Solea senegalensis (Senegalese sole): 122773095
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Entry
122773095 CDS
T07721
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122773095 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122773095 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122773095 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
ssen03029
]
122773095 (rb1cc1)
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122773095 (rb1cc1)
Membrane trafficking [BR:
ssen04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122773095 (rb1cc1)
Mitochondrial biogenesis [BR:
ssen03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122773095 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122773095
NCBI-ProteinID:
XP_043887427
LinkDB
All DBs
Position
LG1:16144441..16157475
Genome browser
AA seq
1609 aa
AA seq
DB search
MKLYVFQVNNGSTLTFNTDLAVQTVLELKHAIQTKYKIAVQHQVLVVSGGECMFAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTLSIESEIQVKVEESLMMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCSLSYRKLLRKFDTSYTNYQH
DLEEIKLKLTKLGTAVSVMARIPLLESLTRQSYRASIEKSSSTTEKDSNETAEEKSTDSV
LRTTEAKTKSSTSCSASGAATCERGDQETDEMTGSGELRAALLDDDSPDFANPSSFNVTL
LDWINVQDRPNDVESVVRKCLDSISRLDPRIIQPFLADCSETIAKLDNQNMKSIKGLEDR
LYALDQMIEICNKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLNNHR
KLLEIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDSEKLLALLKLLMELKERVKVVEA
LSTAPQMYCLAVVEVVRRKMFMHHYKEWAYALVKDGEQLYEAEKLKRKSFGKLFRKSFLK
NSLFRGLESWPSSSFCTQRPRGFDDELPDISLEDLQYLKSCCPLEVQPFLMIPTMCDFEP
LNRHVNSLHQLVQAAQSVDEMSQTITNLLSEQRASCCQSTPQSESIPGSLVSSKTPASLS
LHGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDLDSLAESPES
DFMSAVNEFVIEENLTSPNPISDPTSPDMMVESLYSSVINAIDHKRMQDTTTLERENLRI
TVLKQVIDKYQSAVEESQSNLKSVKDDLHHLRGLALKEQHDFCFVLKYTTTQVCKIVDNF
CHTHELKFKEQHQSELLSVRQDLEKQIETLTKENQVNQNIVRDVQRAMLDLEGLMERKEK
ELTQLENEKERWLEMESNLTDRITNLEQVISDQAEEIKVVSAARDSLTSQIENLHFEIER
SQQRIRQEMEEVMQSNLKELEVKMEQEHKEELETLTGNNQEALEHLAAENSAKLSEAADH
HATVLGEKDNQIKDLEARVTELAELRCKVEVELAFRESETEAVRLLFEEAKIQQSEAVKS
QVEAETKALSLELENVKQQLQAKNEEYEVDLAELRTLMRIEKDHCISELVDRHEEETVLL
RNEIFSMQQQAQDTERNHAELQEQLKQAVDLQLALKEEKDKELRSFQELEQELRTVINKV
QAENDLLSKKVEQDREAREKDEEKQSAKVPPPDAFKELEQQKEEMEKRLLEKIQQLETEL
HELQSSKSDEGLPLHDEGHTDSAAPLSLDSALEERLQQERASLQSQMELLEKKKNEEMQN
LKTSLIAEQQTNFNTVLTREKLKKEQIINDITEKLQKVTQQQEKDKALIESLSEDRASVM
QEKKYLEEELNRLRSTALVSSAFFSPHLSALEITEAGGATARALPVAGACSSESTGDSDR
LASVATIQDDEHVDSAVEASMVTVHDNILMSEEKQRILLLERTLHMKEEENKRLSQRLMS
QSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLTALDLKP
ASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacgtttaatacagatctt
gctgtccaaactgtactagagctgaaacatgccatccaaaccaaatataagattgcagta
caacatcaagtccttgttgtcagtggtggggaatgtatgtttgcagagagacgagtctgc
agctacagtgcaggcactgaaaccaaccccatattcctgtttaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccctctcgattgagagtgagattcaggtc
aaggtggaggagtctctaatgatgccagctgtttttcacaccgttgcctcacgaacacaa
cttgctctggaaatgtttgaagttgccaaaaaactttgctctttctgtgaacgtttggtt
catgatgaacaccttcaacaccaaggctgggctgccattatggctaatctggacgactgc
tctctgtcttatcggaagttgcttaggaaatttgacacttcatacacaaattatcaacat
gacttggaagaaattaagctgaaacttacaaagttagggacagcagtttctgtaatggca
aggatacctttgctggaaagtttgacaagacaaagttatagagcgagcatagagaagtcc
agttcaaccacagaaaaggattcaaatgagacggcagaagaaaagtccactgattccgtg
cttcgcaccactgaggcaaagacaaagtcatctacgtcctgctctgcttcaggggcggcc
acgtgtgaacgtggtgaccaggaaacagacgaaatgactggcagtggtgagctgagagct
gccctactggatgatgactctccagattttgctaacccatcctccttcaatgtcacacta
ctagactggatcaatgttcaagacagacccaacgatgtggagtcggttgttaggaaatgc
ttagattccatcagtcggcttgacccacggatcattcaacccttcctggcagattgcagc
gaaacaattgccaagctggataatcaaaacatgaagtccatcaaggggcttgaggacagg
ttatacgctctagaccaaatgattgaaatctgtaacaagttggtgaatgaacaaaaagag
cttgctcagggatttttggccaatcagaagcgggctgaaaacctgaaggatacatctgtt
ctgcctgacttgtgtctgagtcacaccaaccagctgatgatcatgttgaacaaccacagg
aagctgctagaaatcaaaaagaagtgcactactgccaaacaagaacttgcaaacaacctt
caagtcagactcaaatggtgctgctacgtgatgcttcacgcagaccaggacagtgagaaa
cttctggctctactcaaacttctgatggagctgaaggaaagagttaaagtcgtcgaggcc
ctcagtactgcgccccagatgtactgcttggcggtggtggaagtcgtcaggaggaaaatg
tttatgcaccactacaaagagtgggcttatgcgcttgtgaaggatggggaacagctatac
gaggcagaaaaactgaaaaggaaatcttttgggaaactctttaggaaatctttcctcaaa
aatagtttatttcgaggacttgaatcgtggccttcatcgtcattctgcacacaaaggccc
agagggtttgatgatgaacttccagacatctcccttgaggatctgcagtacttgaaatct
tgttgtcctttagaggtccagcctttcctcatgattcctacaatgtgtgactttgaaccc
ttaaatcgtcacgtaaactcccttcaccagctggtccaagcagcacagagtgtggatgag
atgtcccaaactataaccaacttgttaagtgaacaaagggcatcctgttgtcagagcacc
ccacagtctgaaagtataccagggagcctggtgtcctccaaaactcctgcctcccttagc
cttcatggacccagctgccaacctcttcatgtcccagtcccagctcctctagaggacttg
tccccagacagcatcgatgcacaaacatttgattttgaaaccattggtcatccaaacatg
gatccagtcctgcaacagggctcccttgacctggattctctagcagagagccctgaatct
gacttcatgtcagctgtcaatgagtttgtgattgaagagaacctgacctccccgaaccct
atcagtgaccccactagccctgatatgatggtagagtcactgtactcttcagtgatcaat
gctatcgaccataagcgcatgcaggacaccacaacactagagagggagaatttaaggatc
actgtccttaaacaagtcattgataagtaccagtccgctgtagaggagtcacaatccaac
