Solea senegalensis (Senegalese sole): 122773415
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Entry
122773415 CDS
T07721
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122773415 (dhx34)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122773415 (dhx34)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
122773415 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
122773415
NCBI-ProteinID:
XP_043888034
LinkDB
All DBs
Position
LG8:complement(6867608..6877607)
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AA seq
1149 aa
AA seq
DB search
MDSDGRRDRWDWDSPHCRAQLDEVFFRKNDYIQTGSPEHREFWAFFDRFQRFKTKKDMCG
SVGARGRNGDRDEERKVKGKTAKVDLGLPVEYDARYRINVSVCTRDIEERVGKSEHRSRQ
RSSGPGDQEISDCRLALLHFLDFNQRQSFGKLAKLRREQKNLPIFQYQDKIVELVRRHPV
VVVAGDTGCGKSTQVPQYLLSAGFDYIACTQPRRIACISLAKRVSFESLNQYGSKVGFQI
RFETTRTIATKLLFLTEGLLLRQIQQDRTLAQYQVVIVDEVHERHLHCDFLLGVLRTLVA
ERPDLRLILMSATINIKLFSHYFSSAPVLQVPGRLFPIQVIYKPIPPEEQASRSEKLDPR
PYLRILQGIDQRYPPEERGDLLLFLSGVAEISTIQEACQVYATHTQRWIVLPLHSTLSLA
QQDKVFDISPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWI
SRASSEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDP
MSFVFIDPPPAASIQTAVTYLKEQGALDSHGELTSIGTLLSQLPVDVVIGKMLVLGSLFN
LVEPVLTVAAALSVQSPFLRSSQNNPDCATARQPLHSNQGDPFTLLNTFNAWVEVKGERG
GGSRKWCRRRGLEEQRLYEMVNLRRQFRDLLKSHSLLESEKNAASDGDRGQRRMRLTERK
KLHQLKRDHEQQEGSKRKVLKLEEGHDGDMSSGSDTEETSRRKKDKDGPGQNMDIQEVKF
KLRHNISELQEAVTVSQDMSSRHQALLKLLLCRGLYPQLAVPDEHNTNRKDSDQVFHTKN
KQGVVIHPTSVFASDPEVLLVPDDGVSELGSDRRDSSKHQLLAFVTLLETNKPYLSNCVR
VPALQALLLVANSMDSNADCARLVMDGWLEVELRQPEEASKLLSTALSLRGEWERLLLAQ
LGQSTEMRSAAQGVSRKTMEKLSDRLVRFLLYTEVSYSLRRLTAFQTQNLYIGPQPESEL
FQGKPPDLNSLFPGAEVKPHPIKGGLRVTSFFTYNCLADSKDLYSECLRTFWSCPNCDLY
MPLTPLERMQHEASCRPAGEQQQTGEEPAEGKPGPSSVSSLSRVYHCDVCNKDLTLTSTE
ILKHKRQHK
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggattcagacggaaggagagacaggtgggactgggacagcccgcattgcagagctcag
ctggacgaggtcttcttccgcaaaaatgactacatccagacgggcagcccggagcacagg
gagttctgggctttctttgaccgcttccagaggtttaaaacaaagaaggacatgtgtggg
tcggtcggagccagggggagaaatggtgacagggacgaagaaagaaaagtcaagggaaag
actgcaaaggtagatctgggccttcctgtggagtatgatgctcgctaccggatcaacgtg
tcagtgtgtacaagagatattgaggagcgagtaggtaagtcagagcacagaagcaggcag
agatcttcaggaccaggggatcaggagatctcggattgccgcctggctctacttcacttt
ctggacttcaaccagaggcagagttttggcaaactggccaagcttcgccgggaacagaag
aacctgcccatctttcagtatcaagacaaaatagtggagctggtgcgaagacaccccgtg
gttgtagtggctggtgacacgggctgtgggaaatccacccaagtacctcagtatctcctg
tcagccggattcgactacattgcctgcacacagcctcgacgaattgcctgcatctccctc
gcaaagagagtcagctttgagagtctgaatcagtatggatcaaaggttggattccaaatc
cgctttgagacgacacggaccatagccacaaaactgctgttcctcaccgaggggttgctc
ctgcgacagatccagcaggacaggactttggctcagtaccaggtagtgatcgtggatgag
