Solea senegalensis (Senegalese sole): 122772901
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Entry
122772901 CDS
T07721
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssen03037
]
122772901 (rttn)
Cilium and associated proteins [BR:
ssen03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122772901 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
PWP3A-B_C
Motif
Other DBs
NCBI-GeneID:
122772901
NCBI-ProteinID:
XP_043887172
LinkDB
All DBs
Position
LG1:26160701..26194028
Genome browser
AA seq
2236 aa
AA seq
DB search
MELSPLIKKIGHSLLEIRVRALKSIICKLDHSLISVSDIVQEKMLFVYLLEWFNFPEVPM
QEEVLELLTTLSKHSSAAQMLRDVGAVDFLTQLSPNVEPRLQAVISGILDQLFHLPDIFP
SKTIVYSHGPHDTAPIAPTVVPPEDFSKTGYFQRSMPACADVPPHKIAVHESVRCLKFSV
FPWLTLTNTDGHILSSNESSLRSNKLNLVQTTCDLLHDVIMQDFPPEIFLQRPSIVKNLL
SLLRVGSSKGEPSYPHLQAFSCLRQLCVGLRRRLRFHQDPSFYSTKQDPVSQNSSFSYSQ
EVRGTQRSQASSPGAECTPRPSVVGRRGQRARGDGQDGDAGSNSGSSHRGGAAVQAPRQM
PQSPTDVAHLELPDLGVDDVLELQLQQLTLAQFTVDVMEHAIPLLKTEGLHVFHRVLELL
CDTILLLGDSVSELVWDDHSLVGMELKEKLQAFMEILGDILNYHQSYPADIPHSAQIQHR
MAYMGTAIFTIKLLQTILPSEKAGDILPESTTTALFHLCLDTSLGTLLPSMQETAVAYLE
QVNSDNHDLYRRVTRAALWMESTCNFLKEAQANGEKNWLELLELADQAIEGLPFHQHLPI
VKECVHICSYLWKFDQPSPLLQTESQKLLLKLLSHPLLPVKTETYTCTLNLVKDCIGIHN
VTRQEPGPCGGVNFLLHHRVLYEMSAFGLQDSAEKVNAAAKDILLFLLKGRLMMTASTWD
RFNEALYPVMPILQGYASTEESLGKCVLLISDMSDVSRDNVFPSTAKLKAALRLLFTKQP
AVRIAAVQQVIPHLTSTVEANTARPGLDQPVISALPNLYCVRNPLDITLDTNRVSVLKVE
SVEKLFCILSSDTVEMSLRRSAAEQLSVVLQDTTIHPVLKNLGITDKVLSFIMQSVNGSE
SMDCLLEPCVCILRKLVYADPSLRHSLAQRNLLLLTLLRASLILKENKSNGNEIAVLMSL
LLFDEIATIEIWSDKSSTNVTLAPFSLPLNVILRYNIPFQAANHHAVSPYCCVLPPYSDL
LALVPARQALQVAWNTAWHSGIDNLLEELCDTSTKVSEFHSDLKLSEAQVLALQAVHPPT
ALQDCIQAIVTAAGHSSVTSALSRLSLYLLMDRLALPHIPTLSCRDTLHSLSWQAAMTRF
LQVSPACVEDERLLVGIVAFLNAYFKQMHTKSASHPEDNDLRWILELLLNQEKVSLLNLL
VMETQTSTQNTVEPLELKNRVSQRLQRELTSFFNTLLLHLSHTTDRLCLALAGRFKSQLA
ICLLRSLRVSDAPRFYGLPSLERTLQGMVCLTAHPGWSSHCLDLEPSSLCSKYLSGLLEV
ISSFYVEWGGNSMSFMGKGVTKNAVICLLHLSHEMLAAENKDKNFISQWTLGNDAAAEET
SASQLGLAWLVPLWVDRDQEVRFASLALGGALSSVPNGCQALCTSCQNISGGLWGTLLNI
VLDQQESSMVRREATFILQNLLVMPMPANAEEAKDSDWQHPCVHDEVSGISLVGLPALQA
LLYHCQYFQHVALSASGCYRGRYTFHLQPVSSGSTQESDSLDSENSLLWRCDPPASTVNS
RRPSSSLSTSSTSIRSSEPLTSKGLSSLSISEDTPANRLMAQGQSDTDTSDSITSQDSRQ
AEPSAAEPVVMVTPDLLTAHCGLLTNLLSILSDFTLTAIRHNQLLQALASLVDIRPIEKC
LNELNSPNVLPGEREVIKSQFVTLIQFLSSFSKLLQSCVTVSQDIIVELDFLKHLLTPLV
SVLMLDSKGLDAGTQDTVCLCWADVFMLLATLVRRDSSAAYPSVSAALGKCWRTFAGTLS
VCLTERFADPLLYTVALQFLCTIFTEETKSRGVEATASDSMYATSLSDIVNGPSATQLCE
