Solea senegalensis (Senegalese sole): 122772478
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Entry
122772478 CDS
T07721
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122772478 (chd9)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122772478 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
122772478
NCBI-ProteinID:
XP_043886505
LinkDB
All DBs
Position
LG7:complement(19737415..19803607)
Genome browser
AA seq
3016 aa
AA seq
DB search
MDFFDDPSLFVGGLDGLDEDSFPTAPSLVDELNLSADFEPVQVESLGPGKHQGIMPTVST
QPVMPTYSHQMGHYSGIKAQNLTGQAFSGHGVTGGSLMPEQHGQYHSAAPVSHAPPSNGL
FCNSTSPMWGNQDQNGNVYHPVTHQQQHHQQQLRHRQQQQQLHNQPPNVRQHIRQEQHHA
CHQQEQQHRMRQQLQQLQSHQQQLLQCQPQQHNTQTMSLQQQQHQSFTFHQGGQSRGQQE
VHHSQQRVQHQLTGGPRLQARALPTKSYIDSQNSSMSGICLQQQQQHGNYHLTTGGQAFS
GSGLGDPNLPLPMHSSSVVHSLPMCSVSSATPYQPAQYPTYPGEPEIPRLDQQSLLSTTQ
SKPTPTTTVHLTSTVPDVSVCQFPSTGVVSRQHTRIPVSQVEECPFRSLRCSGETQGNGG
SAEMFGKSMSCYPNMTSQLSSERPQSCGVINTNGYLALGDSLLTSEAQDGDLEGLEPPDL
LPDLLPQLQAALSQEEESNGSWANSSVEMGHEQRKHPPVEYKEEKPRKNANGPVSQVRAL
SPPLKSSSSSSSSSSSSSSSSSSSSEKRTRRTHHQMETLTQDKQEKANRIISEAIAKARQ
RGEKNIPRVMSPESFPSSSSQYRSHRDREHKGNSKARSKQKMSRKACVVPCSKSKQKAKI
GKIVIKIGKKKKRKPESSEEESDDDPPPRHISKGDSKRRSNRQVKRKKYAEELEARLSDE
DVKVIVKAKKTNTAASKAPAVQLFVENPSEEDAAVVDKIMSSRIAKKEVSTGVVVEVEEF
FVKYKNYSYLHCEWATEQQLVKDKRIQQKIKRFKMKQAQRALFFADMDEEPFNPDYVEVD
RVLEVSYCEDKDSGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKPDSRR
VERPPASHWKKREQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSI
TFLEEIYRVGIKGPFLIIAPLSTIANWEREFHTWTHLNVIVYHGSVVSRQMLQQYEMHFR
DAQGRVMRGAYKFHAVITTFEMILTGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKIM
SLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSEYTFMQEFGDLKTEEQVQKLQGILKP
MMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLVNT
MMELRKCCNHPYLIKGAEEKILEDFREVYCPTAIDFHLQAMVQSAGKLVLIDKLLPKMKA
GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL
CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREM
FDRASLKLGLDKAVLQSMSGRDNSLGGSTGGGAAQQQLSKKEIEDLLRRGAYGAIMDEED
EGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKK
ADLDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGGSDSDDTKPKVRRNNDRLN
SYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTDRDVESICRALLAYCLVHYRGDDK
IKSFMWDLIAPSEDGRTKELQNHLGLSAPVPRGRKGKKMKIQSSSFDIHKAEWLRKHNPE
HMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQEVLDGVDSSEIKIWVPAPDHS
DLPALWWDAVADKCLLLGIYKHGYEKYNTIRADPTLCFLDRAGRPDEKAIAAEQRGNDFM
DGDVDDPEYKPAPALIKEDMEDDASSPGDLIVTDNAGDTVSVTEGGTAYWPSPSVLTARL
RRLITASQRYTKSRQILHIHQVQSQSQPTMVLSAPLCPLPPTLNDPLNPKMAAKIERQQR
WTRREEADFYRVVSTFGVVFDPSLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRV
