Solea senegalensis (Senegalese sole): 122772698
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Entry
122772698 CDS
T07721
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04137
Mitophagy - animal
ssen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122772698 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122772698 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122772698 (amfra)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
122772698 (amfra)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122772698 (amfra)
Multi subunit type E3
ERAD complex
122772698 (amfra)
LMBR1L-GP78-UBAC2 complex
122772698 (amfra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_Vps41
zf_RING_Vps8
SVIP
RING_Ste5
FANCL_C
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
122772698
NCBI-ProteinID:
XP_043886844
LinkDB
All DBs
Position
LG7:complement(9817605..9825797)
Genome browser
AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTILSVALLAGSIISAYNTVTDPGFGPLEPDETPAPHEVDLKYL
NNDVSNTELATTVLWYLATDSLFVWVLVNTFCCSLMLIAKVIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
SSHVRVLCLLVCLLLKCCALAVVCALLGASHGMHTLSFMGAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYSDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVINNMEARFAIATLEELAANDDDCAICWDTMTTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDGVQANGQQQARGLEENIGPVGAAPDARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHSTNILGIAQANNSQLMAMAHQVQEMFPQVPSYLVMQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERGSIQMSSASGDQAGPSGEAEQNVSELDNL
EARGGRFSKSAEERQKMLKQRKEELLQQARRRYLNKGPEDQDEELPILEEDAVPESDSTV
LRRRTMAAAAERRIQNQQDTLP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctttttctggagaggtttccttggcccagcctgcagacctacacaatactg
agtgtggctttgcttgctgggagcatcattagtgcctacaacactgtgactgatccaggc
tttgggcccctggaaccagacgaaacaccagctccccatgaagtggaccttaaatatcta
aataatgatgttagtaacacagaattggcaactactgttctgtggtatcttgccactgac
agtctctttgtgtgggtgttagtgaacacattttgctgctctttgatgttaattgcaaaa
gtgattcagtatgtggtgtttggcccacttagagtcagtgagaagcagcacctgaaagat
aaattctggaatttcatcttctacaagttcatcttcatctttggtgtattgaatgtgcag
acagtggaggaggtggtcatgtggtgtttgtggttctctgccctggtctttctacatctc
atggttcaactctgcaaagacagatttgaatatctgtcattctccccctccactcccatg
agcagccatgtgcgagtgctctgtctgctggtttgccttctgttgaagtgctgtgccctg
gctgtggtctgtgctctgctgggagcttcccatggcatgcacacactctcctttatggga
gcagagtgtctgctggtaactgtacgcactgggcatgtcattatgcggtactccattcat
ctgtgggatctaaaccatccagggacttgggagagtaaggggacatatgtctactactct
gacttcatcatggagctggctatgttgtttttggacctcatgcaccatatccatatgctg
ctttttggtaatatctggctgtccatggcaagcttggttatcttcatgcagctacggtat
ctcttccatgaagtccagcgccgcattcgtcgacacaagaattaccttcgcgtcatcaac
aacatggaggccaggtttgctattgctactctggaggagctggcagcaaatgatgacgat
tgtgccatctgctgggataccatgacgacagcacggaaactaccctgtggccatctcttc
cacaactcctgtttgcgttcatggcttgagcaggatacctcatgtccaacatgtaggaca
tctctgaacattaatggggatggagttcaggcaaatggtcagcagcaggccagagggttg
gaagaaaacattggcccagtaggagctgctccagatgctagaccacatattaatcaacac
aatcatttcttccactttgatggttctcgcattgccagctggctacccagtttctcagtg
gaagtaatgcacagtacaaatattctgggcattgctcaggctaacaactcccagctcatg
gccatggcccatcaggtccaggagatgtttcctcaggtaccgtcttacctggtaatgcag
gacctgcagctgactcgctctgtggaagtcaccacagacaacatactggagggacgcatc
caggtgcctttcccgacacaggcaatagaacgtggttctatacagatgagctctgcatca
ggtgatcaggcaggacctagtggagaagctgagcaaaatgtcagtgagctagacaacttg
gaggccaggggaggtcgcttctctaagtcagctgaggaaaggcagaagatgcttaagcag
agaaaagaagagttgctacagcaagcccgcaggagatacttaaacaaaggtccggaggac
caggatgaggaattgcctatactggaggaggacgctgtcccagaatcggactcaactgtg
ctcagacgtagaaccatggcagcagctgcagagagacgcatacaaaatcagcaagacact
ttaccctaa
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