Solea senegalensis (Senegalese sole): 122773378
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Entry
122773378 CDS
T07721
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122773378 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ssen04091
]
122773378 (frem2b)
Lectins [BR:
ssen04091
]
C-Type lectins
Lecticans
122773378 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TMEM154
DUF6522
Protocadherin
Motif
Other DBs
NCBI-GeneID:
122773378
NCBI-ProteinID:
XP_043887951
LinkDB
All DBs
Position
LG8:complement(6608083..6675790)
Genome browser
AA seq
3118 aa
AA seq
DB search
MAWIIPPLLHGSGSALILLALILTGDAAAQVFDSYGLSYALRSELTEDTILVANNGIRVP
FGRSVFVDPINDLVIQVQPGDRCSITVLDSDPLSQRPGHLSPKKFPCEFGPNEVKYSHFG
SRSPPRDRVRLQLRYDTPTDTIIIPFMMEVEVIFTQLEVLTKNMPLTVERLLGTSNPIDR
RILEFTFDRRAQQCKIASLSSGSVLPRYGQLVDEDSLGTMVDCDEFIKMNIRYEHTFALK
SPSRDYIPMLVELHDKEGNLLKQEFFQILVRIKEGEENTAPKPSFVAMMMMEVDQFVMTA
ITMDMLAAEDVESKTDELIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLKDLKIAYKP
PAVDSDTERIFQIEFEVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPL
SSSQNLEISDEDNLDRVKITVIDGLRHGELTVLGSRRKFFTPADLDAGVVIYQHDGSDTY
SDNIIFRMTDGTNEVEFLFPITVVPTDDEAPIINANTGLILFKNQMLPISSLMLSAADID
SEDSTIKFTIGPPFSTIGQVLLRQSEAPADPSTWKFNTDDEMYEKAVTEWLQEDITDGKL
FYKHIGPHSSSTVMDQFVFRVQDDNDPPNQSGESAFIIKILPVDDLPPELYPGTTLQMTV
HEYQLTYFRKKFLHYTDLDSEDRDLRYTVVQPPTDTDENNPVVLGALVLTERPDTEVATF
TQAQINHHKIAYKPPDLELGITSHVLQFKYTVEDVSGNNMEGVFTIFLKPVDNKPPQITN
SGFTLLERGRHIITTAELYTSDTDTDSQQIVFTVTQPPLHGQMQFTFTGMTKGDTFKLED
IRNDRISYIHNGDESTTDSIQIDVSDGIHVVPITIKINVKPVDDETPTISLPAGTIGSYI
DVLENGATEITSNVIQGRDEDTDDLRLTFIVEDPPSLGEILVKGVPSGTFTQADIINGFV
VYAHTSGEVGFTTKEDFFNLTLTDMSDEWTVGGNKITGVRVHVTILPLDSQAPEIFVGPQ
FTVVEGEKNVIHILHIRADDVDTPYDDLLCTIIVQPTSGYVENISPAPGSEKSRSGTAIS
AFTIKDIRQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPISIIPSNDEKPEIY
MREFVVMEGMNIVIDTPILNGADADLPTDQLTFVISKPPKHGFILNQLTTGTVPVFNFTL
DQIREASSIVYEHDDSETTEDSFDVVLTDGKFSVEKTVIVMIIPVDDETPRMAINDGLEI
EIGDVKIVDSNILKATDLDSDDSTLTYIIRYGPGQGYLQKTTRSGTLQNITAGTNFTQND
LDQGLIVYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVVSKGVSLKEG
GRVTLTTDLLSTSDLNSPDEHLVFTITRAPTRGHLECTDAPGTPISSFTQLQLAGNKVYY
IHTSDDEMKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVVTVHGLVVTEGENKLITPF
ELTVEDRDTVDRLLKFTVTQIPVHGRLLFNNTRPVSSFTKQDLNENMISYKHDGTESAED
SFSFTVTDGTHTDFFVFPDTVFETRKPQIMKISVLPVDNGVPQIVVNKGAPTLRVLETGH
LGFVITSKTLKAEDRDSIQNAVTFRITVAPEHGYVINLSKGNATVTTFTQAEIDDMSICY
VLRDGDNATSDIFSFSIVDKGGNVLKNQQYRLNWAWISLEKESYVVDEGVKFLEVALKRR
GYLGETSFVSIGTKDGTAEKDKDFRGKSQRQVQFNPGQTTATWKVRILSDSEYEVSETFQ
IVLSEPVMAALEYPEVATVEILDPDDESTVFIPSAVYNIEEDIGELLIPVRRSGDVSHEL
MVICYTQQVSAKGTIPATVLSYSDYISRPEDHHSILRFDKGEAEKLCRVVVIDDSLYEDE
ESFNVSLSMPMGGRLGSEFPTAKITIVPDLDDAPVFYFGNTDYHVDESDGFVEVQVWRTG
