Solea senegalensis (Senegalese sole): 122772701
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Entry
122772701 CDS
T07721
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122772701 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122772701 (efl1)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
Pre-60S particles
GTPases
122772701 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
ARM_LRRK2
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
122772701
NCBI-ProteinID:
XP_043886846
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All DBs
Position
LG7:26025347..26075281
Genome browser
AA seq
1116 aa
AA seq
DB search
MGHSSLEKIIALQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQVRGITMKSSAISLHYANGGQEYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVVIDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLIMELKLSSQEAYTHLQKILEQVNAVTGSL
FTSKVLEERAEKNKEEEEKEGEAAPDGDQVYDWSAGLEEADDSHLYFSPDQGNVVFASAI
DGWGFSIQQFVHIYSQRMGIKAEVLLKTLWGDFYLNAKAKKIMKGAQAKGKKPLFVQLVL
DNIWSLYDAVVTRRDKEKVEKVMTSLGVKVMARDSRHSDPKVLLSAICSQWLPVSRAVLS
MVCEKLPSPLDMAAERVEKLMSVGARRFDSLPEKTQELKKAFLQCSSEENAPVIIFVSKM
FAVDVKALPQNRQRPLTQEEISQRRELARQRHAEKLAADQMAATEGNKDHGQPAGLGTAK
MESLTLKESKPEEEEEQRETFVAFARVYSGVVKKGQRVFVLGPKYDPAQGLSTLPENCTA
SDCATEVPYLSRCSMESIYLLMGRELEELEEVPAGNVLGLGGLEDFVLKSATLSTSAACP
SFAPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGEV
HLQRCLDDLRERFAKIKIAASEPIIPFRETVVRPPKVDMVNEELGRQQKVAIIHQVKEEA
SQSRLSDNLHVDPNGLVTLTTPNRLATVGVRAIPLPQEVTSLLERSSELIRTLEQMNLSL
REGKNLDISVGTMDAIAGLKAQLENLLQGRRWRSAVERIWAFGPRRYGPNILLNSVEGYQ
RPSVWQCLNRGGEVGEAGAPAAGLRDFDSSIISGFQLATLSGPMCEEPLMGVCFSIERWD
IQSSAPSQNQDSPLDISNEGLAEVHEASPAAAAGLNQARRRADAALADCYGPVSGQLIAA
TKDACRHAFQAQPQRLMAAMYTCEIMATAEVLGRVYGVLGKREGRVLNEEMKEGTEMFII
KAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDPCWVPTTEEEYLHFGEKADSA
NQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgggccacagcagcctggagaagatcattgcgctgcagagaaaccccgcaaacatcaga
aacctgtgcattctggcacatgtcgaccatggcaaaactaccctggctgactgtttagtg
gcaagtaatggcatcatatccagtcgactggctggaaagctgcggtatctggacagcaga
gaggacgaacaggtcagaggaatcaccatgaagtccagtgccatctctctgcactacgca
aacggaggtcaggagtatttattaaatctgatcgactctcccggtcacgtggacttctcc
tccgaggtctccactgccgtcaggttgtgtgacggtgccattgtcgtcatagatgctgtg
gagggagtgtgtccacagacccaggttgtgttgcgtcaggcgtggctggaaaacatccgg
ccagttctcgtcatcaataagatcgacagactcatcatggagctgaagctgtcttcacag
gaggcctacactcacctgcagaagattctggaacaggtgaacgcagtgacgggaagtttg
ttcacatctaaagttctcgaggagcgagcggagaaaaacaaggaggaggaggagaaagag
ggtgaggcggcgccagacggtgaccaggtttacgactggagcgctggactggaggaggcc
gacgactcccacctctacttttcacctgaccaggggaacgtggtgtttgccagcgccatc
gacggatggggcttcagtatccagcagtttgtccacatctacagtcagaggatgggtatt
