Solea senegalensis (Senegalese sole): 122773004
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Entry
122773004 CDS
T07721
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122773004 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122773004 (rsf1a)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
122773004 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
Motif
Other DBs
NCBI-GeneID:
122773004
NCBI-ProteinID:
XP_043887293
LinkDB
All DBs
Position
LG8:complement(11319650..11332963)
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AA seq
1511 aa
AA seq
DB search
MVLVLCSLTPVNVRSSFISLASQQRALPSCFSPLGKMAPPAVARSSGPALCPSFAEACSF
LDRYGAALDLPEMTFPQMERYLRETTSVPKPLVELHVKLLRKLGRSVTTDRWEKYLAKVC
QELNSTWAWELEQKGYQEMSMECKSSILKYLCECQFDDNLKFKMAINEEDPDKMRLQPIG
RDQQGLMYWLQLDQEQNIRLYTEEQDDLDGSTWKCIVRTRNDLAEALDLLKAQIDPNHSQ
ERDQNQAESTENAGDEATGGSNPDPSKAAEEHTEPKTVDQVKEPLKQVIDQEQLQPIKQE
NTEAEVKEERVDHKPPVFDNRVSTITTIVKAESRDADTPKNAVSVVMSPGASVVKPELNK
EDEAGRAVVRSSHQAKIPLKKRELKLAESYQSNHVNNNNSSSSSSSIIVCNPSVIQSKDG
HGREGNLSNSLAPPHGPSVCPQEQQQLMAAASRQELTNGRPSVLLPHKEGHNGVIGVIGQ
VGVIGHVGVIRSPSERHRAAGAEQQEPNGPGSDLWGSRAVEGDREVSRQSVLVRKGPMER
DSAAALAPHKAMEAQTVRKLPTLTLSKCDSTLEAAVRKVESDAVSSQSTEEPKRQPAKDL
GKETTEGHLDRGTKTGLSHQQKDDNNDGRAGRTKKISVAEEGNNDDHEKNRSTLLKLEVE
SVDTVPPLKVDQRDEKGHTDHQGDGVNGELEAQVRVKDNGVGSAVRQGLLEEASSELQKE
GIRLKIKIPPHRRNKLKGKGGKGEEKEGEQDGQDDGRPLRRSARICRSSALPNCRPSSKA
AESQRKKPQKKQALASRTREDEQEEDEEEEEEEEEEQSSAIKNSRKAELVMQSRKRRGKR
RHRRPRWSNIRSKRRKLNEGEEVEDRRKKQGEEESEGGSDSEESCKSEDIPSEDACTHCG
LPNHPELILLCDSCDSGYHTACLRPPLMLIPDGEWFCPPCQHKMLCEKLEEQLQNLDSAL
KKKERAERRRERLVYVGISVENIIPGDEEDDEEEEEERSPKKKVSEKSKNLGRRSTRTRK
HISYRFDDFDDAIDEAIEEDIRDLCGGTGPGKEINTMPAEDGKESQRPIRSQAHFVRSRK
KRRLNDLESDSTAAESEDEFMLSNSSEDEDFGASGADDYEEEEDGGSDVGSLESGIPHKR
ALKRALKHRVSKTQHRGRKRPRRRRRRSSEEEEEESEEEMDSDQFSDMTDSDADKKRRGL
RRGQRQQVNYRETSESSDNSRPSASQNKVRPRGRPRKERLSSDYSDVSHSSRDSDEEEED
YEDEEDDQKRRRIRRREEKDLQRRRMKDKWRRGKDDKDEDNRERRRRLKEKELKEVEKDK
RRRLKRTDRKEEDLEKMGRGRRREILSQQRRKRLAQMLKKQRPSTDDDDESEDSESSSEE
DRPIRKRLNRIDSDDDDEEDEEEEGRQKRKSSASERRVDGDTQEKGRGHSLSPSNRHQTS
RGLAKPGDGSPTTTKDGAELGRQGKHNGPFHPEDLEEEDEEGDEGDEEDDDEEGEEGQTD
SLNSVQNSPLS
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgtactgtgtagcttgacgccggtgaacgttcgctcttcattcatttcactc
gcatcccagcagcgagccctcccctcctgtttctctccgcttggaaagatggctcctccg
