Solea senegalensis (Senegalese sole): 122773161
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Entry
122773161 CDS
T07721
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04142
Lysosome
ssen04144
Endocytosis
ssen05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122773161
04142 Lysosome
122773161
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122773161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122773161
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122773161
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122773161
Exosome [BR:
ssen04147
]
Exosomal proteins
Proteins found in most exosomes
122773161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
122773161
NCBI-ProteinID:
XP_043887523
LinkDB
All DBs
Position
LG8:complement(18780278..18804906)
Genome browser
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDLADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRIWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHASDAWKEGQFKDIVTKVANVELYYKAIHFYLEIKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLN
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNVPVPPQQAYGYGYTAAAPGYTQPPQP
NFGYGM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatcctgccaatccgcttccaggagcacctgcagctccagaacctgggaatc
aacccagccaacattggattcagtactctgaccatggagtccgacaagttcatctgtgta
cgagagaaagtgggcgagcaggcccaggttgtcatcatagatttggccgatcccaacaat
cccatccgcaggcccatctcagcagacagcgccatcatgaaccctgccagcaaagttatt
gcccttaaagacgccgcaaagaccctgcagatcttcaacattgagatgaagagcaagatg
aaggctcacacaatgactgatgacgtgaccttttggaaatggatctccctgaacactgtt
gccctggtcacagacaacgcagtctaccactggagtatggagggtgactctcagccaatc
aaagtctttgaccgtcactctagcctggcaggctgccagattattaactatcgcactgac
gccaaacagaagtggctgctgctcattggcatttcagcacagcaaaatcgtgttgtcgga
gccatgcaactgtactcggtggacaggaaggtgtctcaaccgatcgaggggcatgctgct
gggtttgcacagtttaagatggagggcaacactgaagagtccactctgttctgctttgct
gtgcgaggacaggcaggaggaaaactgcacatcattgaagtggggaccccaccaactggg
aaccagccatttccaaagaaagctgttgatgtattctttcctccagaagcccagaatgac
ttccctgtggccatgcagatcagctcaaagcaagatgtagtattcctcatcaccaaatat
ggctacatccacctctatgacctggagactggaacttgtatctacatgaacaggatcagt
ggggagaccatttttgtcacagccccccatgagccgactgctggtatcattggagtcaac
aggaaaggacaggtgttgtcagtgtgcgtggaggaggaaaacatcattccctacattact
aacgtgctccagaacccagacctggctcttcgcatggccgttcgcaacaacctcgctggt
gctgaggagctgttcgcccgcaagttcaacaccctctttgcagcaggaaattactcggag
gctgccaaggtggcagctaatgcgcccaagggtatcctgcggactccagacaccatacgt
cgtttccagagtgttccagctcaaccaggccagacatctcctctgctccagtactttggc
atcttgctggaccaaggccagcttaataagtttgagtctttggagctgtgcaggccagtc
ctccagcagggccggaagcagctactagagaagtggctgaaagaggacaagcttgagtgc
tctgaggagcttggagacttggtgaagtctgttgatcctacactcgctctcagtgtctac
ctcagagccaacgttcccaataaggttattcagtgctttgcagagaccggtcagttccag
aagattgtactctatgccaagaaggtgggctacacaccagactggatctttctgctgagg
aatgtaatgcggatcagtccagagcagggacttcaattctcacagatgttggttcaggat
gaagagccacttgctgacattacacagatagtcgatgtgttcatggagtacaacctgatc
cagcagtgcacatccttcctactagatgccctgaaaaacaatagacccatggaaggacca
ctgcagacacgcctgctggaaatgaatctggtccatgcaccacaggttgcagatgccatc
ctgggcaatcagatgttcacccactatgatcgggcacatgtggcacagctgtgtgagaaa
gctggtctcctgcagagggcgctggagcactacactgacctgtatgacataaagcgtgca
gtggtgcatacacacctgctgaacccagagtggctggtgaatttctttggctccttgtca
