KEGG   Solea senegalensis (Senegalese sole): 122773337
Entry
122773337         CDS       T07721                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen00565  Ether lipid metabolism
ssen01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    122773337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssen03036]
    122773337
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssen04147]
    122773337
Chromosome and associated proteins [BR:ssen03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122773337
Exosome [BR:ssen04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122773337
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 LisH LisH_PAC1 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd Pox_A_type_inc DUF2570 ARMC9_LisH SutA-RBD LisH_2
Other DBs
NCBI-GeneID: 122773337
NCBI-ProteinID: XP_043887882
LinkDB
Position
LG8:13905998..13934126
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRNPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGILFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacaacgacaacgagatgaattaaatcgagcgatagcagattatctacgt
tccaatggatatgaagaggcatattccactttcaagaaggaggcagaattagataataat
gaagaattggataagaagtacgctggccttttggaaaagaaatggacctctgtcatcaga
ttacaaaaaaaggtgatggagcttgaatccaaactgaatgaagctaaagaggaaattacc
ctgggaggccctgtcagtcagaagcgcgaccccaaagagtggattccacgcccaccagaa
aggtacgcgctgagtgggcaccgcaatccagtcacccgcgttatcttccatccagtcttc
agtgtcatggtgtcagcatctgaggatgccacaataaaggtttgggactatgaaacagga
gactttgaacgtacactgaaaggccacacagattcggtgcaggacatctcttttgaccag
actggcaaactgctggcatcctgctctgcagatatgactatcaaactgtgggacttccaa
ggctttgaatgcatcaggaccatgcatggacatgaccacaatgtttcatctgtagctatc
atgcccaatggagatcacattgtttctgcctcaagggacaaaaccataaaaatgtgggag
gttgcaactggctactgcgtgaagaccttcacaggccatagagagtgggtccgtatggtg
cggcctaaccaggatggcacactgattgccagctgttccaatgaccagacagtgcgggtg
tgggtcgtggcctcaaaagagtgcaaagctgaactgcgggagcatgaacatgtggtggaa
tgcatctcctgggcaccagagagtgcccaccccaccatcctagaggccacaggctctgag
tccaagaagagtggtaagccaggacccttcctgctgtctggctccagagacaaaaccatc
aagatgtgggatgtaagcactggaatgtgccttatgacactggttggccatgacaattgg
gtgcgtggaatcctcttccaccctggtggcaagtttattgtgagctgtgcagatgacaag
actctaaggatctgggactacaagaacaaacgctgcatgaaaaccctgtgtgcccacgaa
cactttgttacctctttggatttccacaaggctgctccctacgtcgtcacagggagcgta
gatcaaacagttaaagtgtgggagtgccgctga

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