Solea senegalensis (Senegalese sole): 122772871
Help
Entry
122772871 CDS
T07721
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122772871
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122772871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
eIF2A
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_LRRK2
PROPPIN
RMC1_N
VPS8_N
Ge1_WD40
Beta-prop_NUP159_NUP214
WD_LRWD1
WDR54
Cytochrom_D1
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
122772871
NCBI-ProteinID:
XP_043887133
LinkDB
All DBs
Position
LG7:complement(20609046..20618175)
Genome browser
AA seq
700 aa
AA seq
DB search
MAAARTTKISWRLQEFEAHSSSVSCLALGKSSGRLLATGGEDCRVNIWAVSKANCIMSLT
GHKNPVECVQFNMSEEQVVAGSQSGSIRVWDLEAAKILRTLMGHKANITSLGFHPFGDFL
ASSSMDTNIKLWDVRRKGYVFRYKGHTQAVRSLAFSPDGKWLASASDDCTIKLWDLTLGK
TITEFRSHTAAVNIVQFHPNEYLLASGSSDGTIKLWDLEKFTMISSLEGDMSPVRCVSFS
PDGSCLFSGATDSLRVFGWEPDRCFDMVSVGWGKVSDLAVCNQQLIGVSHQLSSVSSYVV
DLKRVKQSGSFVIQGIVRDNEPLTEPKDPKGAALRKNYERPTTTCSSQRVKQRADTERPS
PEGERRSPSEDEADEKASSAEIHNAEDFKEIFQPKNAISRTPPKMSEPFPAPPEDETILA
TGRQPKDMASPFPDKMQAPPMASSTPVQRVEPTVVSSLKPQLPSAGGPSSSRPPISCPPQ
PQPPIITAKSKPQSKIIPSTRNEPIGLNVADFLPFSPNNRRAALNNEEAVSQIKKGHDTM
CVMLSSRHKNLETVRGVWVREDVKSALDTAVSMNDLSIVVDILNIINLQPSLWKLDLCMT
VLPQIGKLLQSKYESYMQTGCMSLRLIMKHFWVLIFDTLKAAPSVGVDITREERHQKCKA
CYKQLKNLGNITKIKAAQVGRHGSTFKELQLLMAPLNEAL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccagaaccaccaagatatcatggcggctgcaggagttcgaggctcactcc
agcagtgtctcctgtttggctctggggaaaagctccggccgcctgcttgccacaggagga
gaggactgcagggtcaacatctgggctgtgagcaaggccaactgcatcatgagtctgact
ggtcacaaaaacccagtggaatgtgtccaattcaacatgtcagaggagcaggtcgttgct
ggttcacagtctggatcaatacgagtctgggacctggaggctgccaagattttaaggact
ttgatgggacataaagctaacataactagtctgggcttccatccatttggagatttcctt
gcctccagctccatggacacaaacattaagctgtgggacgttcggaggaaaggatatgtg
ttcagatataagggtcacactcaggcggtgaggagtctggcctttagtccagatgggaag
tggttggcttcagccagtgacgactgcaccatcaagctgtgggatctgaccctggggaag
acgatcacagagttcagatctcacaccgcggccgtcaacatcgtgcagttccatcccaac
gagtacctgctggcatcaggcagctctgacggcaccatcaaactttgggatctggagaaa
tttaccatgatcagctcgttggagggagacatgtctccagtcaggtgtgtatctttcagt
ccagatggtagttgtctgttcagcggagccacagactctctgcgtgtctttggttgggag
cctgaccgctgcttcgacatggtgtcagtgggttggggcaaagtctcggatctggcagtc
tgtaaccagcagctgatcggcgtgtctcaccagctgtccagcgtgtcttcatatgttgtc
gatctgaagagggtgaaacagagcggcagctttgtgatccagggaatcgtccgggacaat
gagccactcacagagccaaaggaccccaaaggggccgcactgcgaaagaactatgaaagg
ccgacaaccacctgtagctcacagagggtgaagcagagggcagacaccgagaggccgagc
cctgaaggggagagacggagccccagtgaggacgaggctgacgagaaagcgtcgtcagca
gagatccacaatgctgaagacttcaaggaaatctttcagcccaaaaacgccatctctcgg
acgcctcctaaaatgtcggagcctttccctgctcctccagaggacgaaaccatcttggcg
actggccgccagccaaaggacatggcttctccatttcctgacaagatgcaggctcctcca
atggcgtcttctactccagtccagagggtggagcccacagtggtttctagtctcaagcct
cagctcccctcagcaggtggcccatcgtcctcccgaccccccatctcctgtccccctcag
cctcagcctcccatcatcacggcaaagtctaaaccacaatcaaaaatcatcccgagtacc
aggaatgaacccattggactgaacgtggctgatttcctgcctttttcaccgaacaacaga
cgtgcagctttgaacaatgaggaggctgtgtctcagatcaagaaaggtcacgacaccatg
tgcgtgatgctgagcagccgacacaagaacctggagacggtgcgaggcgtgtgggtcaga
gaggacgtgaagagtgctctggacactgctgtctccatgaatgacctctccattgttgtg
gacatcctcaacatcatcaacctccaaccgtctctgtggaaactggacctttgtatgacg
gttctccctcagatcggcaaactgctgcagagtaaatacgagagctacatgcagaccggc
tgcatgtctctgaggctcatcatgaaacatttctgggtgctgatcttcgacacactgaag
gccgcaccatctgtcggagtggacatcacacgagaggagcgacaccagaagtgcaaagcg
tgctacaagcagctgaagaacctcggtaacatcacgaagatcaaggcggcacaggttggt
cgtcacggcagcaccttcaaagagctgcagctgctcatggccccgctcaacgaggcactc
tga
DBGET
integrated database retrieval system