TDLSKAGTVTVRSRKTEPVSAEAGVDYVGISRNLDFAPGVTMQTFRVTILDDLGQPVLEG
PEKFELVLRMPMNGILGEPSKATILINDSVSDLPKVQFRNAVYVGNEDSGKVSAVVYRSG
DISYRSTVRCYSRQGTAQVMMDFNERPNTDDSIITFLPGEIEKECVLLLVDDTEHEEEEE
LRLVLGSPKSESPFGASVGKQNETLVKIKDEADKAIIRFGGTKFSVNEPKESGQVSVVKI
PVLRVGDTSKVSVVRVHTKDGSATSGEDYHPISEEIVFRKGDTEHYVEVEVLYDGVREMR
EAFTVHLKPDENMVAETKMSKAIIYIEETNSMADVTFPSVPRVVSLLHYDDIGRTRDSVL
VAGYPVICVTACNPKYPDYDKTGSICVSENINNTLTRYRWLVSAPTSPDRVTSPMREVDF
DTFFTSSKLITLDSVYFQAGSRVQCAARAVNSNGDEGLELLSHIVSISVDEGMCQPRVSG
TVGAEPFSAKLRYTGGEDTGHPNLIKVTVTMPHIDGMLPVVSTRPLSNFELTLSPDGTRV
GHHRCSNLLDHTEVNTRYGFLTDATKNPEVIGETAPYQYSAALRGSSTLQFYRNLNLEAC
LWEFSSYYDMSELLSDCGGSIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQHFD
LQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINGQGRLVVNFRTEARFRGLF
VFAHPASPLTSMVMCPDHPGLTFNVSLVRSEPTYNQPIQQWTFVSDFAVRDYSGTYTVKL
IPCTSPPSLEYTIPPVCNPREPLTFDLDIRFQQVSDPVAAEFSLNTQMILLSKHTLWLSD
GSMGFGQESDTAFSPGDMIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYNPSNF
EFGCLADAPSLLYRFKIIDKAQPDTQARSFGSVAFNAHLAVDDPGALALVRQPGSDGFSM
DSSALFQVSTGREWYIHTIYTVRSRDNANRGIGKRSLEYHVLSQPTNHLPKTHRRTRRSS
SAVPELIEEIGVNNNRGTNILHIALDRSSQRRTSPEREIVTKGLVPHEVNQRDADGDDRL
VLMIGVFVGLLLTVLVVIVVALLVRSKRGKKDAPKTSSSSSAEPMMTRGLSNSDSSEV
NT seq
9357 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattatccccccgctgctgcacggctctggctcagctctgattctgctcgcg
ctgattctgacaggtgatgcggcggcgcaggtttttgacagctatggattatcttacgcg
ctgagatcggagctgacagaggacacgatactggtcgccaataacgggatccgcgtgcct
ttcgggagatcggtctttgttgatcccatcaacgatctggtgatccaagttcagcccggt
gatcgatgcagcataacagtgctggacagtgacccgctgtcccaacggcctggacacctg
tctcccaaaaagtttccctgtgaatttggccccaacgaggtgaagtactctcacttcggc
tccaggagtcccccgagggacagagtgagattacagctcaggtatgacaccccgacggat
accattattatacctttcatgatggaggtggaagtcatttttacgcagctggaagtacta
accaaaaacatgccactcaccgtggagaggctgctcggcacaagtaatcccattgataga
agaattttagaatttacctttgatagaagagcacaacaatgcaaaatagcttctctttcc
agtggcagtgtgttgcccaggtatggccaactcgtggatgaggacagcctgggaacaatg
gtggactgtgatgagtttattaaaatgaacatccgttatgagcacacttttgctttgaag
tcaccaagccgagattatattcccatgcttgtggagttacatgataaggaaggcaatttg
ctcaagcaggagtttttccaaattttggtccggattaaagagggagaggagaacacggcc
cctaagcccagctttgtggcaatgatgatgatggaggtcgaccagtttgtaatgaccgcg
ataaccatggacatgctggccgcagaggatgtggagtctaaaactgatgaattaattttc
aacatcacatccccgctctcctttgaggagggctacatagtgagcacggatgataggaat
ttaccaatcacctcgttttatcagggggacctcaaagacttgaaaatcgcctacaaaccc
cctgctgtggattcagacactgagcggattttccagattgagtttgaggttgtggacaca
gagggggcagtgtccgatccttttgctttcatgattgttgttaagccaatgaacacgtta
gcccctgtggtgacgagaaatactggtcagttactctatgagggtcagtccagacctctg
tctagctcacagaatttggaaatcagcgacgaagacaatttagatcgagtcaaaatcact
gtcattgatgggctgaggcacggagagttaactgttttgggctcaaggaggaaatttttc
accccagctgacctagacgctggagttgtcatttatcaacacgatggcagcgacacgtac
