Solea senegalensis (Senegalese sole): 122773279
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Entry
122773279 CDS
T07721
Symbol
sars2
Name
(RefSeq) serine--tRNA ligase, mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122773279 (sars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssen01007
]
122773279 (sars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122773279 (sars2)
Enzymes [BR:
ssen01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
122773279 (sars2)
Amino acid related enzymes [BR:
ssen01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122773279 (sars2)
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122773279 (sars2)
Prokaryotic type
122773279 (sars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NAS
SKA2
Pox_A_type_inc
Sec8_N
DUF7342
DUF4407
Motif
Other DBs
NCBI-GeneID:
122773279
NCBI-ProteinID:
XP_043887761
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All DBs
Position
LG8:complement(23580006..23606361)
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AA seq
538 aa
AA seq
DB search
MATLISMVVTVRNTGHSVLKTLWRSSVLMKLQRYCHGARSSLYEHVREGYSDKPELDMRA
VCEHTDKVRANVENRKGDLCADDVDKIVCVWQELQALRTEISELENLKKRISDSVRTLVN
NYDKKILANLSEYTRALQEGREIRNRLNQLCAKETELDQEHYIQALRLPNTTHPDVPVGD
ESQARVVELVGRRPEFDFKPRGHVQLGEELGLIRQRHLAHVSGHRSYYLRGAGARLQTAL
QNFALDTLQQQGFIPMVVPDMLKGAVFEGCGMQPNAHRSQVYSLDPARFPDLNLAGTGEV
GIAGYFMDHAVNWRDLPVRTVCSSTCYRAETDTGREAWGLYRVHHFNKVEMFGVTADETG
EESAQLLDEFVSLQKGMFSALELHYRVLDMPTQELGPPAHRKYDIEAWMPGRNSFGEISS
GSNCTDYQSRRLNILYEREDGSLQYAHTVNATACAIPRMIIAILETHQTKDGAVRVPKAL
QPYLGLNVIEKPSHTALKYMGPNQHSRPRRPDQIRPDQRAQHQTPTNAGFLDKKCTHC
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttgatcagcatggttgtgactgtgagaaacaccggtcactctgtgttgaag
acgctgtggaggagcagtgtgttgatgaaactgcagcgctactgtcacggagcccggagc
agtttatacgaacatgtccgtgaaggttacagcgacaaacccgagctggacatgagagct
gtgtgtgagcacactgacaaagtcagagctaatgtggagaacaggaagggggacctgtgc
gcagacgatgtcgacaagattgtatgtgtgtggcaggaacttcaggcactgaggacagaa
atctctgagttggagaacctgaagaaacgcatcagtgactcggtcagaacactagtgaac
aactatgacaagaaaattctggccaatctctcagagtacacccgtgctctacaggagggt
cgagagatccgcaacaggctcaatcagctctgtgctaaagagactgagctggatcaggag
cattacattcaagcgctcaggctgccaaacaccacacaccctgacgtgccagttggagat
gagagccaggcaagggtggtggaactggtgggacggagaccagagtttgacttcaagccc
aggggccatgtacagctgggggaggagctgggtctcatcaggcagaggcatttagctcac
gtctcaggtcacaggtcatactatttgaggggagcaggagccaggcttcagactgcgctc
caaaactttgccctcgacacactgcagcaacagggcttcatccccatggttgttcctgac
atgctgaagggggcagtgtttgagggttgtgggatgcagccgaatgctcaccgttcacag
gtctactccctggaccctgctcgcttcccagacctcaatctggctgggactggggaggtt
gggatagcaggctatttcatggatcatgcagtaaactggagggacttgcctgtcagaacg
gtgtgcagtagcacctgctacagagcagagaccgacaccggcagagaggcgtggggtctc
tacagagttcatcacttcaacaaggtagagatgtttggagtgactgcagatgagacaggc
gaggagagcgctcagctgctagacgagtttgtgtcattgcagaaagggatgttctctgct
ctggagctgcactacagagtgctggacatgcccacacaggaactgggtcctcctgctcac
aggaagtatgacattgaagcctggatgccagggaggaacagctttggagagatttccagt
gggtctaactgcacagactaccagagcagacgcctcaacatcctgtatgagcgtgaggac
ggcagcctgcagtacgctcacacagtaaatgctacagcatgtgccatcccacgaatgatc
atcgccatcctggagactcatcagaccaaagatggggcggtgcgtgtcccaaaagctctg
cagccatatttaggtctaaacgtgatcgagaagccgtcacacactgcactgaaatacatg
ggacccaaccagcacagtcgaccacgcagaccagaccagatcagaccagaccagagagct
caacatcaaacacccacaaacgcaggctttctggacaaaaagtgtacacattgttaa
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