Solea senegalensis (Senegalese sole): 122773270
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Entry
122773270 CDS
T07721
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04270
Vascular smooth muscle contraction
ssen04625
C-type lectin receptor signaling pathway
ssen04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122773270 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122773270 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
122773270 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122773270 (arhgef12a)
Membrane trafficking [BR:
ssen04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122773270 (arhgef12a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
DUF641
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
122773270
NCBI-ProteinID:
XP_043887745
LinkDB
All DBs
Position
LG8:12703030..12737264
Genome browser
AA seq
1430 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKSSLLSNEFDPTEALVVQKSGSSS
VLAEGRPESCGLVQRCVIIQRDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLTEAESEMVGISISSPNSPAT
ERPYSPQGRLSSTHAPWDENSIQKVDTLQKMQELQAMKEEYSKNPSPKLLKDIQEANKHI
PRLQGQLFKATGATQEAVPGGDTDDGSMFESQHTLTSKADNSTDMSSWSSTPLSHRFGPG
SPASIFPRETSGLSPKSTPRNSFNSCHSPEAEDTTDLDSVSPTTVNSPSSRLVSQIIGAE
DDYFDSDQEQTNGQCNSFNSIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYADFYKQTN
SKETRRVFMDLHNFFIDRGANLKVAVPESVSADLDRRRTELIPEEINRQHVQTLQDSLLL
DIQKNLEDFRQKRSMGLTVAEGELTKLDQEQVPLERERSYAENIITKIEDILLTTQTTEE
EKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKIQKIIKSEEEKVKKPRFPS
ILGPQRRPSRIEAGPVGKALEGRPRPQKQLSQPILGTSEHTETSRLRGSQSSEGSELTHS
MSVNTSSPNSTTCSSDTSRDADTGGTPTSGPHRLSDGLQSDSLDGLPYPVAHNDLYSLDQ
LQEDDRESDKVHEGTPKALRRLEGLGPADVQSEDDQGTDSEHDPPNWQQLVGREVLAGLR
PHEIKRQEVINELFYTERAHVRKLRVLDHVFYQKLSKEAILPPADIKNIFSNLEEILQLH
VSVLEQMVAVRKRNESSVIDLIGDDLLSWFSGGEEEKIKQAVGTFCSNQPFALEIIKTKQ
KKDSRFSSFIQEAESNRLCRRLQLKDIIPVEMQRFTKYPLLLENIAKYTDNTVEKDKVKQ
AADCCRKILNHVNHALKVSEDKQRLEDYQRRLDLSSLKQTDNPMILELKNLDLTKKTMVH
EGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTADTKHIFSPIIKL
NTVLVRSVATDNKSFFVLSMSENGAQIYELMAPTVADQRTWQGLIIQRADAMKVKPHNII
PLPQSDGDRDGVEIIPAGVSRLSRDADRTSTGSTQSTDKESSSPASRSAMQSSLSGNNPF
ESVKAAEEEEEEGFVDPELPYQVAEDCRGGDSFNAFPSRADEALKTLAALKQVLVTQLMS
QEAAEQSNRSTGARLLRTTSLRTPIDSRSRVMVHNGSEKNSCQTEDPVQDLGSGDTGFFD
SPDDYAGYLVLEGYSGPGESSTDDDILASATGKQLRTSQGCAADSGINLRFSSTSQAGSL
SSFSRQVLSHLRNLQSNLNYLKEVEAKYNNLIRQRPDRPTADTDGNKDKR
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtctagcttcactgacaggtttcccaagaaagcgaacagaaccagc
agcattctcagtaaagaccatcccccagacaagaaacccaaaagtgacaaatcctcactt
ctctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaggcctgagtcctgtggtctggtccagcgatgtgtaatcatccag
agagatgaaaatggctttgggctcacggtcagcggtgacaacccagtatttgtgcagctt
gtcaaagaagatggggctgctatgcgagcaggtgttcagacaggagacaggatcatcaag
gttaacgggactcttgttacacattctaatcacatagaagtggtgaagcttatcaaatcg
ggctcctatgtggccctcacagtgttggggcgccctccagggctcgcccagatccctctg
actgaagctgagtctgaaatggtgggcattagtatttcttctccaaactctccagcaaca
gaacgcccgtacagtcctcagggcagactctcttctacacatgcaccatgggatgaaaat
agcatccagaaggttgacaccttgcaaaagatgcaggagttgcaggctatgaaggaggag
tacagcaagaacccctcccccaaactactgaaagacatccaggaagctaataaacacatt
cctcggctgcagggtcagctcttcaaggccactggggcaacacaggaggctgttccaggt
ggtgatacagatgatggtagcatgttcgaatcacaacacactctcacctccaaggcagac
aacagcacagacatgtcctcctggagcagcactcctttatcccacagatttgggcctgga
tctcctgccagtatttttccaagagagacatctggcctcagcccaaagagcacacccagg
aacagcttcaattcctgtcactccccagaggcagaagacaccacggacctggactcggtg