gtggaggattctctggaatgtctgagggctatgctgtctgcaaacatccgccagaacctt
cagatctgtgtgcaagtggcgtccaagtaccatgagcagctcactactcagtccctcact
gaactttttgagtctttcaagagctttgagggtttgttctacttcttgggttccatcgtg
aacttcagccaggatccagaggtccactttaaatacatccaggccgcctgcaagacgggc
cagatcaaagaggtggagagaatctgcagagagagtaactgctatgaccctgagcgcgtg
aagaacttcctcaaggaagccaagctgaccgaccaactacctttgatcatcgtgtgtgac
cgctttgattttgtccatgacctggtcctttacctgtaccgcaacagcctgcagaaatac
attgagatctacgtgcagaaggtgaacccaagccgtctgcccgtcgtcattggtgggctc
ctggatgtagactgcgctgaggatgtgattaagaacctgatcatggtggtgagaggacag
ttctccactgatgaactggttgctgaggttgagaaaaggaaccgactgaagctgctgctg
ccttggttggaggctcgtattcatgaaggctgtgaggagcctgctacccacaatgctctg
gcgaagatctatatcgacagcaacaacaaccccgagcgcttcctgagggaaaacccctac
tatgacagccgtgtggtggggaagtactgtgagaagagagacccccacttggcctgcgtg
gcctatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgagaactcactt
tttaagagtctatcccgctaccttgtacgtcgtaagaaccctgagttgtgggcgagtgtg
ctgctggagaccaataactacagaagaccactcattgatcaggttgttcagacagctctg
tcagagacccaggatccagaggaggtgtctgtcacagtcaaggccttcatgaccgctgac
cttcccaatgagctcatcgagcttctagagaagattgtcctggataactccgtcttcagt
gagcacagaaacctgcagaatttgctcatcctgacagccattaaagctgatcggacacgt
gtcatggagtacatcaaccgtctggacaactatgatgccccagacattgcaaacattgcc
attagcaatgagctttttgaggaggcctttgctatttttagaaaatttgatgtcaacacc
tctgctgttcaggttctgattgagcacattggtaacttggaccgagcttatgaatttgct
gagcgctgcaatgagccaccagtgtggagtcagctggcaaaggcacagcttcagaagggt
cttgtcaaagaagccattgactcttacatcaaggctgacgacccctctgcttatatggaa
gtgggacaagctgcagcccaaagtggaaactgggaggacctggtgaagtttctgcagatg
gcccgtaagaaggctcgggagtcatatgttgaaacagagctgatctttgccctggctaag
accaaccgcctggctgagctcgaggagttcatcaacggacccaataatgctcacattcag
caagtgggtgaccggtgctatgacgagaagatgtacgaggcagccaaactgctttacaac
aatgtgtccaactttggccgtctggcctctactctggtccacctgggagaatatcaggca
gctgttgatggagcccgcaaggccaacagcacccgcatctggaaggaggtgtgttttgcg
tgtgtagatgggaaggagttccgtcttgcccaaatgtgtggcctacatattgtcgtccat
gctgatgaactggaagaactcatcaactactaccaggaccgtggttactttgaagagctg
atcaccatgctggaggctgctctcgggctggagcgtgcgcacatgggtatgttcaccgaa
ctggccattctctactctaagtttaagccccagaagatgagggagcatctggagcttttc
tggtcccgtgtcaacattccaaaggttctcagggcagcagagcaggcccacctgtgggca
gagctggtgttcctctacgacaagtacgaggagtatgacaatgccatcatcacgatgatg
aatcacgcatctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggcc
aacgtggagctgtactacaaagccatccacttttatctggaaattaaaccactattactg
aatgacctgctcattgtcctctctccgagactggaccacacgcgcgctgtcaacttcttc
agcaaggtgaaacaactgcctctggtgaaaccttatctcaggtctgtccagaatcacaac
aacaagtcggtgaatgaggcactgaacaacctcttcattattgaggaagactatgcggcg
ctgcgcacatccatcgatgcgtatgacaacttcgacaacatctctctggctcagggcctg
gagaagcacgagcttatcgagtttaggaggattgcggcctacctgttcaagggcaacaac
cgctggaaacagagtgttgaactctgcaagaaggacaagctctataaggatgctatgcag
tatgcatcagagtccaaagacacagagcttgcagaagagctcctggcttggttcctgaac
gaagacaagaaagagtgtttcgccgcctgtttattcacctgctacgacctgctgcggccc
gatgtggtgctggagacggcctggcgacacaacatcatggacttctccatgccatacttc
atccaggtcatgagagaatatctgagtaaggttgatgcgataaaggaaaaggtggacaaa
cttgaagcctccgagtccctgaggaaacaggaggagcaagccacagagtctcaacctatt
gtttacggcacaccgcagctcatgctcacagcagggcccaatgtgcctgtgcccccccag
caggcctatggttacggctacacagcagcagcaccgggctacacccaaccgccacagccc
aactttggttacggcatgtga
DBGET
integrated database retrieval system