gcagtggcgaggagctctggcccggcgctatgcccgagcttcgcggaggcctgttcgttc
ctggaccgatatggagcggctctggatctgcccgagatgactttccctcagatggagagg
tatctgcgggaaacgacatcagtccccaaacctcttgtggagctccacgtgaaactactc
agaaaattgggaagatctgtgacaacagatcgctgggaaaaatacctggctaaggtttgc
caggagttgaatagtacctgggcatgggagctggaacagaagggctaccaagagatgtcc
atggagtgcaagtcaagcatcctcaaatacctctgcgaatgtcagtttgatgacaacctc
aagtttaagatggccatcaatgaagaggacccggacaagatgcgtctgcagcctataggt
cgggaccagcagggcctgatgtactggcttcagctggaccaggagcagaacatccggctg
tacacagaggagcaggacgatctggacggatccacatggaaatgcattgttaggactcgt
aatgacttggctgaggctctggacctgttgaaggctcagattgatccaaaccacagtcag
gagagggaccagaaccaggctgagtccacagagaatgcaggagatgaagccacaggaggc
agcaaccctgacccttccaaagctgcagaagaacacaccgaacccaagacagttgaccaa
gtcaaggagcccctaaaacaagttatagatcaggagcagctgcagccaatcaagcaggaa
aacactgaggctgaagtgaaagaagagagggtagaccacaaaccccctgtgttcgataac
cgtgtgagcacgatcacgaccatcgtcaaagcagaatccagggacgctgacacccccaaa
aatgctgtgtcggttgttatgtcaccgggtgcatcagtggtgaaaccggaattgaacaag
gaagatgaagcagggcgggcagttgtcaggagcagccaccaggccaagataccactgaag
aagagggagctaaagctcgcagaaagctaccagagtaaccatgtgaataacaacaacagc
agcagcagcagcagtagtattattgtgtgcaacccctcagtgatccagagcaaggacggt
catggaagggaagggaacttatctaactcattagctccacctcatggtccatctgtgtgc
ccgcaggagcagcagcagctaatggctgctgcctccaggcaagaactgaccaatggaaga
ccgtctgtccttctgcctcacaaagagggacacaacggagtcattggggtcattggtcaa
gtcggtgttataggtcatgtaggtgtcatccgcagcccgtctgaacgacaccgagccgcc
ggtgctgaacagcaggagccaaatgggccagggtcagacctgtggggctccagagcagtg
gagggagatagggaggtgagcaggcagtcagtgctggtgaggaagggacctatggaacgg
gactctgctgctgctcttgctcctcacaaggcgatggaggctcaaaccgttcgaaagctg
ccaacattgacactctctaaatgtgattcaacccttgaggctgcagtgagaaaagttgaa
tctgatgccgtatcttcacagtctacagaggagcccaagagacagccagcaaaagacctt
ggtaaggagacaacagagggacacttggacagggggacgaaaacaggactcagtcatcaa
cagaaagatgacaacaatgatgggagggcggggaggacaaaaaaaatatctgttgcagag
gaaggaaataatgatgaccatgaaaagaacagaagcaccttattgaagctggaggttgag
tcagtagacacagttccacctctaaaagtggaccagagagatgaaaaaggccacacagac
caccagggagatggggtcaacggtgagcttgaagcccaggtcagggtgaaggacaatggt
gttggatcagcggtgaggcagggtctcctggaggaagcctcctctgagcttcagaaagaa
ggaatcaggctgaagataaagattcctcctcacaggagaaacaagttaaaaggaaaaggg
gggaaaggcgaggagaaagagggggagcaggacgggcaagatgacggcaggcctctgagg
agatctgcccggatttgcagatcatctgctttgccaaactgcaggccgagctcgaaggca