CRLPPKEGDSAVDPSLNIQPITEERASRTLYRVELLRQVREQVLRHTLLYERLPLCQMSS
DLPVWWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQQNYSQTKAAQQQSRTPT
PLLHPQHQATSSALTSSPLPLVAHRDTEPCGVVPKVEPASEVEESRENPGESWSPSQAPA
TPTGLEEKPIPEVRDIERQMVAARTKPLTPNSSERKPKKASKRGRNETRRGSESNSDGSS
SSSSSRSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSDSEGEDGKKKV
PAAASVKGFDEDSVASLSTTQDETQDTHLAENGIAHNSSHPFLGGGYMLAASYWPKDRVI
INRLDSICQAVLKGKWPETRRVYEPGGAVASFYTTKLLDNANSLCEDPAASPQGSKVTKH
VAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGPQAQQQYLARLHELQSASDTGL
ADITKPQCSFQTVNPGHTSQMRLNGVLDGQPMVKKRRGRRKNVEGMDLLFMNRTRVPAVP
DQMPPGWGGIGQVGMAAASAPVYSQSPSQSSSQSSSQIPADTDSRVPVISLKDGTRLAGD
DAPRRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNS
LTGEERVQIINRRNARKIGGAFAPPLKDLSRFLQENPEYGVPPEWADVVKQSGYLPESMF
DRILTGPIVPEEVSRRGRRPKNPLAKAAAAGTATAADSALNLNPLLANGLLPGMDLSSLQ
ALQQNLQSLQSLQLTAGLIGLPSDAGNLAATNLAAMFPMMLSGMAGLPNLLGMSSMLGKP
AQEGTGGSEERIKGTASGATGETSTSKAPLNTSHLDTKGERTDSTITTSSSASSSTSSAT
APQSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVSATQQQSSNGDPIIPPTTL
LRTPPAASKSSPQETEHDREDRDEEDEALVEDDDEEESADQKENSGAEGSGKAETSSSES
GSSSSSSDDSDSSDED
NT seq
9051 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgacgatcccagcctctttgttggaggtttagatgggttggatgaggat
agttttcccacagcaccatcacttgtggatgagctaaacctcagtgctgactttgagccc
gtccaagttgagtctctgggcccagggaagcatcaaggcataatgccaacagtttctact
caaccagtcatgcccacttacagtcaccagatgggtcactactctggcattaaggcacag
aatcttacagggcaggcattttctggtcatggggtcacaggtggcagcctaatgccagag
caacatggccagtaccacagtgctgcgcctgtgagtcacgcacctccatccaatgggctg
ttctgtaacagtaccagtccaatgtggggcaaccaggaccagaatgggaatgtataccac
cccgtaactcatcaacagcaacatcaccaacaacagcttcgtcatcggcagcagcaacaa
caactgcacaaccagccacctaatgtcagacaacatatacggcaggaacaacaccatgcc
tgtcatcaacaggagcagcaacacagaatgcggcagcagctgcaacaactgcaaagtcat
cagcaacagctgttgcagtgccagccccaacaacataacacacagacgatgtccctgcag
caacagcagcatcaaagtttcacctttcatcagggaggtcagtctcggggccaacaggaa
gttcatcatagtcagcagcgggttcagcaccaactaacaggagggccaaggttacaagca
agagctcttccgaccaaatcctatatagatagtcagaactcttctatgagtgggatttgt
ttacagcaacaacagcagcatggtaactaccacttaactactggtggccaagccttctct
ggatcagggctgggagaccctaacctgcccctccccatgcattcatcatctgtggttcac
tccctgccaatgtgctctgtcagttctgccactccttatcaaccagctcagtaccccact
taccctggagaacccgaaatacccaggctggatcagcagtctttgttgtcgacaacacag
tccaagcccacccccaccaccactgtgcacctcacttccactgtgcctgatgtctccgta
tgtcagtttccatccactggagttgtcagtcggcagcacactaggatcccagttagccag
gtagaagaatgtccgttccggtcattacgttgttctggagaaacccagggaaacggtggg
tcagctgagatgtttggtaaatctatgagctgctaccccaacatgacgagccagttgtcc
tctgagcggcctcagagctgtggggtcatcaacactaatggatacctggctttgggagat
agtcttctgacatcagaggctcaggatggagacttggagggactagaacctcctgacctc
