Solea senegalensis (Senegalese sole): 122772592
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Entry
122772592 CDS
T07721
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122772592
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122772592
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
122772592
NCBI-ProteinID:
XP_043886706
LinkDB
All DBs
Position
LG7:26919257..26936012
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AA seq
1548 aa
AA seq
DB search
MTMDSRGRRVSNGSFKRSSVKRSASSGSQKVHRVWIERTFVKRDCVHFIPSKDTSRCSCG
QLLVQHASISPVVKDEGGGALLATPAERWTPLKHTHTSPTDAYGVIEFQGGGHVNKAMYI
RVSYDSRPDSLLHMMVKDWQLELPTLLISVHGGLQNFDLPPKLKQVFGKGLIKAAVTTGA
WIFTGGVSTGVIRHVGDALKDHSSKSRGKVCAIGIAPWGIIENREDLIGRDVIRPYQTMS
NPLSKLSVLNSSHSHFILSDNGTSGKYGAEVRLRRQLEKHIALQKINTRLGQGVPVVCLI
LEGGPNVISIVMESLKEEPPVPVVVCDGSGRASDIISFAHRYCEEDGSVSDGVKDQLLVT
VQKTFNYSRSQAQQIFLMVMECMKKKALITVFRMGSEGQQDIEMSILTALLKGTNASASD
QLSLALAWNRVDIAQSQIFVYGHHRPPVSVLPTDRPKSPSSRWTAVAAAAAGGKGKVRGK
KGKAGKTKPEPPEETDPRKLELLSWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHHFLT
IPRLEELYNTKLGPANTLHFVVRDVKKGNLPPDYQITLIDIGLVLELLMGGAYRCNYTRK
SFRTLYNNLYGLKRPKALKLLGMEDDEPRPKGKGKKSKKKEEEVDVDVDDPELSRFQYPF
HELMVWAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHESSQSELVDDIYQDLENN
SKEFGQLAYELLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQML
LTDMWMGCLRMGKSNSLKVILGIVFPPAILLMDFRLGDETLYHSSKENENNKSKDDDNKS
SKDSVSNVDATSKKGDEEENQKKPRRRIPIRRTIYEFYSAPFTKFWFNTISYLVYLMLYN
YIILVKMERWPSLQEWIVISYIITLGLEKVRQILMSEPGKLKQKINVWLEDYWNITDLAA
ISVFLLGLLLRLQSEPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDM
LYFVVIMLVVLMSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDRKTRVH
IYAMEINPPCGENMYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFF
EVKSISNQVWKFQRYQLIMTFHERPILPPPLIIVPHVCIVLKKLCCQWTRGHEDEHGERR
LQLVLNTDELKNLHEFEEQCVEEYFREKDDEKLSSNNERIRVTSERVENMSMRLEEVNER
EHSMKACLQTVDLRLSQLEDVSGRMMAAVEALVGVDRGELRPRSRSSSVCEPGALLRHGS
FTSTDGYCLYHEDQDQDQDHRVQLSPDTRGGAGQEAGLKCDVKEFGWSLDVRQERTQSLS
ILISPCDLSPAHSRPASPHCDLTNTEAEKQQEEAESFPLLISCPASNRKSAGSSVLSPTH
PDQEKTPRMEAEKEGGAKAKQEVEEARSCDGEKEVETLLDSNHSNIKEGEELQEVLLMEE
DNRKYQRQPEEDEDEVQQGDTTSVLQHHLVGGATMVQDQDQRPLVLKD
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggacagcagaggcaggagagtgtcgaacggatccttcaaacgctcgtccgtt
aaacgcagcgcgtcctctggatcacagaaggtccacagagtctggatcgagaggacattt
gtgaagagagactgtgtccatttcattcccagcaaagacaccagcaggtgtagttgtggt
cagctcctggtccaacacgcctccatctctccagtggtcaaagatgaagggggcggagct
ctactggccacgcctgcagagaggtggacgcccctcaaacacacccacacttcacccact
gacgcctacggagtcatagagttccagggtggaggacatgtcaacaaggccatgtacatc
cgggtctcctatgactcgaggccggactccctgctgcacatgatggtgaaggactggcag
ctggagctgcccacgctcctcatctctgtccacggaggcctccagaactttgacctaccg
cccaaactcaagcaggtgtttggaaaaggactcatcaaagccgctgtcaccacgggagcc
tggatcttcacaggtggagtcagcacaggagtgatccgacatgtcggagacgctctgaag
gatcattcatcaaagtctagagggaaagtgtgcgccatcggcatcgcaccgtgggggatc
atcgagaacagggaagacctgatcggcagagacgtgatcagaccctaccagactatgtct
aatccactcagtaagctgtctgtgctgaacagtagccactcccacttcatcctgtctgac
aacggcaccagcgggaagtatggcgctgaggtccgcctccgccgccagctggagaaacac
atcgctctgcagaagattaacacacgtctgggtcagggtgtccctgttgtgtgtctgatc
ctggagggaggtcctaacgtgatctccattgtcatggagagtctgaaggaggagcctccg
gtccccgtcgtggtctgtgatggcagcggtcgagcctctgacatcatttcctttgctcac
agatactgtgaggaggacgggtcggtgagtgacggggtcaaagatcagctgcttgtcacc
gtccagaaaacgttcaactacagccgcagtcaggcgcagcagatcttcctcatggtgatg
gagtgcatgaagaagaaagccctgatcacagtcttcaggatgggatcagaaggacaacag
gacatagaaatgtccatcctcactgctctgctcaaaggtactaatgcctcagcgtcagat