gtccacgagagacaccttcactgtgacttccttcttggggtcctgcgcactctggtcgcc
gaacggccagacctgcgtctcatcctgatgtcggccaccatcaacatcaaacttttctcc
cactatttcagtagtgctcctgtgctgcaggtgccaggcaggctgtttcctatacaggtg
atttacaagcccattccacctgaagaacaggcctcacgttctgagaaactggatcccaga
ccgtacctgcgcatcctgcagggcattgaccaacgttacccgccagaggagcgcggcgac
ctgctcctcttcttaagtggcgtggcagagatttctaccatccaggaagcgtgtcaggtt
tatgccacacacacacaacgctggatagtgttgccgcttcacagcacgctctctctggct
cagcaggataaggtatttgacatctctcctcccggggtgagaaagtgtatcatctctacc
aatattgccgaaacctcagtgacaatcgatggtgttcgctttgttgtcgactcaggaaag
gttaaagaaatgagttttgatcctaaggccaaaatgcagcgtctgcaggagttctggatc
agcagagccagttctgagcagaggaaaggtcgagccggtcgcacgggtcctggagtgtgt
taccgtctttatgctgagtcagactatgacgcctttgcaccttatcccgttcctgaaatc
cacagagtggctctggactccctcattctccagatgaagagcatgggtctcggagatccg
atgtcttttgtcttcattgatccacccccagctgctagtattcagactgcagtaacttat
ctgaaagagcagggggcgcttgacagtcatggtgaactgacttctattgggacgttgctg
tcacagcttcctgtggatgtggtcatagggaagatgctggtcctgggctctttgtttaac
cttgtggagcctgtgttgactgtggcagcagccctcagcgttcagtcaccgttcctgcgc
agctcacagaacaatccagactgcgccactgcccgccagcccctgcacagcaaccaggga
gacccctttaccctgctcaatacctttaatgcctgggtggaggtaaagggggaacgagga
ggaggctcaaggaaatggtgccggaggaggggcttggaggagcagcgcctgtatgagatg
gtcaacctacgcagacagttcagggacttgctgaagagccacagcctgctggagtcggag
aaaaatgctgcctctgatggcgatcgtgggcagcgcaggatgaggctcaccgagaggaag
aagctgcatcagctgaagagagatcacgagcagcaagagggcagcaaacgtaaggtccta
aagctggaggagggccacgacggagacatgtcttcaggatcagacacagaggaaacgagc
cggcgcaagaaggacaaggacgggccaggacagaatatggacattcaggaagtgaagttc
aagttgcgtcacaacatatctgagctgcaggaggccgtcaccgtcagtcaggacatgtcc
tcgcgccaccaggccttacttaagctgctgctgtgccgaggactctaccctcagctggcg
gtgcccgacgaacacaacaccaaccgcaaggactcagaccaggtgtttcacacaaagaat
aagcagggtgtggtgatccatccaaccagtgtgtttgccagcgacccagaggtcctactt
gtcccagatgatggtgtcagcgaattggggtctgatcgtagggacagcagcaaacatcag
ctgctcgctttcgtcactctgctcgagaccaacaagccatatttgtccaactgtgtgcga
gttccagcgctgcaggccctgctgctggttgccaactccatggacagcaacgccgactgt
gcacgtctcgtgatggacggctggctggaggtggagctgaggcagcctgaggaggcatcg
aagctgctctccacggcgctctctctccggggtgagtgggagcgcctcctgctggcccaa
cttggacagagcacagagatgagatcagcagcccagggcgtgtcccgtaaaaccatggag
aagctgagcgatcgtctggtccgcttcctgctctacactgaggtcagttacagcctgcgg
cgactcacagctttccagacccagaacctctacatcgggcctcagcctgagtctgagctg
tttcagggcaaacctcctgatctgaactcactgtttccaggagcagaggtcaagccacac
cccatcaaaggaggcctgcgtgtcaccagcttcttcacctacaactgtctggctgactcc
aaggatttgtacagtgagtgtttacgcactttctggagttgtcccaactgtgacctttac
atgcctctaactccactggagcgcatgcagcacgaggcctcctgcaggccagccggagaa
cagcagcagacgggggaagagcctgcagagggaaagcccggcccgtcgtcggtgtccagt
ctcagcagagtttaccactgtgacgtctgtaacaaagacctgaccctcacctccactgag
atcctcaaacacaaaaggcagcacaagtag
DBGET
integrated database retrieval system