ctgcctgacctactgccccagctacaggcagctcttagccaagaggaggaatccaacggt
tcctgggccaattccagtgtggagatgggccatgagcagaggaaacatccacctgttgaa
tacaaggaagagaagcccagaaagaacgctaatggtcctgttagccaggttcgggccctc
agtcccccattgaagagcagctcatcgtcttcctcctcttcctcatcatcctcatcttcc
tcaagctcttcatctgagaaaaggacacggaggacacaccatcagatggagacattgaca
caggacaagcaggaaaaggccaataggataatatcagaggctatcgcaaaggcccggcag
cgcggggagaagaacatcccccgtgtcatgagccctgagagcttccctagttcttcctca
cagtacaggagccaccgagatcgtgaacacaaaggaaacagcaaggcacggtccaaacag
aagatgagtagaaaggcctgcgttgtaccctgctccaaatccaaacagaaggccaaaatt
gggaaaattgtcatcaagattggaaagaagaaaaagagaaagcctgagtcctcagaggag
gagtcagacgatgacccaccccctcggcacatttctaaaggcgactcgaagaggagatcg
aatagacaggtgaagagaaagaagtacgctgaagagctggaggccaggttgtcagatgag
gatgtcaaggttatcgtcaaggccaagaaaaccaacactgcagcttctaaagcgcctgct
gtccaactctttgtagagaatccctctgaagaagatgctgctgttgtcgacaaaatcatg
tcttctcgtattgctaagaaggaggtctctacgggagttgtagtcgaagtggaagagttt
tttgtaaaatacaagaactattcctacctacactgtgagtgggccacagagcaacagctg
gtaaaggacaagaggattcagcagaagatcaaacgcttcaagatgaaacaagcacagagg
gcactcttctttgcagatatggatgaggagccctttaaccctgactatgtagaagtagac
agagtgctggaggtgtcgtattgtgaggacaaagacagtggagaggaggtggtgtactac
ctggtgaagtggtgctccctgccgtacgaggacagcacctgggagctaaaggatgacgtg
gatcagagcaagattgaagagtttgagcagctgcaggcagtcaagccagactcgcgcagg
gtggagcggcccccagccagtcactggaagaagagggagcagtcgagggaatacaggaac
ggcaacagcctcagggactaccagctagaaggagtcaattggctcctcttcaactggtac
aacagacggaactgcatattagcagatgagatgggcctgggaaagaccatccagtcaatc
acattcctcgaggagatctatcgtgtgggcattaaagggccatttctcatcatcgctcca
ctctccaccattgccaactgggagcgggagttccacacttggacccacctcaatgtgatc
gtctaccacgggagcgtcgtcagcaggcagatgctgcagcagtatgagatgcatttcagg
gatgcacagggccgtgtgatgagaggtgcctacaagttccatgctgtcatcaccacattt
gagatgatcctgacaggctgccctgaactcaacgccatagactggcgctgtgttatcatc
gacgaggcccaccgcctcaagaacaagaactgcaagttgctagagggcttcaagatcatg
agcctggagcacaaggtcctgttgacaggcacacctctccagaacacagtggaggagctc
ttcagcctgctccacttcctggagcctgcgcgcttcccttcagaatataccttcatgcag
gaatttggagacctcaagactgaggagcaggtgcagaagcttcagggtatcctaaagccc
atgatgctgcgccggttgaaggaggatgtggagaagaagttggctcctaaggaggaaacc
atcattgaggttgagctcaccaatattcagaagaaatactaccgtgccattctagagaaa
aacttctctttcctggctaaaggagctggccaggcaaatatgcccaatctggtcaacact
atgatggagcttagaaaatgctgcaaccacccctacctcatcaaaggggcagaagagaaa
atcctcgaagacttcagggaagtttattgccccactgccatcgactttcacctgcaggcc
atggtgcagtctgccgggaagcttgtacttattgacaaactgttgcctaaaatgaaggct
ggaggacacaaggtgctcatcttttcccaaatggttcgctgcttggacatcttggaagac
tacctcattcagagaaggtacttgtatgagcgaatagatggacgagtccgtgggaatcta
cgacaggctgccatcgaccgcttcagcaagcccgactcggaccgctttgttttcctactg
