Solea senegalensis (Senegalese sole): 122773290
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Entry
122773290 CDS
T07721
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03266
Virion - Herpesvirus
ssen04514
Cell adhesion molecule (CAM) interaction
ssen04517
IgSF CAM signaling
ssen04520
Adherens junction
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
122773290 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122773290 (nectin1b)
04517 IgSF CAM signaling
122773290 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122773290 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122773290 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122773290 (nectin1b)
04090 CD molecules [BR:
ssen04090
]
122773290 (nectin1b)
Cell adhesion molecules [BR:
ssen04515
]
Immunoglobulin superfamily
Nectin family
122773290 (nectin1b)
CD molecules [BR:
ssen04090
]
Proteins
122773290 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
I-set
ig
Ig_PVRIG
Sema4F_C
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
122773290
NCBI-ProteinID:
XP_043887783
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All DBs
Position
LG8:7656433..7799086
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AA seq
548 aa
AA seq
DB search
MAMCVGMWILLLALHIHGGNGQMVQMDPSKSGFVGSQVELRCIFINSNPPVKISQVTWQK
FLNGTKQNVAIANPALGVSVLPPFKERVSFKQAAVRHRTPSLEDTTIVFSNLQLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPMTRLSLTTPTIVARGQKRKMTVATCVSANGKPPSVI
KWETRLKGEATFQEVRNQNGTVTIRSNYVVIPSRETHKQKLTCIVTYREERITDSVVLNV
QYEPDVKIEGFDGNWYLNRQNVQLTCRADANPPVTVYQWKLLNGSLPTNVEIKNNTLFFK
GPVTYDLAGTYVCDATNGIGTRTGSVDLNITEKPMAQGPPGGVIGILGGVVAIGLIIGVA
VTVFMVHRRQQKTRTETDNDLIAVAAVADSCVTQAPEKPESPTRTDLPPAHKPAPPPPKK
KNCDMKGHLTSDDIQVVHLDKDEEMQKLPLQPPYYDMAPSESTPFTDKQDSGRRPEELLN
PAEYVNYERVCNMEHLPDSKPATTYPPVTFLPQHPYTQQPSMEPVYSNTSYAGPGPRAPP
MFPKEQSV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtgcgtggggatgtggatactcctgttggcgctgcacatccacggtggcaat
ggacaaatggtacagatggatcccagtaagtccggatttgtgggttcacaagtggagctg
cgctgcattttcatcaacagcaaccccccggtcaagatctcccaagtcacctggcagaag
ttcctcaacggcaccaagcaaaacgtggccatagccaacccggccctcggcgtgtccgtc
ctgccgcccttcaaggagcgggtcagcttcaagcaggccgcggtgcgccaccgcacgccc
tcactggaggacaccaccattgtgttctccaacctgcagctgtccgatgaagcggcctac
atctgcgagtacaccacgttccccgccggcaacagagagaacatggtcaacctcactgta
tttgctcgtcctatgacacgtttgagcttgacgacgcccaccatcgtggctaggggtcag
aaacgcaagatgaccgttgccacgtgtgtgtcagccaatggcaaacccccgagcgtgatc
aagtgggagaccaggctgaagggcgaggccactttccaggaggttcgcaaccaaaacggg
acggtgacaatacgcagcaactacgtggtgataccgagccgcgagacccacaagcagaag
ctcacgtgtatcgtgacgtaccgggaagaaaggatcacggacagcgtggtgctcaacgtc
caatatgaacccgatgtaaagattgaggggtttgatggaaactggtacctgaaccgtcag
aacgttcagctgacctgcagggctgacgccaacccccctgtcactgtctaccagtggaaa
ctcttgaatggctccctgcccactaatgtggagatcaagaacaacaccctgttcttcaag
gggccggtgacctacgacctcgctggcacgtatgtctgcgacgcaaccaatggaattggg
acccgtactggcagcgtggatctcaacatcacagagaagccgatggctcagggtcccccc
ggtggtgttatagggatcctcggaggggtcgtcgccatcggactcatcatcggagtggct
gttactgtcttcatggtccatcggcggcagcagaagacccgcaccgagacggataatgac
ctcattgctgttgctgctgttgctgatagttgtgtgacacaggctccagagaagccagag
tcccccacaaggacagacctcccacccgcccacaaacctgcccctcccccgcccaaaaag
aagaactgtgacatgaagggacacttgacatccgatgacatccaggtggttcatcttgac
aaagacgaggaaatgcagaagcttcctcttcagcctccttattacgacatggcgccctcc
gagtcgacacccttcactgataagcaggactctgggaggcgtccagaagagttgctgaac
cctgccgaatatgtgaactacgagcgcgtctgcaacatggaacacctccccgactccaag
cccgcgacgacctaccctcctgtcactttcttgcctcagcacccctacactcagcaaccg
tccatggagcccgtgtactccaacacgagctacgcgggccccggcccccgagctccgccc
atgtttccgaaggagcagtcggtgtga
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