agtgataatatcattttcagaatgacagacggcacaaatgaggtggaatttctgtttccc
atcactgttgtgccgaccgatgacgaggctcccataatcaacgctaacactggtttgatt
ttgttcaaaaaccaaatgttgcccatctcctctctcatgctcagtgcagcagacatcgac
tcagaggattctacaattaaattcacaatagggcctcccttttctacaattgggcaggtg
ctgctgcgtcagtctgaggccccggcagacccatcaacatggaagtttaatacagacgat
gaaatgtacgagaaagcagtgactgaatggctgcaggaggacattaccgacggcaaactg
ttttacaagcacattgggccccacagcagcagcactgtaatggatcagtttgtgtttaga
gttcaagatgacaatgacccaccaaaccaatcaggcgagagcgcattcattatcaaaatc
ctccctgttgacgacctcccacctgaactctaccctggcacgactctgcagatgactgtg
catgaatatcagctcacgtacttccgaaagaaattcctacattacacggacttggactcg
gaggaccgggacctgagatacacagtcgtccagccaccgaccgacacagatgagaacaac
cctgttgttctgggagctctggtgttaacagagaggccagacacggaggtcgcaactttc
acacaggcacaaattaaccaccacaaaatagcgtacaaaccacctgatctagagctcgga
attacctctcacgttttgcagtttaagtacactgtggaggacgtttctggaaacaacatg
gagggggttttcactatatttttaaagcctgtggataacaagccgcctcaaataaccaat
tctgggttcactctgctagaacgtggtagacatatcattacaacggctgagctttacacc
tcagacacagacacagacagccaacagatagtattcactgttacgcagccgccactgcat
ggtcagatgcagtttacatttactggcatgacaaagggggatactttcaaactagaggat
attagaaatgacagaatttcgtacatccataatggggatgaatcaacaactgattcaata
caaattgatgtcagcgacgggatccacgtcgtcccaattactataaagattaatgtgaag
ccagtggacgatgagactcctactatcagcctcccagctggcacaattggctcctatatt
gatgtgctggaaaatggagcaacagaaatcacgagtaatgtaattcagggacgagatgag
gacacggacgacctacgtttgaccttcattgttgaggacccgccgtcgttgggtgaaatc
ctggtgaaaggtgtcccttctggcacattcactcaagctgatattattaatggctttgtg
gtctatgctcatactagtggggaggtaggctttaccacaaaggaggactttttcaatctc
accctgacagatatgtctgacgagtggacagttggaggaaataagatcacaggtgtgaga
gtgcacgtaactattcttcctctggacagccaggctccagagatctttgtggggccgcag
ttcaccgttgtcgagggagagaagaacgtcattcatattcttcacatacgcgctgacgac
gtcgacaccccctatgatgacctcctttgtacaatcattgtacaaccgacatcggggtat
gtggagaatatctccccagcccctggctccgagaaatccaggtctgggacggccattagt
gctttcactatcaaggacatcagacagaatcacatttactatgttcaaagcattcacaaa
ggagtcgagccggtagaggacaggtttacattcagatgctctgatggcatcaatttctct
gagaggcactttttccccatctccataatcccctctaatgatgaaaagccagagatttac
atgagagagtttgtagttatggagggcatgaacatagtcattgatactcccattctgaac
ggtgctgatgcggatctccccaccgatcagctcacattcgttatcagcaaaccccccaag
catggatttattctcaatcagctcaccactggcaccgttcctgtctttaacttcaccttg
gatcaaatcagggaggcctccagcatcgtgtatgagcacgatgactcagaaaccacagag
gacagctttgatgttgttctcacagatggaaaattcagcgtggagaaaacagtgattgtt
atgattatccccgtggatgacgaaaccccaaggatggcaatcaatgacggacttgaaatt
gaaataggggacgtgaaaatcgtagacagcaatattttaaaagctactgatttggactct
gacgacagcacgttaacttacattattcgctacgggccaggtcagggatatttgcaaaaa
actacacgctccgggacgttgcaaaatatcacagctggaacgaacttcacgcagaatgat
ttggatcaaggtctgattgtgtacatccataacggacaagaggggatccgagacctcatc
aaatttgatgtgaccgatggcatcaacccattgattgacagatacttttatgtgacagtg
ggtggcattgacatggttttcccggacgtggtcagtaaaggtgtgtcccttaaagaaggt