tgtacaagagctggaggcctgggaatcaacctcacagcagcagacacctgtatcatcttt
gactctgactggaaccctcagaatgaccttcaggcccaggctcgctgccacaggattggt
cagaacaaggcggtgaaggtgtatcgtttgatcaccagaaattcatacgagcgggaaatg
tttgatcgtgccagtctcaagttgggcctggacaaagcagtgttgcagagcatgagtggc
agagacaacagcctgggaggaagcactgggggaggggcagcacagcagcagctatccaag
aaggaaattgaggatctgctgcgacgtggcgcttatggggccatcatggatgaggaggac
gaaggggccaaattctgtgaagaggacatcgaccagatcctccaacgtaggacaaagacc
attactatcgagtctgagggccgaggatctacctttgctaaggcgagttttgtggcatct
ggaaaccgcacagacatttctctggatgaccccaacttctgggacaagtgggccaagaag
gctgaccttgatatggaaatggtcaatggcagaaacagcttagtgatcgacactcctcga
gtccgaaaacagacgaggccatttagcgccaccaaggatgagctggcagagctttccgag
ggcggcagcgacagtgacgacaccaaacctaaggttcggcgaaacaatgaccgcctcaac
agctacggacgcacagagtgcttcagagttgagaagaatctgctcgtatatgggtggggt
cgttggaaggacattctcaaccatggccgttttaagaagcagctaaccgaccgggatgtg
gagtccatctgcagggctctgctggcctactgcttggtacattaccgtggagatgacaaa
atcaaaagcttcatgtgggacctgattgccccatctgaggatggacgtaccaaggagctg
cagaatcacttaggtttatctgccccagtccctcgcggtagaaagggtaagaaaatgaaa
atacagtccagctcttttgacatccacaaagctgagtggctcaggaaacacaacccagag
cacatgcttcaggatgacggctacaagaaacacctcaaacaccactgcaacaaggtactg
ctcagggtcagaatgctctactacctgaaacaagaggtgatcggaagccaggcccaggaa
gtactagacggtgtggactccagtgagataaagatttgggtgccagcacctgaccactca
gatttgccagccttgtggtgggatgccgtcgccgacaagtgtctactgctgggtatatat
aagcacggttatgaaaagtacaacaccattcgtgcagacccaaccctgtgcttcctagac
cgtgcgggccgaccggatgagaaggctatcgcagccgaacagagaggcaatgatttcatg
gatggggatgtagatgatccagaatacaagcctgctccagctctgataaaagaagacatg
gaggatgatgcctcttctcctggagacttgatagtcactgacaatgctggagatacagtg
tcagtgacagaaggtggaactgcttactggccctctccctcggtgttgacagccagactg
aggcgtttgatcaccgcctcccagcgctacactaagagtcggcaaattctccacatacac
caggttcagtctcagtcccagccaaccatggtactgtccgcaccgctttgcccgctgccc
cccacactcaacgaccccctcaaccccaaaatggctgctaagattgaacggcaacaaaga
tggactaggcgggaagaagctgacttctaccgggtggtttccacttttggtgttgttttt
gacccaagccttggtcggtttgactggaccaagttcagggccatggctcgtctgcacaag
aagactgacgagagcctgcagaaatacctgtgtgctttcaccgccatgtgccgacgggtg
tgccgcctcccacccaaagagggagactctgctgtagacccgtctctcaacatccagccc
atcacagaggagcgtgcatctcgtacattgtacagagtagagctgcttcgccaggtgagg
gaacaagtccttcgacatacgttactgtatgagcgcctgccactgtgccagatgagctct
gacttgcccgtctggtgggaagctggtactcatgaccgtgacctgcttattggtgctgcc
aagcacggcgtaagccgcacagattaccacattctgagagaccctgagctcagcttcatg
gctgcccaacaaaactacagccaaacaaaagctgcgcagcagcaatcacgcacacccacc
ccgctcctccatcctcagcaccaagccaccagctcagcattgacaagctctccactgcct
ttggtggctcacagagacactgagccctgtggggttgtgcccaaagtggaaccagcctca
gaggtagaggagagcagggagaacccgggggagagttggagcccttctcaagcaccagcc
actcccacaggtctagaagagaagcctattcctgaggtgagggacatcgagaggcagatg
