Solea senegalensis (Senegalese sole): 122772715
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Entry
122772715 CDS
T07721
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122772715
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122772715
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122772715
NCBI-ProteinID:
XP_043886869
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All DBs
Position
LG1:complement(2333501..2346730)
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AA seq
523 aa
AA seq
DB search
MDGDVAVGVKRGSDELNMYSSSPNSLAANGSDSKKQRLDESPPSRVLHIRKLPNEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGGSPSSDPGALDLAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPSGDGETTNKDHSLLGTPSGALASYSSGGGYSSSLSLSQ
GGGTISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVYGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIRDGVGEDDLRLLFSNSGATVKAFKFF
QDRKMALIQMSSVEEAIQELMKLHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggagatgttgcagttggtgtgaagagaggctcagatgagctcaacatgtatagc
agcagtccaaactcactggctgcgaatggcagtgacagtaagaaacagcgtctggatgaa
tcgcctccctccagagttctccacatcaggaaacttcccaacgaagtctcagagactgaa
gtcattgctttggggctgccgtttggaaaagtcaccaacatactgatgctcaaggggaaa
aatcaggcgtttctggagttgggtacagaggaagcagccatcactatggtgaactactac
acagctgtcacaccacaggtcagaaacacacctgtcttcatccagtactccaaccataaa
gaactgaaaacagattcagctctgaatcagagggctcaggcagtgctgcaggcagtgtca
gcagttcaggatggaggctccccatcttctgaccccggagctctggaccttgctccaccc
cccagccccgtcctgcgaattattatcgacaacatgttttatccagtgacactggatgtt
cttcaacagatcttcagtaagtttgggactgtgatgaaaatcataaccttcaccaaaaac
aaccagtttcaggctctgctgcagttcagtgacccggtcaatgcacagcaagctaaactg
tctctggatggacagaacatctataattcatgctgcactctgcggatagacttcagtaaa
ctggtcaacctcaacgtcaaatacaacaatgacaagagtcgagattacaccagacctgac
cttcccagtggagatggagagacgactaacaaggaccattctctgttgggtaccccatct
ggagcactagcttcctactctagtggaggaggttactcatcttctttgtccctctcacag
ggtggagggaccataagtcctctgagtgctgcagcggcagcagcagcagctgcaggtcgt
gttgctctgtctggctctggagtgtcaggggtcctgttggcgtccaacctaaacgaagag
atggtcacgcctcaaagtctctttaccctcttcggagtctatggtgatgtccagagggtg
aagatcctctacaacaaaaaagacagtgctctgatccagctgtctgacggaaaccaggct
cagctggctatgagtcacctgaatggtcaaaaggtgtatggtaaagtgatgagagtgact
ctgtccaaacatcaaactgtggctttacccagagaaggactggatgaccagctcttaact
aaagatttctctggctctccacttcaccgctttaagaagccaggatccaaaaacttccag
aatatctttcctccctctgccacacttcatctctccaatatccgggacggcgtaggcgag
gacgatcttcgccttctgttctcaaacagtggagcaactgtcaaagccttcaagttcttc
caggatcggaagatggcgctgatccagatgtcgtcagtagaggaggcgatccaagagctt
atgaagcttcacaactacgacatgggagggaatcaccatctaaaagtttccttttcaaag
tccaccatctaa
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