Solea senegalensis (Senegalese sole): 122772661
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Entry
122772661 CDS
T07721
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122772661 (mex3b)
04121 Ubiquitin system [BR:
ssen04121
]
122772661 (mex3b)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122772661 (mex3b)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122772661 (mex3b)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122772661 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
KH_2
zf-C3HC4_2
KH_DEAH11_2nd
Prok-RING_4
zf-RING_UBOX
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
122772661
NCBI-ProteinID:
XP_043886794
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All DBs
Position
LG7:26095957..26101659
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AA seq
538 aa
AA seq
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MPSSLFADSNVQGDALDEQRALQIALDQLSLLGLDNDQDPLFDNNQEPRKKSVNMTECVP
VPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIISAA
EHFSMIRASRNKNTSLNGSGTPVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQ
QTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIELQDENDFHANGTDV
GFDLHGHPTLWSKASAGMNLTSARKPFSNYRNDSSSSLGSASTDSYFGNNSSRMADYSPP
SPALSYTTTTNNNGNNNNNNINVNTNGNGFVYGSDVISPDCTDMTFDSSPGFDTTQAPPG
FLWSQCDSRMTPSSNGGSSPTSTSAMFPTNTSNNANGVAVNQRRVNGCTPQPRLSPPLHG
HTGGTAEHPLARRVRSDPGGGPLSFPGYSSTIASLPGVPCDSSNSSSSSSSSSSTSSGTS
RKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICERSEPKCPVCHAGVTQAIRIFS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgttcgccgacagcaacgtccagggagacgcactggacgagcagaga
gcgctgcagatcgccctggaccagctctcgctgctcggcctggacaacgaccaagacccg
ctcttcgacaacaaccaggagccccggaagaagagcgtcaacatgaccgaatgcgtcccg
gttcccagctccgagcatgtggcggagattgtgggcagacaaggttgcaagatcaaagcg
ctccgggcgaagacaaacacctacatcaagaccccggttcgaggcgaggagcctgttttt
gtggtgacgggacggcgggaggacgtggccatggcgaggagggagatcatctccgctgcc
gagcacttctccatgatccgagcctccaggaacaaaaacaccagcctgaacggaagcggc
accccagtccccggacccccgaacctgcccggacagaccaccatccaggtgcgggtgcct
taccgtgtggtggggctggttgtgggccccaagggggccaccatcaaacgtatccagcag
caaacccacacctacatcgtgacgcccagccgagacaaggagccggtgtttgaggtgacg
gggatgcccgagaatgtagaccgagcacgggaggagattgaagcccacatcgccatgagg
acgggcggcctcattgagctccaagatgaaaatgacttccacgccaacggtactgatgtg
ggttttgacctgcatggtcaccccaccctgtggtccaaggccagcgccgggatgaacctc
acctcggctcgcaagcccttctccaactaccgcaacgactcgtcctcctccctgggcagc
gcctccacagactcctactttggcaacaacagctcccgcatggcggactacagccccccc
agccccgcactcagctacaccaccaccaccaacaacaacggcaacaacaacaacaacaac
atcaacgtcaacaccaacggcaacggcttcgtttacgggagtgacgtcatctcgcccgac
tgcactgacatgacttttgactcctcgccggggttcgacacaacacaagccccgcctggt
ttcctgtggtctcagtgtgacagtcgcatgacgccctcctccaacggaggcagctccccc
acctccacctcagccatgttccccaccaacacctccaacaatgcaaacggggtagcggtg
aatcagagaagggttaatggatgtaccccgcagcccagactctcacctccactccacggc
cacaccggaggcaccgctgagcacccgctcgcacggagggtgcgcagcgatcccggcggc
ggtccgctcagtttccccggttactccagcactatcgcctccctgcccggagttccgtgc
gactcctccaactcgtcgtcctcctcctcctcgtcctcctccacctcatccggcacgagc
cggaagggcagccgcgactgctcggtgtgcttcgagagcgaggtcatcgcagctctggtc
ccctgtggacacaacctgttctgtatggaatgcgccaatcgcatctgcgagaggagcgag
cccaaatgccccgtctgccacgccggcgtcactcaggctatacgtatattttcataa
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