Solea senegalensis (Senegalese sole): 122772496
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Entry
122772496 CDS
T07721
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122772496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122772496
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122772496
REST complex
122772496
Heterochromatin formation proteins
Other heterochromatin formation proteins
122772496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
APOC4
Motif
Other DBs
NCBI-GeneID:
122772496
NCBI-ProteinID:
XP_043886552
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All DBs
Position
LG7:10901533..10920759
Genome browser
AA seq
1296 aa
AA seq
DB search
MKRRVEDQESIFAPQQQHLRRPPVQAIAESFQHRALAPAPTVIEAATDTMQPSTGIQYSL
PQGYQVPTMPQSTSGHGHNTAPHVGPHAHNLSVPPQGPAVIQGHVHPPAPLNSTQGQQQF
QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDL
IMGFNTFLPPGYKIEIQTNDLVNVTTPGQIHYITPQGISVQNIPPSGAPSQPTSHHQHQT
LPQAGPHTTTTTTTTTTPPNPTPPAPNKTSKPIQSPAHTPTSQPNPSIPSYVSPRSPSIQ
SHTPVSSTPSSGPPLQTNQPVEFNHAINYVNKIKNRFQGQPEIYKSFLEILHTYQKEQRN
AKEAGGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSVMLSKAAPDRAESVR
NDHGATVKRPLPNNKQRLSQNGLPIRRPSGVGATPPLKKKPKIMGKDHSLTDVSKHSTST
ETMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWFKNFL
GYREFSHGEQSHAESLPKERATEGIALEIDYTSCKRLGSSYRALPKSYQQPKCTGRTPLC
REVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRALEAVQ
RKLSRMSAEEQLRFKLDNTMGGSSEVIHRKAIQRIYGDKAHDIIDGLKRNPAVSVPIVLK
RLKMKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIELLY
DDRQERASEETTTPPPSGPHMTLTYDDSQILEDAAALIIHHVKRQVGITKEDKYKIKQII
HHFIPDLLFARRGELSDVEEEEEEEEEEDMEINQDSPKKHNGLLGGSPSKSKLLFSNTAA
QKLRGTDDAYNLFFVNNYWYIFLRLHHTLCSRLLRIYEQAEKQIEEDNHEQEWEREVLGL
KREKNENPAIQLKMKEPMDIDVEDFYSVFLEMVRNLLDGNMEPVQYEDSLREMFTIHAYI
AFTMDKLIQSIVRQLQHLVTDDVSARVTDMYLSESANKATGGTLSTQTSRTTAEGVYQRK
AEQLMTDENCFKLTFAKSRGSVSLAMELLDTEEEISDEPAEAERWSDYVSRYLNSDSASP
ELREHLAQKPVFLPRNLRRIRKCQRGWEQLQQERMTKAPSVKSLDSNMGLKMECMFKLNS
YKMVYVCKSEDYMYRHTALTRAHQSQEWVNTRLHRRFQAWLDTWAKEHVTSDMAANSRKW
LMGDERDDLLPCTTSCCPEVLHYLNVNKYRVKYRTL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcgtgtggaggaccaggaatcaatatttgcaccccagcaacagcatttacgt
cgccccccagttcaagctattgcagagagcttccagcaccgggccctagccccggcccct
actgtgattgaggcagccacagacaccatgcagccatccactggtattcagtattccctt
ccccagggctaccaggtgcccacaatgcctcagagcacaagtggacatggacacaatact
gcacctcatgttggtccccatgcacataatctgtcagtaccgccccagggtcctgcagtg
atccaaggtcatgtccatccacctgctcccctaaattctactcaaggacagcagcagttt
cagcgactgaaggttgaagatgccttgtcctatctggatcaagtgaagctgcaatttggc
aatcagcctcaagtgtataatgattttcttgatattatgaaagagtttaagtcacagagc
attgacactcctggagtcatcaaccgtgtgtcacagctcttcaagggccacccagacctg
ataatgggctttaacacctttttgccccctggatacaagattgagattcaaacaaatgac
ctagtcaacgtgaccacaccaggtcagatccactacatcacccctcaaggtatttccgtt
cagaacatccctccaagtggagcacccagccaacccacaagccatcaccagcaccagact
ctgccgcaggctggccctcacaccaccaccaccaccactactaccactactcctcccaac
cccaccccaccagctccaaataaaaccagcaagccaattcagtctccagcccatacaccc
accagccagcccaatccatcgatcccatcctatgtctccccacgctcaccctcaattcag
tcccacactcctgtaagcagcacaccatctagtgggccacctctccagaccaaccagcct