ttgaagagtgtgaaggatgacctccatcacttacgaggtcttgcgttaaaagagcagcat
gacttttgcttcgtcctgaagtatacgaccacacaggtgtgcaaaattgtggacaacttc
tgccacactcatgaacttaagtttaaggagcagcatcaaagtgagcttctctctgttcgg
caagacctggagaagcagattgaaacactaacgaaggaaaaccaagtgaatcagaatatt
gttagagatgtccagcgtgcaatgcttgatttagaggggctcatggagcgcaaagaaaaa
gaactcactcagcttgagaatgagaaagagcgatggcttgaaatggagagcaacctcaca
gatcggatcacaaatctggagcaggtgatcagtgatcaagctgaagagatcaaagtggtc
tcagctgctagagactccctgaccagtcagattgagaatctgcactttgagattgaacgt
agccagcagaggattcgacaggagatggaagaagttatgcaatctaacttaaaggagctg
gaagtcaaaatggagcaggaacacaaggaagaactggagactcttaccgggaacaatcag
gaggctttggaacatctggctgctgaaaatagtgcaaagttaagtgaggctgcagatcac
catgccactgttctcggagagaaggacaaccaaatcaaggacttggaagcacgcgttaca
gagcttgcagaactccgctgcaaagtggaagtggagcttgccttcagagagtcggagacg
gaagcagtgaggctcttatttgaggaggccaagattcagcagtctgaggctgtgaagtct
caggtagaagctgagaccaaagcccttagcctcgagttagaaaatgtaaaacaacagctt
caggctaaaaatgaggagtatgaagttgacctagcagaactgaggactctcatgaggatt
gagaaggaccactgcatctcagaactggtggacagacacgaggaagaaacagttttgttg
cgcaatgagatcttctctatgcagcagcaagcccaggacacagagaggaaccatgctgag
ctgcaagagcaacttaaacaggctgtagacctgcagcttgctctaaaagaagaaaaagac
aaggagttgaggagtttccaagaactggagcaagagctgaggactgtcatcaacaaagta
caggcagaaaatgacctgctctcgaaaaaagtagaacaggacagagaagcaagagagaaa
gatgaagaaaaacagtcagccaaggttccgccaccagatgcctttaaagagttggagcag
cagaaagaggagatggaaaagcgactgttagagaaaattcaacaacttgagactgagctt
catgagctccagtcctccaaaagtgacgaaggcctgcccctgcacgacgagggacataca
gatagcgcggcacctctgtctctggactcagcgctggaggagcggctacagcaggagagg
gcctccctgcagtcccagatggagctcctggagaagaagaagaatgaggaaatgcagaac
ctcaagacatcgctgattgccgagcagcagactaactttaacaccgttctaacccgagag
aagctgaagaaggagcagatcatcaatgatattactgaaaagttgcagaaagttactcaa
cagcaggaaaaggacaaagctctgatagagagtctgtctgaggaccgggcgagtgtcatg
caggagaagaaatacttggaagaagagcttaatcgtctgcgcagcacagcgctggtctcc
tctgccttcttctctccccacctgtcagctctggagatcacagaggctggaggagccaca
gccagagctctgcctgttgctggggcttgttcctctgagtccacgggtgacagcgacaga
ctggcttctgtagcaaccattcaagatgacgaacatgttgattcagcagtggaggccagc
atggtgactgtccacgacaacatcctaatgtcagaggagaagcagcggattctgctgctt
gagaggactttacatatgaaggaagaagaaaacaaacgcctcagtcagagactgatgtct
caaagcatgtcgtctgtgtcgtcacggcattcagacaaaatagccatcagagacttccag
gtaggcgatttggttctgatcatcctggatgaaaggcacgataactatgtgctgttcacg
gtcggtcccactctctacttcctccactcagagtctctcaccgccctggacctcaaacca
gcatcaggggcttcaagacggccgtgggtacttgggaaagtgatggagaaggaatattgc
caggcaaaaaaggcccagaacaggttcaaggttcctttaggaaccaagttctacagagtg
aaagctgttccgtggaacagaaaagtatag
DBGET
integrated database retrieval system