ggcagggtcactctgaccacagacctgctcagcaccagcgatctcaacagcccagacgaa
catttggttttcacaatcacccgagctccaacgagaggccacttggagtgcaccgacgca
cctgggacacccatctcatccttcacacagctccagctggctggcaataaagtctactac
attcacacgtctgacgatgaaatgaaaatggacagctttgaatttgaagtaaccgatggg
tacaacccagtgttccgcacgttccgcatttccatcaccgacgtggacaacaaaaagccc
gtggtgacggtgcatggcctggtggtgacagaaggggagaacaagctcatcacgcctttt
gagctcacagtggaggacagagacaccgttgaccgcctcctaaagttcacagtcactcaa
atcccagttcatggtcgcctgctcttcaacaacaccaggcctgtctcctccttcacaaag
caggacctgaatgagaacatgatcagctacaaacatgatggcacagagagtgcagaggac
agcttctccttcactgtcaccgatggcactcacactgacttcttcgtcttccccgacaca
gtatttgagacaagaaagccccagataatgaagatttcagtcctcccagtggataacggg
gtgccacagattgtcgtgaacaagggcgcaccaactttgcgggtcctggagacgggtcac
ctggggttcgttatcaccagtaagacccttaaagcagaggacagagacagcattcagaac
gccgtcacctttaggattactgttgccccggagcacggctacgtgatcaacctcagcaaa
ggaaatgccacagtcaccactttcactcaagctgaaattgatgacatgagcatctgctac
gttctgagggatggtgacaatgctacaagtgacatcttctctttttccattgtggacaaa
ggaggaaatgtgctcaagaaccagcaataccggctgaactgggcatggatatctttggag
aaggaaagctacgtggtggatgaaggggtgaagttcctggaggtggcgctgaagcgtcgg
ggctacctgggggaaacgtcattcgtcagtatcggcacaaaggatggaactgcagaaaag
gacaaagatttccgggggaaatctcaaaggcaggtgcagttcaaccccggtcagaccacg
gccacttggaaggttcgaattctgtctgatagcgagtacgaagtctcggagacctttcag
attgttctgtctgagcctgtgatggcggcacttgaatatcctgaggtcgctactgtggag
atcctggaccctgacgatgagtcaacagtgttcataccctcggctgtgtacaatatcgag
gaggacattggcgagctgctgatccctgtgcgcaggagtggagatgtcagtcatgagctc
atggtcatctgctacacgcagcaagtctcggccaaaggcaccatccccgccacggtgctc
tcgtactctgattacatctcccggcccgaggaccatcacagcatcctgcgcttcgacaaa
ggagaggcggagaaactctgccgggtcgtcgtcattgacgactccctgtatgaagatgag
gaaagcttcaacgtctccctcagtatgcccatggggggacgtctcggctccgagtttccc
actgccaaaattacaatcgtgcctgacctagatgacgctcctgtcttctactttggcaac
acggactaccatgttgatgagagtgacggctttgtggaggtgcaggtgtggcggaccggg
acagacctttccaaagcgggaaccgtcactgtgcgttccagaaagacagagcctgtctcg
gctgaggctggtgtagattatgtggggatcagccggaacctggactttgcaccgggggtt
accatgcagactttccgtgtgaccatcctggatgacctgggccagccggtgctggaggga
ccggagaagtttgaactggtcctacggatgcccatgaatgggatcctcggggagccgagc
aaggccaccatcctcatcaacgactctgtctcggacttgccaaaggtgcagttccgcaat
gccgtgtacgtgggcaacgaggactcggggaaggtttcagccgttgtgtatcgcagtggt
gacatcagctacaggtccacagtacgctgctacagcagacagggcactgcccaggtcatg
atggacttcaatgagaggcccaacacggatgattccattatcaccttcctaccaggggag
attgaaaaggagtgtgtactgttactcgtggacgacacggagcacgaggaagaggaggaa
cttcgtcttgtgttgggaagccctaagagtgaatctccatttggagcgtctgtcggaaaa
cagaacgagacgctcgtcaagataaaggacgaagcagacaaggctattatcagatttgga
gggacaaaattcagtgtgaacgagccaaaggaaagtggacaagtgtctgtcgtgaagatc
ccagtgctgcgtgtcggagacacgtccaaggtgtctgtggtccgagttcacacaaaggac
ggatctgctacttccggggaagattaccatcccatatctgaggaaattgtgttcagaaag