gtggagttcaaccatgctataaactatgtcaacaagatcaagaatcgcttccagggtcag
ccggaaatctacaaatcctttctggaaatcctgcacacataccagaaggaacaaagaaat
gctaaagaggcaggaggtaactacactccagcactgactgagcaggaggtctacactcag
gtggcaaggctcttcaagaaccaggaggacctgctctcagagtttggacagttcctgccc
gatgcaaacagctcagtgatgctgagcaaggctgctccagacagggcagagtcagtgcgc
aacgatcatggtgcaactgtaaagagacctttaccaaacaacaaacaaaggttgagccag
aacggcctgccaatcagaagaccatctggtgtgggagccacgccgcctctcaagaagaaa
cccaaaataatggggaaggaccacagcttgactgatgtcagcaaacacagtaccagcact
gaaactatgttctttgagaaggtgaagaaggctcttcggagttctgaggcttatgacaac
ttccttcgatgcctgcatatcttcaatcaggaagttatttctcgtgccgagttggtccaa
ttagtcatcccatttcttggaaaattcccagaacttttcacctggtttaaaaacttcctg
ggctaccgagagtttagccatggggagcagagccatgctgagagtttacccaaggagcgt
gcaacagagggcattgccctggagattgattacacgtcctgcaagaggctgggatccagc
tatagagctctgcccaagagctaccagcagccaaagtgcacaggacggacgccactgtgc
agagaggttctgaatgacacatgggtgtcttttccatcttggtctgaggattctacattt
gtgagttctaagaagacacaatatgaggagcacatttacagatgtgaggatgaacgcttt
gagctggacgttgtgctggagaccaaccttgccacgatacgagccctggaagccgtgcag
cggaagctatcacggatgtccgctgaggagcagttgcgcttcaagctggacaacacaatg
ggtggctcctcagaggtcattcaccgtaaagcaattcagaggatatatggagacaaggcc
catgacatcattgacgggcttaagaggaacccagctgtgtccgtacccatagtcctcaaa
agattgaaaatgaaggaggaggagtggagagaagcccagagaggcttcaacaaaatctgg
cgggagcagaatgaaaagtattacctgaagtctctggaccatcaaggcatcaactttaag
caaaatgacactaaagtgctgcgctcaaagaccttgctcaacgaaattgagctgctatat
gatgatcgccaggagcgagcatccgaggaaactaccacacctccaccgagcggcccacac
atgaccctgacctatgatgacagccagattctggaagatgcggctgccctcattattcac
cacgttaaaagacaggtgggcatcacaaaagaagacaagtacaaaatcaagcagatcatt
caccacttcatccctgacctgctgtttgcgcggcgaggtgagctctccgatgttgaggag
gaggaagaagaggaggaggaagaggacatggagataaatcaagatagccccaagaagcac
aatggcttgttaggtggcagcccatcaaagtcaaagctcctcttcagcaacacagcagcg
cagaagctacggggaacagacgatgcctataacttgttctttgtgaacaactactggtac
atcttcttacgtctccaccacactctctgctctcgtctgctgcgaatctacgagcaagcc
gaaaagcagattgaggaggacaaccatgagcaagagtgggaaagagaagtgttgggactc
aaaagggagaaaaatgaaaatccagcaattcaactgaaaatgaaagagccgatggatatt
gatgtggaagacttttactctgtgtttctggaaatggtgcgcaaccttttggatggaaac
atggagccagttcaatacgaagactctctgagggaaatgtttaccatccatgcctacatt
gcctttaccatggataaactcatccagagcattgtcagacagctgcagcaccttgtcact
gatgatgtttctgcacgcgtaacggacatgtacctgagtgaaagtgccaataaagcaacg
gggggcacactgtccacacagacatcaaggaccacagctgagggggtctaccagcgcaag
gcagaacaactcatgacagacgagaactgcttcaagttgacgtttgcaaagagccgggga
tctgtcagtttggccatggagctgctggacacagaagaggagatctctgatgagccggca
gaggcagagaggtggtcagactacgtgagcagatacctgaactcagattctgcatcccca
gagctgcgtgaacatttggcccagaagccggtgttcctccccaggaatttaaggcgaata
agaaagtgccagagaggatgggagcaactgcagcaggagcgaatgactaaggctccctcg
gtcaagtcgctggacagtaacatggggctgaagatggagtgcatgttcaagctcaactcc
tacaagatggtctatgtgtgcaagtcggaggactacatgtacaggcacacagcactcaca
cgggcacaccagtcccaagaatgggtgaacacacgtctgcacagacgctttcaggcgtgg
ctggacacttgggccaaagagcatgtgaccagtgacatggctgccaacagccgcaagtgg
ctgatgggagacgaacgagacgacctgttgccctgcaccacctcctgctgcccagaggtc
ctacattatctcaatgtgaacaagtaccgggtgaagtacagaacattgtag
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