Solea senegalensis (Senegalese sole): 122772452
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Entry
122772452 CDS
T07721
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122772452
03036 Chromosome and associated proteins [BR:
ssen03036
]
122772452
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122772452
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122772452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
Cwf_Cwc_15
zf-met
LIM
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_15
DTHCT
Zf-C2H2_ZNF451_C
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
122772452
NCBI-ProteinID:
XP_043886455
LinkDB
All DBs
Position
LG7:complement(616039..622876)
Genome browser
AA seq
770 aa
AA seq
DB search
MEGEVVSMDTPQTAVLTSDGKVLSEDGDALTTITQQGEVAGNMEMMVMDALDPTLLQMKT
EVLEGGGTMTVTSGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTTTVEGLQATYV
DASAANKDSEPVICHTLPLPEGFQVVKVGANGEVETVEQEELGAAHQELHTVEEEEMEEA
VDVEPPVAQEEDPEWSKDPDFQPITAIRKGKKGKKSRLRYAEGDRDMDVSVYDFEEEQQE
GLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPH
KCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCS
MCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHA
RFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDA
VFHERYALIQHQKTHKNEKRFKCEHCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTFRQ
KQLLDMHFKRYHDPHYIPTAFACSKCNKTFTRRNTMLRHADNCTGESGGEENGTPTPKKG
RRGRKRKMQTRADDDDDDDDTGAEGDVDEEEEDEEDEEDEEEELLTEMYVEQAPPVVPIP
APVEPPVKRKRGRPPKNKPAAVAAAIIRVEDEATGEVDDIIVKKEVGGEQDDQEDDAEGA
VEEVVIGGEKSTIEMEELSQEAGSAEVVQLSEAPPNGDLTPEMILSMMDR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgtttccatggatacccctcagactgctgtcctgacctcggatgga
aaggtgctgtcagaggatggagatgccctgacaaccataactcaacagggggaggtggct
ggtaacatggagatgatggtaatggacgctcttgacccgactttactgcaaatgaagacc
gaggtgttggagggaggtggcacaatgacggttaccagtggagacgagggacagatcatc
acgctccaggtggtgaatatggaggagcaggctggtgcagcattaggccttggtcagctt
caactggttcaggtaccagtcaccacgacgactgtagaggggctccaggccacctacgtc
gacgcctcagctgctaacaaggactcagagccagtgatctgtcacactcttcccctgcct
gaaggcttccaggtggtgaaagtgggtgctaatggtgaagtggagactgtagagcaggag
gagcttggagcagcccatcaggagcttcacacagtagaagaggaggagatggaggaggca
gtagacgtagaaccacctgtggctcaggaagaagacccagagtggtccaaggacccagat
tttcagcccatcaccgctatccggaaaggaaagaaaggaaagaagagccgcctgcgctat
gcagagggcgatcgcgacatggatgtttccgtgtacgactttgaagaagagcagcaggaa
gggctgctgtcagaggttaatgctgagaaggtcgtgggcaacatgaagccaccgaagccc
accaagatcaagaaaaaaggtgtaaagaagaccttccaatgtgaactgtgcagctacacc
tgtccaagacgctccaacctggaccgacacatgaagagccacacagacgagaggccccat
aaatgtcacctgtgtggaagggccttcagaaccgtcaccctgctgagaaaccacctgaac
actcacacgggcactcggccacataaatgcacagactgtgacatggcctttgtgaccagc
ggtgagttggtgcgtcatcgtcgttacaagcacacacacgagaagcccttcaagtgctcc
atgtgtgattattgcagtgtggaggtgagcaagttgaagagacacatccgttctcatact
ggggagcgaccattccagtgcagtctttgcagttatgccagcagagacacttacaagcta
aagagacacatgaggacacattcaggtgagaagccgtatgagtgctacatctgccacgcc
cgattcacacagagcggcaccatgaagatgcacattctgcagaaacacacggagaacgtg
gcgaagttccactgcccacactgtgatactgtcatcgctcgcaagagtgacctcggtgtt
catttacgaaagcagcactcttttattgagacggggaagaaatgtcgttactgcgacgca
gtgtttcacgagcgttacgcgctcattcaacatcagaagactcacaagaatgagaaacgc
ttcaagtgtgaacactgcgactactgctgcagacaggaacgccatatgatcatgcacaag
cgtacacacacaggcgagaagccgtttgcctgcagccagtgtgagaaaacgttccggcag
aagcagcttctggacatgcacttcaaacgctaccatgaccctcactacatccccacggcc
tttgcctgcagcaagtgcaacaagacgtttacccgcaggaacacgatgctgcgtcatgct
gataactgcacaggtgaaagtggtggggaagaaaatggaactccaacgcccaaaaaaggt
cgtcgtggcaggaagaggaagatgcagaccagggctgacgatgacgacgacgacgacgac
acaggtgctgagggtgatgtggacgaggaggaagaagacgaggaggacgaggaggacgag
gaagaagagctgttgactgagatgtatgtggaacaggcgccacctgtcgtccccatccca
gcacctgtggagcctccagtcaagaggaaacgtggacgacctcccaagaacaaaccagcc
gctgtcgctgccgccatcatccgcgtcgaggatgaagccaccggagaggtcgatgacatc
atcgtaaagaaggaagtgggaggtgaacaagatgaccaggaggacgacgctgagggcgca
gtggaggaggtggtgatcggtggagagaagtccaccattgagatggaggagctgtcccag
gaagcaggaagtgcagaggtggtgcaactgtcagaggctccgcccaatggagatctgacc
cccgagatgatcctcagcatgatggaccggtga
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