aaagccgaggtgctgctcaaaaccctgtggggagatttctacctcaacgccaaagccaaa
aagatcatgaaaggagctcaggccaaaggaaagaagccactgtttgtgcagcttgtgctg
gataatatctggagtttatatgacgccgttgttacgaggagagacaaggagaaggtggag
aaggtgatgacatcactcggggtaaaggtgatggccagggactcgcgacactcggacccc
aaagtcctcctatctgccatctgcagccagtggttaccggtctctcgcgccgtcctgtcg
atggtgtgcgagaagcttcccagtcctttggacatggcagccgagcgcgtggagaaactg
atgagtgttggagcaagacgatttgattcgttacccgaaaagactcaagaacttaaaaaa
gcgttccttcagtgttccagtgaggaaaacgctcccgtcatcatcttcgtgtccaagatg
ttcgctgtggacgtcaaggccctgcctcagaacagacagaggccgttaacccaggaggag
atcagtcagcgtagagaactcgctcgacagagacacgctgaaaagctggcagccgatcag
atggcagcaacagagggcaacaaagaccacggccaacctgccggactcggcacagctaaa
atggagagtctgacattgaaggagtcgaagccggaggaggaagaggagcagagggagacc
tttgtcgcgtttgcccgcgtctacagcggcgtggtcaagaaaggacaacgggtctttgtg
ctgggaccaaagtacgaccccgcccagggcctgagcacgttgccggaaaattgcactgct
tcagactgtgcgactgaggtgccttatctgtcccgttgttccatggagagcatctatctg
ctgatgggtcgagagctggaggagctggaggaggtgcctgcggggaacgtcctgggtctt
ggaggtctggaggactttgtcttgaagtcggccactctctctacgtccgctgcctgcccg
tccttcgctccgctcaactttgaggccacgcccatcgtacgggtcgccatagaacccaaa
catccaagtgagatgccaaagctggtgcgtgggatgcgtttgttgaaccaggccgacccc
tgtgccgaggttctgatccaggaaacaggagaacacgtcctggtcactgccggtgaggtt
catctacaacgctgcctggacgacctccgagagaggtttgccaaaattaaaatcgccgcg
tccgagcccatcattccattcagagagacggtggtgcgtcctcctaaagtggacatggtg
aacgaagagctgggcaggcagcagaaggtagccatcattcaccaggtgaaagaagaggcc
tcacagagccgtttatcagacaacctacatgtggaccccaacggtctggtgaccctcacc
acccctaacagacttgccactgtcggcgtccgggcaattccgctgccacaagaggtgacc
agtctgttggagaggagctcagagctgattcggaccctggagcagatgaacttgtccctg
agggaggggaagaatctggacatcagtgtcggcaccatggacgccatcgccggactgaag
gcccagctggagaacctgctgcaggggaggaggtggaggagcgctgtggagcgaatctgg
gcttttggtcctcgcaggtatggtccaaacatactgctgaacagtgttgagggctaccag
agaccctcagtgtggcagtgtctgaaccggggtggtgaagttggcgaggccggagctccg
gctgcaggtctgcgagactttgacagcagcatcatcagcggcttccagctggcaacgctg
tcggggcccatgtgtgaggagccactgatgggggtttgcttctccatcgagagatgggac
atccagtcctcagccccatctcagaatcaggactcgccactggacatatctaatgagggt
ttagcagaagttcatgaggcatctccagcagcagcagcaggtctgaaccaggccagacgg
agggcagacgctgccttggccgactgctacggtccagtttccggtcagctgatcgctgcc
acgaaggacgcctgccgtcacgccttccaggctcagccccagagactcatggctgccatg
tacacctgtgagatcatggccaccgctgaggtgctgggccgagtgtacggtgttctgggg
aagcgcgagggccgcgtcctcaatgaagagatgaaggaagggacggagatgttcatcatc
aaggccgttctgcccgtggctgagagtttcgggtttgccgacgagatccgcaagaggacg
agtggactggccagtccacagctggtcttcagccactgggaggtgattagcagtgatccg
tgctgggttcccaccactgaggaagaatacctgcacttcggcgagaaggcggactctgcc
aaccaggccctgaaatacatgaacgccgtgcggcgccgcaaaggcctctacgtggaggag
aagatcgtggagcacgcggagaagcagaggacgctcagcaagaacaagtag
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