gcagagagccagagaaagaaacctcaaaaaaaacaggcactggcttccagaacgagggaa
gatgagcaagaagaggatgaagaagaggaagaggaggaagaagaggagcagagctctgcc
ataaagaatagcagaaaagcagaactggtcatgcaaagcaggaaacgaagggggaaacgg
aggcatcggcgcccccggtggtccaatattcgctcaaagaggcgaaaactgaacgaggga
gaagaggtggaggacagaaggaagaaacaaggagaggaggagagcgagggagggagcgac
tcagaagaatcctgtaaatcagaggacatccccagtgaagatgcctgcactcactgtggc
ctgcccaaccaccctgaactgattctgttgtgcgactcctgtgacagtgggtaccacact
gcctgtctgcggccaccgctcatgttgattcccgacggagagtggttctgtccaccttgt
caacataagatgttgtgtgagaaactggaggagcagctacaaaatctggacagtgctttg
aagaaaaaggagagagcagagaggaggcgggagcgcctggtgtatgtgggaatcagtgtg
gagaacatcattcctggagatgaggaggacgacgaggaggaagaggaggagaggtctccg
aagaagaaagtttccgaaaagagcaaaaatctcggaaggagatcaacaagaaccagaaaa
catatcagctacaggtttgatgactttgatgacgccatcgatgaagctatagaagaagac
atcagagacctctgtggtggaacagggccgggcaaagaaatcaataccatgcctgcagag
gatgggaaagaaagccagcggccaatcagaagccaggcacattttgtgcgcagcagaaag
aagcggaggctgaacgacctggagagtgacagcacggcagcagagagcgaagacgagttc
atgctcagcaacagttcagaggatgaagattttggcgcgtctggggcagatgattatgag
gaagaagaagatggtggcagtgacgtgggcagcttggagagtgggataccccacaaacgg
gcgctgaaaagggcactcaaacacagagtcagcaagacccaacacaggggcaggaaacga
cccaggcggcggcggagacgctcctccgaggaagaggaggaagaaagtgaggaagagatg
gactctgaccagttcagcgacatgactgacagtgacgctgacaaaaagagacgaggcctg
agacgcggccagcggcagcaggtcaactaccgcgagacatccgagtcctcggacaactcc
cggccgtccgcctcccagaacaaggtcaggccgagagggaggccgcgcaaggagcgtctt
tccagcgactacagtgatgtgtcgcactcttccagagactcggatgaggaagaggaggac
tacgaagacgaggaggatgaccagaaaaggagaaggatcaggagaagagaggagaaagac
ctgcagaggaggaggatgaaagacaaatggaggagaggcaaagatgacaaagacgaggac
aacagagagaggcggaggcggctgaaagagaaagagttgaaggaggtggaaaaagacaag
cggaggagattaaagagaacggacagaaaagaggaggacctggagaagatgggcagagga
aggaggcgggagatcttgtcacaacagcggcgcaaacggctcgcacaaatgctgaagaaa
cagcggccttccacagatgacgacgacgagtcagaagattcagagtcgtcatcagaagaa
gatcgtccaattcgcaaaagactcaaccgcattgactcagatgatgatgacgaggaggat
gaggaagaagaggggaggcagaagaggaagtcttcagcttcagagaggagggtggatggc
gacactcaggaaaagggaaggggccacagcctgtcgccatcaaacagacatcagacctcc
agagggttagccaagcctggggatggaagtcccacaacgaccaaggatggtgcagaatta
ggcaggcagggcaaacacaatggccccttccatccagaagacttagaggaggaggatgaa
gagggggatgagggggatgaggaggacgatgacgaagagggggaggagggccagacagac
tcattaaactctgtccagaacagtccactgtcatga
DBGET
integrated database retrieval system