ggcgacactgagcactatgtggaggtggaggttttgtacgatggcgtcagagaaatgagg
gaagcgttcactgttcacctgaagcctgatgagaacatggtggcggaaacaaagatgagc
aaagccattatatatattgaggagaccaacagcatggcggacgtcaccttcccctcggtg
cctcgggtggtttctctgctgcattatgatgacatcggcaggaccagagactccgtcctt
gtggctggatatcctgtcatttgtgtcactgcttgtaaccccaagtacccagactacgac
aaaaccggctccatctgtgtgagcgagaacatcaacaacaccctgacccgttatcgctgg
ctcgtcagtgcccccaccagccccgaccgcgtcaccagccctatgagggaagtcgacttc
gacaccttcttcacttcctccaaactcatcactttggactcggtctacttccaggctggt
tccagggtccagtgcgctgcaagagccgtgaattctaatggcgatgaaggtcttgagctc
ctcagccacatagtgtccatcagcgtggacgagggaatgtgccagcctcgtgtttcaggc
acagtgggggctgagcccttctctgccaagctgcggtacactggaggagaagacacaggc
caccccaacctcatcaaagtgactgtcaccatgccacacattgatggtatgctccctgta
gtgtccacacggcccctgtctaactttgagcttacactgagccctgatggtacccgcgtg
ggtcaccaccgctgctctaatctgctggaccacacagaagtcaacactcgctatggcttc
ctcacggatgccaccaaaaatccggaggtaattggtgaaactgctccgtaccagtacagc
gctgccctcaggggatccagcacactgcagttctacagaaacctcaacctggaggcttgt
ttgtgggaattcagcagctactacgacatgtctgagctgctcagcgactgcggaggcagc
attgggactgacggacaggtgctgaatctggtccagtcctatgtcacactgcgggtccct
ctccatgtgtcctacgtgttccactcccccgtgggagcaggaggatggcagcactttgac
ttgcagtctgagctgaggctcacattcgtgtacgacactgccatcttatggagggatggt
atcggtagcccaccggaggctgagctacaaggcgccctttacccaaccagcatgcgcata
aacggtcagggacgactggtggtcaacttccgcaccgaggctcgattcagaggccttttt
gtgtttgcacatccagcctctccgctcacctccatggtcatgtgtccggaccaccccggt
ttgacctttaacgtcagcctcgtgaggagcgagccgacgtacaaccagccgatccagcag
tggactttcgtgtctgattttgctgtgcgcgactactctggcacatacacggtaaagctg
atcccgtgtacgtcccctcccagcctggaatacaccatcccgcctgtgtgcaatccgaga
gagccgctaacctttgacctggatatacgctttcagcaggtcagcgaccccgtggctgcc
gagttcagtctgaacacgcagatgatcttactctcgaaacacacgctctggctctcagac
ggctccatgggctttgggcaggagagcgacactgccttctcaccgggtgatatgatatac
ggccgtgtgatggtggatccggtgcagaacctgggcgactccttcatctgtaacatagag
aaagtgttcctgtgcaccggagctgacggatacgtccccaagtacaaccccagcaacttt
gagtttggctgtttggccgatgctccgtcactgctgtacagattcaagatcattgacaaa
gcccaaccagacacccaggcccggtcttttggcagtgtggcgtttaatgcacacctggct
gtggacgaccccggtgctttagctctggtgagacaaccgggctccgacggtttcagcatg
gattcctcagctctcttccaggtgtctacagggagagaatggtacattcacaccatctac
actgtccgatcacgggacaacgccaaccgcggcatagggaagaggagcctggagtaccac
gtgctgagccagcccacaaaccaccttccaaagactcaccgtcgcacccggagatcaagc
agcgccgtgccggagctcatcgaggagatcggcgtgaacaacaaccgtggcacaaacatc
ctgcacatcgcgctggaccgcagcagccagcggcggacgagcccggagagggaaatcgtc
accaaaggactcgtcccgcacgaggtcaaccagagagacgccgacggcgacgacaggctg
gtgctgatgatcggcgtcttcgtcggtctgctcctcacggttctcgtcgtcatcgtggtg
gcgctgttggtccggtccaagcgcggcaagaaggacgcgcccaagacgtccagcagcagc
agcgcggagcccatgatgacacgcggcctcagtaacagtgacagctctgaggtttaa
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integrated database retrieval system
