Solea senegalensis (Senegalese sole): 122772861
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Entry
122772861 CDS
T07721
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122772861 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122772861 (lrrc4cb)
Cell adhesion molecules [BR:
ssen04515
]
Immunoglobulin superfamily
NGL family
122772861 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
122772861
NCBI-ProteinID:
XP_043887111
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Position
LG7:9925490..9961940
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AA seq
631 aa
AA seq
DB search
MLNTMISSLQHQTMKGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVKLEELEMSGNQLAVIKPSSF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDIMWLSWWLKETVPANTSCCARCHSPTVFKGRYIGELDHSYFQCDVPVILEP
PSDLNVTEGMAAELKCRTNSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGDDSQTPLPPFGWVS
SSTTKGTPVSTRTTERTYTIPVVDLDGDGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHH
QPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcaccagacaatgaaaggtcgtaggctgaag
ggggcactgtccaaccccctctttgtgctgcttttggcccttcagatcctggtggtggct
gggctggttcgtgctcagacctgcccttcagtctgctcatgcagtaaccagttcagcaaa
gtcatatgcactcgccgcagtctacgggatgtcccagatggcatttccaccaacactcgc
tacctgaacctccaagacaacctcattcaggtcatcaaggtggacagttttaaacatttg
cgccacctggaaattctacagctgagcaaaaaccacatccggagcattgaaattggcgcc
ttcaatgggctggccagtcttaacaccttggagctttttgataatcggctcacgacaatc
cccaatggagcctttgagtacttgtccaaactgaaggagttgtggctacggaacaaccca
attgaaagtataccatcatatgccttcaacagggtcccctcacttcgaaggctagattta
ggtgagctcaaacgtctctcttacatttctgatggagcattcaaggacttgagcaacctg
cgttacctgaacctgggaatgtgcaatctcaaggagattcccaacatcctacctttggtc
aagcttgaagaactagaaatgtctggaaaccagcttgctgtaatcaaacctagctcattt
acaggattagtgaatctccagaagctgtggatgatgcatgcccagatccaaactattgag
aggaattcctttgatgaccttcagtcactggtggagctcaacctggctcacaacaacctt
acctttctaccacatgacctcttcacaccattgcatcgcttagagcgggtccacctccat
cacaacccctggaactgcaactgtgatataatgtggctcagctggtggctgaaggaaact
gtacctgctaataccagctgctgcgcccgttgccatagtcctacagtttttaaaggtcgc
tacattggggaactggaccacagctacttccagtgtgatgttcctgtcattctagagcca
cccagtgacttgaatgtgacagaaggcatggctgcagagcttaaatgtcgcacaaactca
ctgacatccatcagttggcttacaccaaatggctcattggtgacccatggggcttacaaa
gtgcgtttgtctgtactcaatgacgggacactgaactttactagcgtcacaatgcaggac
actgggacctatacctgcatggttagcaacacagcgggcaacatctctgcctctgctgtc
cttaatgtcacctctgtggaaaacagtggggtgacctatttcaccacagtcactgtggag
accattgagacacctggtgatgatagtcaaacgccacttcctccatttggctgggtgtca
tcctcaacaacaaaaggtactcctgtgtcaacgaggaccacagagcggacttacaccatt
ccagttgttgatctggatggagatggagccctcaatggcttggatgaagtaatgaaaacc
acaaagattatcattggctgctttgtggccatcacactcatggctgctgttctgctggtt
attttctacaagatgaggaaacagcataaccagcaggatcctgatggtcctgcctcctct
atggaggtcattactgttgaagaagagcttgcaggtgttgctgccatggagagacaccta
tcgctgccccctctggagcactacaaccactacaacacctacaagagcacttaccaccac
cagcccatgctgagtaccatacacagctcagccacacaggaacctttactgattcaagct
tgctcaaaagacaatgtacaagagacccaaatctaa
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