctgccctg
gcgatgcagactatcctcagagcttacatggcccgacagaaataccagatgctactgcgc
gagcacaaggcggtcatcattcagaagcgtattcgtggctggttggctcgctgctggtac
aagcgctgcctcgaatccatcgtctaccttcagtgctgcatccgcaggatgagggccagg
caagagttgaagaagctaaagatcgaggctcgctcagtggagcacttcaagaagctcaac
aaaggcatggagaacaagatcatgcagctgcagagaaagatcgacgagcagcacaaggat
aatcggtcactcaatgagaggctttctggtctggagacctcctacacaacagagagtgaa
aaaatgcgcggcgagctcagccgactgcgtgggtatgaggaggaggccaagaacaaaacc
aaccaggtgtcgtcgctgctggaggagctggaacgggtgaagaaggagctgagtaccaca
cagcaggagaagaagaccatcgaggactgggcgcagacatacaggagtgaaatggaaaaa
atggtctcggagctgaaggaacagaacggcttgctgaagaaggagaaggacgacttgaac
aggtcgattcaggaacagagtcagcagatgacagtgaaaatggcgcgtgcgatagcagag
gagactcagcagctggagacggatttgaacgaggaacggtctcgctaccagaatctcttg
acggaacacctccgcctcgaggagaaatacgacgacctgaaggaggcgatggttctttcc
tcgaacaagcctggccacaggagaacggattccacccacagcagcaacgagtcagagtac
acctacaactccgagtacgctgaaatggaagaaggttcccgtgctgcagaagatgtgacg
cgaggaatagacacctcactgacgctgaagctgcagaagcgtctcacagagctcgagcaa
gagaagcagtcgctgcgcaacgaactggaaaacaaagaggatcagttccaacgggccaga
gctcgggataatgcagagtttaaaaaggctcgtggggcagagctggagtacgagtccctc
aagcgtcaggagctggagtcagagaacaagaagctgaggcatgatctggcagatatgaga
caaagccttctgggaaatgcagctacaagcactggagctccaggctcccctgcttacaag
gtgctgctggaccagctcaacgcctcctgtgaggagctggaggtccgcaaggaggaagtt
ctgatcctgcgctcccaactggtcagtcagaaggaagccatgcaccacaaggatgagaag
gagaccatgacagagccgtcggtctctgttcaggatgtgtctaaactgaaggactctgat
gaaatcaaacaagcctacataggactcaaagacaccaacagatctcctcagttcatgcgt
aagccgctggaagtcagtgatctcctgagtaggctcagatctgctgctccagacttccat
aagctgaatgaggacggagagctgtggctggttaatcagggcttaaaggagaccatcagg
ttactggaacaccagctgcagactcagcggagaactcacgatagtgaggtggaagtgatg
cgcggcgagctgcagagtgtcaaggaggaaaatagccgtcagcagcagctcttggcccaa
aacctccagctgcccccagaggctcgaatcgaagccagtctgcagcatgagatcacccgg
ctcactaacgagaacctggaactcttggccgaggacccggcagcatccagagaggctcgc
gtcgtcattttacgacggatggttgatctcatggagcagctggagaagcaggaccgaacc
atccgcaagctcaagaagcagctgaaggtttactccaagaggattggagaaatgggagcg
ggtcaaactgagggacagacatctccaggacagatggtggaagagccaatccatcctgtc
aacattccccgcagggaaaaagacttccagggaatgctggagtacaagaaggaggatgag
ctcaaactcgtcaagaacctcatcctggaactgaagccgcgtggcgtagcagtgaatctg
atcccaggtctgcccgcctacatcctcttcatgtgtctgagacatgccgactatgtcaat
gatgaccagaaggtccgcactctgctcacgtcaaccatcaacagtattaagaagatacta
aagaaacgaggagatgactttgagacggtttctttctggttggcgaacacctgtcgcttc
ctgcactgtctgaaacaatacagcggagatgacgctttcatgaagcacaacacatcgagg
caaaatgaacactgtctgtccaactttgacctggcggagtacagacaggtgatcagtgac
ctggccatccagatttatcagcagctgatcaaatgcatggagaacatcctccagcccatg
atagtctctgccatgctggaacacgagaccatccagggtgtttcgggggtgaagcccact
ggtctccgcaagcggacgtccagtatcgccgacgagggcacctacaccctggactccatc
ctgcggcagctcagcgccttccactccaccatgtgtcagcacggcactgaccccgagctc
atcaaacaagtggtgaagcagcagttctacatcatcggagccgtcaccctcaacaacctg
ctgctacgcaaggacatgtgctcctggagcaaaggcatgcagatcaggtacaacgtgagc
cagctggaggagtggctcagagacaaaggtttgatggtttgtggagccaaggagactctg
gagccgctgatccaggccgctcagctgctgcaggtgaagaaaaagacggacgaggacgct
gaggccatctgctcaatgtgccaggccctcaccacggctcagatcgtcaaagtcctgaac
ctctacactccagttaatgagtttgaggagagggtgtctgtggcattcatacgaactata
cagactcgattgcgagaccgttgtgagagtccccagttgctgatggacacaaaggtgata
tatccagtcaccttcccgttcaacccgtcctccctcgccctggaaaccgtccagatcccc
ggctcactcaacctgggctttctcacccgagtctaa
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integrated database retrieval system