LLLQSFDKRTLQDPLKKLTGGALMTLLTCSPTAQNHAAKAGLIDSCVEQMKQTHSQLHLE
SVRPSKASHRKKEEGHFKEVKLTVEILRSALYRNDECKVVASDARLTQTLYALWPWFLLD
DPTMEAVLELLCVYTADCTTACSLVCGTVLSGSKGTSSSSLMLTVMKLATGVAPDNSPIQ
KLAFALLTNLAMSRDCRGVLLKNNFLQTFTSVPTPRAGGVKAISVASGGSLLTLWLKLLL
SLSFAEDIQQSILRVNGVLELLADLAPHRRHALLILHNLCFCPANKPHVIANDKAMKALL
RCLESKDLETRCMGSSAIWALLHNNQRAKTTLKCPSIRVRIEEAHTVSKKDAERPQEPMS
AYLLKCLENVSQLLNN
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtccccgcttataaagaaaataggtcactctttgctggagataagagttcgt
gcgttgaagagcatcatatgtaagttggaccattccctgatttccgtctcggacattgtt
caagaaaagatgttgtttgtgtatctcctggagtggtttaatttccccgaggtgccaatg
caagaggaggtcctggagttgctcacgactttatcaaagcattccagtgcagcccagatg
ctgagagacgttggggcagtggacttcctcacccagctatcccctaatgtggagcccaga
ctgcaagctgtcatcagtggaatcctggaccagctgttccacctaccagatatattcccc
agtaaaacaatagtctactcacatggaccacatgatacagctccaatagcccctacagtt
gttccacctgaagatttttctaaaactggttatttccagaggagtatgccagcctgtgca
gatgtaccccctcacaagatagcagtgcacgagtctgtgagatgtctgaagttttctgtg
tttccatggctgactttgacaaacacagacggacacatactttcatccaatgagagttcc
ctaaggagcaacaagctaaatttggtgcagaccacatgtgatcttctgcatgacgttatt
atgcaggattttcctcctgagatctttctgcagagaccaagtatcgtgaagaaccttctc
tccctgttgagggtgggttcgagtaaaggtgagccaagctacccccacttacaggctttt
tcctgcctgcggcagctttgtgttgggctaaggaggcgacttcgctttcatcaagatcca
agcttctactctacaaagcaagatccagtgtcccagaactcttccttctcctactcccag
gaggtgcggggcacccagcgctctcaggcctcttccccaggtgcagagtgcactccgcgg
ccctctgtagtcggacgcagaggccaaagagcaaggggagatggccaagacggagatgca
ggttctaacagtggcagctcacacagaggtggagctgcagtccaggcccccagacaaatg
ccccagtcacctacagatgtggcccatttggagctccctgacctgggtgtagatgatgtc
ctggagttgcagttacagcagctcactttggcccagttcactgttgacgtcatggagcat
gctataccacttcttaaaacagagggtttgcatgtgttccatcgtgttctggagctgctg
tgtgacacaatccttctgcttggggacagcgttagtgagctggtctgggacgatcacagc
ctggtggggatggagctgaaagagaagctgcaagccttcatggagatactgggagatatc
ctaaactaccatcagagctatccagcagacattcctcacagtgctcagattcaacacaga
atggcctacatgggaacagccatatttactattaaactcctacagaccatcctcccatct
gaaaaggctggtgacattttaccagaaagcaccacaacagctcttttccacctatgcttg
gatacgtcattgggaactttattacctagcatgcaagaaacagcagtagcttacttggag
caagtgaactctgacaaccatgacctgtacaggagggtgacccgtgctgccctctggatg
gagtccacttgcaactttctcaaggaagcacaagcaaatggagaaaagaactggttggag
ttactggagcttgcagaccaagcaatagaaggcctcccgtttcaccagcacttaccaatt
gtgaaggaatgtgttcacatctgctcttatctttggaagtttgatcagcccagtcctctc
ctccaaacagagagccagaaacttctccttaagctgctgtctcatcctttgctgcctgtt
aagacggaaacgtacacatgcactcttaacctggtcaaggactgcatcggcatccacaat