tcccctaccacagtcaacagtccctcttcccgacttgtctcacaaatcattggagccgag
gacgattattttgattcagaccaagaacagacaaatggccaatgtaacagctttaacagc
attgaacagctcaagtcccggcctgcccaccttgcagcctttcttcaccatgtcatctct
cagtttgaccctgctcctgtgctgtgctacctctatgctgacttctacaagcagaccaac
tccaaagagaccaggcgggtgttcatggacctccacaatttcttcattgaccgaggagca
aatttgaaagttgctgttcccgaatccgtctctgccgatcttgaccggcggcggacagag
ctgatcccagaggaaataaacagacaacatgttcaaacactgcaggactctctgctcctt
gacattcagaagaaccttgaggatttcaggcagaagcgcagcatgggtctaacagtggct
gaaggagaactgaccaaactggaccaagagcaagtccctctggagcgagagcgttcatat
gctgaaaacatcatcaccaagatagaggatatcctattaactactcagaccacagaggaa
gagaaatgcactacaatgcagtatgtcatctatacatacatgaagcaccttggagtgagg
gtcaaagaacctcgcagccttgagtccaaacgggtccggataaactttctccccaagatc
aagatacagaaaatcataaagtcagaagaagagaaggtgaagaaacccagatttcccagt
atcctcggaccccagcgtcggccaagccgcattgaagcggggccagtgggtaaagccttg
gagggtcgcccccgtcctcagaaacaactatcacagcctatactggggaccagtgaacac
acggaaacaagtcgtttaagaggcagccaatcgagcgagggctctgaactcacgcactcc
atgtctgtcaacacttcatcgccaaacagcaccacctgcagctcagatacgagtcgagat
gctgatacaggtggaactccgacctcaggcccacacagactaagtgacggccttcagtct
gactccctggacgggctgccataccctgttgcgcacaatgacctttacagcctggaccaa
ctgcaagaggatgacagagaaagtgacaaagttcacgagggaacaccaaaagccttaaga
aggcttgagggactgggtccagctgacgtccagagtgaggacgaccagggaacagactct
gagcatgatccgccgaactggcagcagctggtggggagagaagtcctggccggtcttcgg
cctcatgaaataaagagacaggaagttattaatgagctgttttacacagagcgagcacac
gtacggaagctgagggttttggaccacgttttctaccagaagctctccaaagaggccatc
ctgcctcctgctgacatcaagaacatcttctccaacttggaggagattctacagttgcat
gtgtccgtactggagcaaatggttgcagttcggaagagaaatgagtcgtcagtaattgat
ctgataggagatgacttactctcttggttcagcggtggagaggaggagaagatcaagcag
gcagtggggacgttctgcagtaatcagccatttgctctggagatcatcaagaccaagcag
aagaaagactcaaggttctcgtctttcatccaggaggcagagagcaaccgactgtgtcgc
cggctgcagcttaaagatatcattcctgtcgagatgcagcggttcaccaagtatcctctg
ctactcgaaaacatcgccaagtacacagacaatacagtggaaaaggacaaagtgaagcag
gcggcagactgctgtaggaagatcctaaatcatgtcaaccatgctttgaaggtgtctgag
gacaagcagaggctggaggattatcagagaagacttgacctctcctctctgaagcagaca
gacaatcctatgatcctggagctaaagaacctggatctgaccaagaaaacaatggtgcac
gagggaccactgtcatggaaagtgaacaaggacaagactattgagttgtacactctcctc
ctggaggacatcctggttctgcttcagaagcaagacgagcgtctgatcctcaagtgtcac
agcaaaaacctggcaggcactgccgataccaaacatatctttagccccatcatcaaactc
aacacggtgctggtgcgctcagtggccacagacaacaagtcattcttcgtcctctccatg
tcagaaaatggagcccagatctatgagttgatggcacccacagttgcagaccagagaacg
tggcagggtctaattatccagagagcggacgccatgaaagtcaaacctcacaacatcata
ccattacctcagagcgacggggacagagacggagtggaaatcatcccagccggtgtttcc
aggctgagtcgagatgcggaccgcacatccaccggcagcacccagtccacagataaagag
agcagcagtccagcctctagaagcgcaatgcagagctctctatctggtaataatccattt
gagagcgtgaaggcagcggaagaagaggaagaggaaggttttgtggacccggagcttcct
taccaagtggctgaagattgcagaggaggagactcgtttaacgcgtttccctccagagca
gacgaagcactgaaaacattggcagcattaaagcaggtgttggtgacccagttaatgtcc
caggaagctgcggagcaatccaatcgctccacgggggctcgtctcctcaggaccacctct
ctgcggacccctattgacagccgttcacgggtgatggtccacaacggctcagagaaaaac
agctgtcaaacggaggacccagtccaggacctgggctccggggacacaggctttttcgac
tctcccgacgactatgcaggatacttggtcctggagggttacagtggcccaggagagagc
agcacagatgatgacatcttggcatccgccacagggaagcagctgaggacctcacaaggc
tgtgccgcagactctggcatcaatttgaggttttcttccacatcgcaggccggcagcctc
tcctctttcagcagacaagttctgtctcacctcagaaaccttcagtccaacctaaactac
ttgaaggaggttgaggccaagtataataatctaatacgccaaaggccagatcggccaaca
gcagacacggacggaaacaaagataagagatag
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integrated database retrieval system