cagctgagtttggctctggcctggaacagagtggacatcgctcagagtcagatctttgtg
tatggacaccacagacctcctgtctctgtcttacccactgaccgtcctaaaagtccatca
tcacggtggacagcagtcgcagcagcagcagcaggaggcaaaggaaaagtcagagggaag
aaaggaaaagcaggaaaaactaaaccagagccaccggaggagacggatccacgaaaactg
gagctgctcagctgggtgaactccctggagcaggccatgatggacgctctggttctggac
agagtggactttgtgaagctgttgattgagaacggggtgaacatccatcacttcctgacc
attcctcgtctggaggagctatacaacaccaagctgggaccggccaacacgttgcacttt
gtggtcagagacgtgaagaaggggaacctccctccagattaccagatcacactgattgac
attggcctggtcctggagctcctgatgggcggagcttatcgctgtaactacaccaggaaa
agcttcaggacgttgtacaacaacctgtatggcctgaagagacccaaagctctgaaactt
ctggggatggaggacgatgaacctcgtccaaagggaaaaggaaagaagagcaagaagaag
gaagaagaggtggacgtggatgtggacgaccctgagctcagcaggtttcagtaccctttc
catgagctgatggtgtgggcggtgctgatgaaacgccagaagatggcgttgttcctgtgg
cagcggggggaggaagccatggccaaagcactggtggcgtgtaaactgtacaaggccatg
gcccacgagtcgtctcagagcgagctggtggacgacatctaccaggacctggagaacaac
tccaaggagtttggacagctggcctacgagctgctggatcagtcgtacaaacatgacgag
caggtcgccatgaagctgctgacctacgagctgaagaactggagtaactccacatgtctg
aaactggccgtcgctgccaaacaccgagacttcatcgctcacacctgtagtcagatgctg
ctcaccgacatgtggatgggctgtttgaggatgggcaagagcaacagcctcaaggtgatt
ctaggcatcgtcttccctcctgccatcctcctcatggactttcgtctgggagatgaaact
ttgtatcattcgtccaaagagaatgaaaacaacaaaagcaaagacgacgacaacaaatcc
agcaaggattctgtgtcaaacgtcgacgcaacgtcaaagaaaggagacgaagaagaaaac
cagaagaaacctcgtagaaggattcccatcaggaggaccatctacgagttctacagcgcc
cccttcactaagttctggttcaacacgatctcgtacctggtgtatctgatgttgtataac
tacatcatcctggtgaagatggagcgatggccgtctctgcaggagtggattgtcatctct
tacatcatcactctgggtctggagaaagtccgacagatcctgatgtcggagccggggaag
ctgaagcagaagattaacgtgtggttggaggattactggaacatcactgacctggcggcc
atctccgtcttcctgctgggtttgctgctgcggctgcagagcgagccgtacatgggctat
ggacgcgtcatctactgtgtggacatcatattctggtacatacgcgtcctcgacatcttt
ggcgtcaacaagtacctgggaccgtacgtcatgatgatcgggaagatgatgattgacatg
ttgtactttgtggtcatcatgctcgtggtgctgatgagcttcggcgtggctcgtcaggcc
atcctccacccggacgaggagccaacatggcggctggcgagaaacatcttctacatgccg
tactggatgatctacggagaggtgtttgcagactccatagaccgtaagactagagttcat
atttatgccatggaaattaatcccccgtgtggcgagaacatgtatgacgaggacgggaag
aaactccctccctgtattccaggggcgtggcttacacctgccatcatggcctgttacctg
ctggtggctaacatcctgctggtcaacctgctcatcgctgtcttcaataacacgttcttc
gaggtgaagtccatctctaaccaggtgtggaagttccagcgttatcagctgatcatgacg
ttccacgagcgtccgattctgccaccgccactcatcatcgtcccgcacgtctgcatcgtc
ctcaagaagctctgctgtcagtggacacgaggacatgaggacgagcacggagagaggaga
ctgcagctggtgttgaacactgacgagctgaagaatctccatgagtttgaagaacagtgt
gtggaggaatatttcagagagaaagacgacgagaaactgtcttcaaacaacgaacgcatc
agagtcacatcagagagggtggagaacatgtccatgcgtctggaggaagtgaatgagcgt
gaacactcgatgaaggcgtgtcttcagacagtggacctgcgtctgtctcagttagaggac
gtctctggacggatgatggcggctgtggaggcgttggtgggcgtggaccgcggcgagctg
cgtcctcgctccagatcctcgtccgtctgtgaacccggcgctctgctgcgtcacggcagc
ttcaccagcactgacggctactgtctgtaccacgaggaccaggaccaggaccaggaccac
agggtccagctgagtccagacacaaggggaggagcaggtcaagaggcagggcttaaatgt
gacgtgaaggagtttgggtggagtctggatgtgagacaggagaggacacaatctctgtcc
atcctcatctccccatgtgacctcagccccgcccactcccgtcctgcctcacctcactgt
gacctcacaaacactgaggcggagaaacagcaggaggaggcggagtccttccctctgctc
atcagctgccccgcctccaacaggaagtcagctggcagcagtgtcttaagccccacccac
ccagaccaagaaaagacacccagaatggaagcagagaaagagggaggagccaaagccaaa
caggaagtggaagaggccaggtcatgtgatggggagaaggaggtggagacattgttggac
agtaaccatagtaacataaaggagggggaggagcttcaggaagtgctgttgatggaggag
gacaacaggaagtatcaacgtcaacctgaggaagacgaggacgaagtacaacaaggagac
acaacatctgtcctgcagcatcatctggtaggcggggcaaccatggtccaggaccaggat
cagagacctctggtcctgaaggactga
DBGET
integrated database retrieval system