gtgacacgacaggaaccaggtccctgtggtggagtaaacttccttctccaccatagggtg
ctgtatgaaatgagtgcttttggactgcaggactctgcagaaaaagtgaatgctgctgcc
aaggatatcctgctattcctgctcaagggacgattgatgatgacagcatcaacctgggac
agattcaatgaggcactttacccagtcatgcccatattacagggttatgccagtactgaa
gagtccctgggaaaatgtgtcctgctgataagtgacatgtcagatgtgtcaagagacaac
gtgtttccaagtactgccaagttaaaagcagcactgcgactcctcttcactaagcaacct
gctgtgagaatagcagcagtgcaacaagtcattcctcacctaaccagtactgtggaggca
aacacagccagaccaggcctggatcaaccggtgatctctgcactcccaaatctctactgt
gtcaggaatcctttagacatcacactggatacaaacagagtgtctgtccttaaggtggag
tcggtggagaagctgttttgtatcctgtcctcagacaccgttgaaatgtctctgagaaga
tcggctgctgagcaactgtctgtggtgctgcaagacacaacaatccacccagtgctgaag
aatcttggaataacagacaaagtcctttctttcattatgcagagtgtcaacggcagcgag
agtatggattgcctgctggagccttgtgtatgtatcctgaggaagctggtgtatgctgat
ccatctctgaggcacagcctggcacagcgcaacctcctgctcctcacactgcttagggca
tccttgatattgaaggagaacaaaagcaatggaaatgagatcgctgtcttgatgagttta
ctgctctttgatgagattgccaccattgaaatatggtcagacaaatccagcacaaatgtg
acactcgcaccgttttcactacccctgaatgtaatactcagatacaacatcccattccag
gcagcgaatcaccatgctgtcagcccgtactgctgtgtccttcctccatactctgacctc
ctagccttggtccctgcacgccaagccctgcaggtggcttggaacactgcatggcattca
gggattgacaacctcctcgaggagctgtgtgacacctcaaccaaagtttctgaatttcat
tctgacttaaagctgtcagaagcacaggttctggcactacaggcggttcaccctcccact
gcgctgcaggactgcatccaggccatcgttacggcagcaggacacagttctgtgacctct
gccctttccaggctcagtctctacttgctgatggacagactggctctcccgcacatcccc
accctcagctgcagagacactctacactctctcagttggcaggcagcaatgaccaggttt
ctccaggtgagtccagcctgtgttgaggatgagaggctgctggtgggcattgttgcattt
ttgaatgcctactttaaacagatgcacaccaagtctgcatctcatccagaggacaatgac
ctgcgctggatactggaactgcttctcaaccaggagaaagtgtccctgcttaacttgctt
gtcatggagacccagacctcaacccagaacacagtggaaccactggaactgaagaaccgt
gtcagccagagactacagagagaactcaccagcttctttaatacgttactcctccatcta
tcacacaccactgacaggctgtgtttggcattagcaggacgcttcaagagccagctggca
atctgtttgcttcggagcctgcgggtgtctgatgctcctcgtttctatggccttcccagc
ctggagaggacactgcagggcatggtctgcctcactgcccaccctggctggagctcccac
tgcctcgatctggagccctcctccctgtgctcaaagtatctcagcgggctgttggaggta
atttcctcattttatgttgagtggggaggcaactctatgtctttcatggggaaaggtgtg
acaaagaatgctgtcatctgcctgcttcacttgtcccatgagatgttggcggctgaaaac
aaggacaagaacttcatatcccagtggactttgggaaatgatgcagctgctgaggagacg
agtgcctctcagctgggtttggcctggctcgtcccactatgggtagaccgagaccaagag
gtgaggtttgccagtttggctttgggtggagctttgtcctcagtgcccaacggatgccaa
gctctgtgcactagttgtcagaacatcagtggtggtctgtggggcacattactcaatatc
gtccttgatcagcaggagagcagcatggtccgcagagaggctacatttatcctgcagaac