gtagcagcacgaaccaaaccactcacacccaactcctcggagaggaaacccaagaaggcc
agcaagaggggccgcaacgagaccaggcgtggctcagaatctaactcggatggctcctcc
tcaagttcttcgtcacgctcctcctcttcttcgtcctcctcttcttcctcgtcacattcc
ggctccagctcctcttcctcttcttcatcttgctcctctggctcttcatcatcttcgtcc
tcttcctcatcttcttctgatgacagcgatagtgagggagaggacggtaagaagaaagtg
cctgcagcagcaagtgtgaagggctttgatgaggacagtgtggcatctctgagcacaaca
caggatgaaacacaagacactcatctggcggagaatggcatcgcccataactcctcgcat
cctttcctgggaggaggatacatgcttgctgcttcctactggccaaaggatcgtgtaatt
atcaaccgcctggacagcatctgccaggcagtgcttaagggcaagtggccagaaacacga
cgcgtttatgagcccggaggtgcagtggcctctttctacaccaccaagctgctggacaac
gccaacagcctgtgcgaggaccccgctgcctcgccacaggggtcaaaggtgaccaagcat
gttgcagaaaacaaggagttctcagtaaaactcaacgatcaggagggaggtctgaagttg
accttccagaagcagggtcttcctctgaagaggcccctggagtctgaggaaggaccccag
gcccagcagcagtacctggcccggcttcatgagctgcagagtgcttctgacacgggatta
gctgatatcaccaagccccagtgcagctttcagactgtgaatccaggtcatactagtcag
atgaggctgaacggagtgctggatggccaacccatggtgaagaagcggaggggaaggagg
aaaaacgtagagggaatggacttgctttttatgaacaggaccagagtccctgctgttccc
gatcagatgcctccaggttggggtggtattggccaggtgggcatggcagcggcctctgct
ccagtctacagccagagtcccagccagagctccagtcagagctccagtcagatccctgca
gacacagacagcagggtccctgtcatcagcctcaaagatggcacccggctcgctggggac
gatgcccccaggaggaaagatctagagcaatggttgaaagaacatcccggctttgtagca
gacacgggagcctttattcctggagtaaacaagatgcaaatgcagttccacttccaggac
ggtcggccaaagcagaagaggcatcgctgtaggaaccccaacaagattgatgtgaatagc
ctgacgggagaggaaagggtccaaattatcaacaggagaaatgcacgcaagattggtggt
gccttcgctcctcctctgaaggatctgagcaggttcctgcaggagaacccagagtacgga
gtcccacctgagtgggccgatgtggtcaaacagtcgggttacctcccagagagcatgttt
gacaggatcctgacaggacccattgttcctgaagaggtgagccgacgcggacgtagaccc
aagaatcctttggccaaggcagcagcagccggaacagccactgcagcagactctgctctc
aacctgaaccccctgctggccaatggcctccttcccggaatggatctcagcagcctgcaa
gccctccagcaaaacctccagagcttacagtccctgcagctcaccgcaggcctgataggg
ctgccgtctgacgccggcaacctggccgcaaccaacttggctgccatgtttcccatgatg
ctctctggcatggctggattgccaaacctgcttggcatgagcagcatgcttgggaagcca
gctcaggagggtacaggaggctcagaggaaaggataaagggaacggccagtggtgcaacg
ggagagacgtccacttctaaagctcctttgaacacctcacacctcgacaccaaaggagaa
aggacagacagtacgattacgacttcctcctcggcttccagctccacttcctctgctact
gccccacaaagtgcttcagctgcctctgcagcctccagtcacccactgtctcttaatccc
ttgttactctccagtatgctttacccagggatgcttctcactccaggccttaaccttcct
gtgtctgccacacagcagcagagctcaaacggtgacccaattattcctcctactactctt
cttcgtactccacccgcggcctccaagtcatcacctcaggagacagagcacgaccgagag
gaccgagacgaggaggacgaggctttggttgaagacgacgacgaagaggagtcggcagat
caaaaagagaatagtggcgctgaaggttcagggaaagccgagacatcttcatcagagtct
gggagttcttcttcatcctcggatgattcggattccagtgatgaggattga
DBGET
integrated database retrieval system