ttgcttgtgatgcccatgcctgccaacgcagaggaggccaaggactccgactggcagcac
ccatgtgtccatgatgaggtgtccggtatctctttggtgggtcttccagcactccaggct
ctgctctaccactgtcagtacttccagcatgttgctctctctgcctctggctgttacaga
gggaggtacactttccacctacaaccagttagcagtggcagtactcaggagagtgactca
ctggattctgagaactctctgttgtggagatgtgacccaccagcatccactgtcaactcc
aggagaccttccagctccctttctacatccagtacctcaataagaagttcagagccactc
accagtaaagggctctcctcactgagcatctcagaagatacaccagccaacaggctcatg
gctcaaggccagagtgacacagacaccagcgactctattacctcccaagattctcgacag
gctgagccctcagccgccgaaccagttgtcatggtaactcccgacctcctgacggcccac
tgtggcctgctgactaatctgctgtccatcctgtcagatttcactctcactgccatcaga
cacaaccagctcctccaagccctggccagtctggtggatatcaggcccattgagaaatgt
ctaaatgagctaaattcacccaacgtgctgccaggcgagcgagaagttatcaagagccag
tttgtcaccttaatacagttcctgtccagcttctcaaagctgctgcagtcatgtgtcaca
gtgagccaagacattattgttgaactggacttcctgaaacatctgttgactcctctggtt
tcagtgctcatgctggacagcaaaggactagatgcaggtacccaggacacggtttgtctg
tgctgggcagacgtgtttatgcttctggctactctggtgaggagggacagctcagcagct
tacccatctgtctctgctgcactggggaaatgctggcggacatttgcaggaactttgtca
gtgtgtttgactgagaggtttgcagaccctcttctctacacagtggcgctgcagtttctc
tgtacaatattcacagaggagacaaagagtcgaggtgtcgaggccacagcctctgactcc
atgtatgcaacttctttgtctgatattgtcaatggtccgtcagccacccagttgtgtgag
ctactactgcagagttttgataaaaggacccttcaggaccctttaaagaagttgacaggt
ggagcgttgatgacactgctaacctgcagtcccacggctcagaaccatgctgccaaagct
ggtttaattgacagctgtgtggagcaaatgaagcagactcattcccagctccacctggag
tcagtccgacccagcaaggcttctcaccgcaaaaaggaagagggccatttcaaggaggtg
aagctgactgtggagatcctgcggagtgctctttaccgcaacgatgaatgcaaagtggtg
gcctcagatgctcgcctcacacaaaccctctatgctctttggccttggttcctgctggac
gaccccaccatggaggcagtgctggaactgctttgcgtctatacggccgactgtaccaca
gcatgcagtttggtctgcggcactgttctgtcgggatcaaaaggcacctccagcagctct
ttgatgctcaccgtcatgaagctggccacaggggtcgccccagacaacagtccaatccag
aagctagccttcgctctgctgaccaaccttgcaatgtcccgcgactgtaggggcgtcctg
ctaaagaataacttcctgcaaaccttcacctcggtgccgacacctagagcaggtggtgtt
aaggccatttctgtagccagtggcggcagtctactgactctgtggttgaagctgctgctc
agtctctcatttgctgaagacatccaacagagtatccttagggtaaacggcgtcctggaa
ctgctggcagacttggctccacaccggcgccacgcactgctcatccttcacaacctttgc
ttctgtcctgccaacaagccccacgtcatcgccaatgataaagccatgaaagccttgctg
cgctgtctggaaagtaaagacttggaaactcgttgtatgggctcctctgcaatttgggcg
ttgctgcataacaatcaacgggccaagacaactttaaagtgtccttcaatacgtgtgagg
attgaggaggcacataccgtctctaaaaaagatgcagagagaccgcaggagccgatgagt
gcctatctgttaaagtgccttgaaaacgtttcccagctgctaaataactga
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integrated database retrieval system
